Gene

KWMTBOMO11384

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744003_[Bombyx_mori]

Location

Bomo_Chr19(+):4525967-4526700      View in EpiBrowser

Full name

Tetraspanin      

Location in the cell

Cytoplasmic   Reliability : 1.469

CDS

ATGTGTTTGCACGGTAGCGACCGAAGAGGTCGGGTCTACAGGCAGCCTGAGGAGCGATTTGCGCAGTGCTCTTTCACTAAAACAGTGGCTTATGGGGGCGGCTCTTGTATGATGTGGGCCGGCATTTCCTTCGACGGTAAAACCGAGCTTGTTTTCGTGCCTGGCGGGGGACGAGGAGGCGGTCTAACTTCGAACCGATACATTTCCGATATTCTGCTGGAACTTGTCGTTCCCTATGCGGGATATACCGGTGATGACTTCCTCCTTATGGACGATAACGCTCGTTGTTACACTGCCCGTGTAACAACTAAATACCTCGAAGAAGTCGGTATCGCCACATTGGACTGGCCTGCGCTCAGTCCTGACTTCAACCCTATTGAGCACGTGTGGGATGAACTGAAGAGAACAGTTCGTTCCAGAACTCTTGCTCCTTCATGTCTAAATGAGCTGAAATCGGCGTTGATTGCGGAGTGGGAAGGTATCCCACAAGAATCAATTCAAAAGCTGACCAGGTCTATGAAGAATCGTCTTCAAGAGGTTATTAGGGCGAGGGGAGGGAACACAAAGTACTGA

Protein

MCLHGSDRRGRVYRQPEERFAQCSFTKTVAYGGGSCMMWAGISFDGKTELVFVPGGGRGGGLTSNRYISDILLELVVPYAGYTGDDFLLMDDNARCYTARVTTKYLEEVGIATLDWPALSPDFNPIEHVWDELKRTVRSRTLAPSCLNELKSALIAEWEGIPQESIQKLTRSMKNRLQEVIRARGGNTKY

Similarity

Belongs to the tetraspanin (TM4SF) family.

Uniprot

A0A2H1W7Z9   A0A437B3Y2   A0A2W1BPI3   A0A437ARL8   A0A437B338   A0A3P9NLT4   + More
A8C5I4   A0A1A7WG79   A0A2P8XLM9   A0A060YS83   A0A3B3C4K6   A0A3B3BTS0   A0A3B3BLR3   A0A3B3CHP7   A0A3B5QB47   A0A3P9QB88   A0A3B5QQ76   A0A3B3CSK6   A0A3B5R2Z8   A0A1A7YAS8   A0A3B3BAD7   A0A3Q3FZ92   A0A2W1BJ04   A0A060WIG2   A0A2W1C099   U3FVR2   A0A3B5B4E9   A0A3P8U4P3   A0A3B5QT88   A0A3B4DMX9   A0A3B3DMT7   A0A3B5REA1   A0A3B5QE26   A0A060WZK2   A0A3Q1CTM2   A0A3B3BMS0   A0A3P9PTW2   A0A3B4CPA3   A0A3B3C7G6   A0A3B3B9N3   A0A3B5PR17   A0A3P9QFR2   A0A3B5A2U8   A0A060ZHS7   A0A3B3RC03   A0A060WX74   A0A3B3BAG0   A0A060XHZ6   A0A3B5QMY4   A0A060ZBB1   A0A3B3QA75   A0A060VRW1   A0A437BTA9   D2A2Q9   A0A060ZEG9   A0A3B5KAA3   A0A3B3QX33   A0A060XIF3   E2AKN2   A0A060YFQ7   A0A3B5BL52   A0A3P8RUJ6   A0A060WNH7   A0A3B1IPN0   A0A060Z353   A0A3P9P6G5   A0A3B4DRB4   A0A3P8YCF0   A0A2A4J5V2   A0A060ZGV7   A0A3B3CYT8   A0A3B3D6L6   A0A060YT72   A0A3B4VAJ1   A0A3B3BB58   A0A3B3SXL2   A0A060WZ07   A0A2W1BF74   A0A3B3DEQ1   A0A060Z1P8   A0A060ZAN4   A0A060WG12   A0A060X6G5   R4FJ13   A0A3P9HL43   V5G1E7   A0A023F6N5   A0A060X263   A0A060XFH1   A0A3P9HNE3   A0A3B4C9Q9   A0A3N0XK83   A0A3P9HRI8   A0A087TYR8   A0A1B6IIZ1  

Pubmed

28756777    18021408    29403074    24755649    29451363    23542700    + More
23915248    29240929    18362917    19820115    21551351    20798317    25329095    25069045    17554307    25474469   

EMBL

ODYU01006928    SOQ49209.1    RSAL01000173    RVE45089.1    KZ150035    PZC74640.1    + More
RSAL01002207    RVE40551.1    RSAL01000182    RVE44907.1    EF685955    ABV31711.1    HADW01003134    SBP04534.1    PYGN01001767    PSN32920.1    FR918129    CDQ94591.1    HADX01005375    HADX01006576    SBP27607.1    SBP28808.1    KZ150024    PZC74838.1    FR904491    CDQ65039.1    KZ149928    PZC77493.1    GAEP01001740    JAB53081.1    FR904832    CDQ72427.1    FR965136    CDR01129.1    FR904804    CDQ71978.1    FR905186    CDQ76934.1    FR938374    CDQ98570.1    FR904289    CDQ57597.1    RSAL01000010    RVE53683.1    KQ971339    EFA02765.1    FR948558    CDQ99615.1    FR905160    CDQ76660.1    GL440336    EFN66011.1    FR910704    CDQ90586.1    FR904637    CDQ68666.1    FR924350    CDQ96159.1    NWSH01003130    PCG66904.1    FR961204    CDR00794.1    FR913091    CDQ92325.1    FR904707    CDQ70284.1    KZ150196    PZC72334.1    FR934058    CDQ97956.1    FR939895    CDQ98734.1    FR904534    CDQ66203.1    FR904864    CDQ72919.1    GAHY01002463    JAA75047.1    GALX01004626    JAB63840.1    GBBI01001820    JAC16892.1    FR904893    CDQ73307.1    FR905317    CDQ78348.1    RJVU01071404    ROI47935.1    KK117364    KFM70257.1    GECU01020821    JAS86885.1   

Proteomes

UP000283053    UP000242638    UP000245037    UP000193380    UP000261560    UP000002852    + More
UP000261660    UP000261400    UP000265080    UP000261440    UP000257160    UP000261540    UP000007266    UP000005226    UP000000311    UP000018467    UP000265140    UP000218220    UP000261420    UP000265200    UP000054359   

Pfam

PF13358   DDE_3        + More
PF01498   HTH_Tnp_Tc3_2
PF12796   Ank_2
PF00078   RVT_1
PF00335   Tetraspanin

Interpro

IPR002492   Transposase_Tc1-like        + More
IPR009057   Homeobox-like_sf       
IPR038717   Tc1-like_DDE_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR001523   Paired_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
IPR000477   RT_dom       
IPR000301   Tetraspanin       
IPR018499   Tetraspanin/Peripherin       
IPR008952   Tetraspanin_EC2_sf       
IPR012337   RNaseH-like_sf       

SUPFAM

SSF46689   SSF46689        + More
SSF48403   SSF48403       
SSF48652   SSF48652       
SSF53098   SSF53098       

Gene 3D

1.10.10.10     1.25.40.20     1.10.1450.10    

CDD

cd00204  ANK

ProteinModelPortal

A0A2H1W7Z9   A0A437B3Y2   A0A2W1BPI3   A0A437ARL8   A0A437B338   A0A3P9NLT4   + More
A8C5I4   A0A1A7WG79   A0A2P8XLM9   A0A060YS83   A0A3B3C4K6   A0A3B3BTS0   A0A3B3BLR3   A0A3B3CHP7   A0A3B5QB47   A0A3P9QB88   A0A3B5QQ76   A0A3B3CSK6   A0A3B5R2Z8   A0A1A7YAS8   A0A3B3BAD7   A0A3Q3FZ92   A0A2W1BJ04   A0A060WIG2   A0A2W1C099   U3FVR2   A0A3B5B4E9   A0A3P8U4P3   A0A3B5QT88   A0A3B4DMX9   A0A3B3DMT7   A0A3B5REA1   A0A3B5QE26   A0A060WZK2   A0A3Q1CTM2   A0A3B3BMS0   A0A3P9PTW2   A0A3B4CPA3   A0A3B3C7G6   A0A3B3B9N3   A0A3B5PR17   A0A3P9QFR2   A0A3B5A2U8   A0A060ZHS7   A0A3B3RC03   A0A060WX74   A0A3B3BAG0   A0A060XHZ6   A0A3B5QMY4   A0A060ZBB1   A0A3B3QA75   A0A060VRW1   A0A437BTA9   D2A2Q9   A0A060ZEG9   A0A3B5KAA3   A0A3B3QX33   A0A060XIF3   E2AKN2   A0A060YFQ7   A0A3B5BL52   A0A3P8RUJ6   A0A060WNH7   A0A3B1IPN0   A0A060Z353   A0A3P9P6G5   A0A3B4DRB4   A0A3P8YCF0   A0A2A4J5V2   A0A060ZGV7   A0A3B3CYT8   A0A3B3D6L6   A0A060YT72   A0A3B4VAJ1   A0A3B3BB58   A0A3B3SXL2   A0A060WZ07   A0A2W1BF74   A0A3B3DEQ1   A0A060Z1P8   A0A060ZAN4   A0A060WG12   A0A060X6G5   R4FJ13   A0A3P9HL43   V5G1E7   A0A023F6N5   A0A060X263   A0A060XFH1   A0A3P9HNE3   A0A3B4C9Q9   A0A3N0XK83   A0A3P9HRI8   A0A087TYR8   A0A1B6IIZ1  

PDB

5CR4     E-value=1.98912e-16,     Score=205

KEGG

101744003    no KO assigned | (RefSeq) uncharacterized LOC101744003

GO

GO:0006313   GO:0006355   GO:0015074   GO:0003677   GO:0016021  

Subcellular location

Membrane  

Length:

190

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.60296

Exp number, first 60 AAs:

3.49428

Total prob of N-in:

0.28976

outside

1  -  190

 

 

Pi

14.359632

Theta

18.795946

Tajima's D

-0.501238

CLR

0

CSRT

0.240937953102345

Interpretation

Uncertain