Gene

KWMTBOMO11376  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4445207-4450216      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.56 PlasmaMembrane   Reliability : 1.813

CDS

ATGGGAGAGTTTCTGTTCGATAAGTTTCAACCATTCCACTTCTACAAAGACTACGCGTTCGACTACGTAATACCGCCCGAGGGGGAGAGAGACGAATATATTGATTTCATCGACACACTTCCGCTCGCTAATACACCAGAAGTTTTCGGTCTGCATCCAAATGCGGAGATCGGTTACTTCAGCCAAGCAGTCCGCGAGATGTGGGGGCATCTCATTGAATTGCAGCCTCAAACGAGTGAGGCCGGGGGGGCCATGAGTCGGGAAGACTTCATCGACAACATCGCAGTGGACGTGCTCAGCAAGCTACCAACTCTGTATGAAATTTGGCGAGTTAGGAAACAGTTTGAGATGAACATCACTCCTACACTCGTTGTTCTTCTGCAGGAGCTGGAGAGATTCAACCGGCTAATCAGTCGTATGGGTAGCACTCTCTCGCTGCTCCGCAAGGCGCTGGCTGGTGAGATAGGAATGGATGCGGTGCTGGATAATGTCTCGTACAGCCTCTTCAACGGTCAACTGCCTCAAGTGTGGCGGGCTCTAGCCCCGGCCACTTGCAAGGGACTGGGGGGTTGGATGGACCATTTCATAGCCAGAACCAAACAATATACCGATTGGGCAACAGTGGAAGAACCAGTAGTCATTTGGCTCTCTGGTCTGCACATTCCGGAATCGTACCTGATCGCGCACGTCCAGATTGCTTGTCGCCTGTACACGTGGCCCCTGGACCGCTCTACACAGTTCACGAAGGTCACCAGCTGGGTATCGGCCGATGAAATTGAAGAACGACCTGTCACCGTAAGTTGCTATATACTTAATATTCTATTTTAA

Protein

MGEFLFDKFQPFHFYKDYAFDYVIPPEGERDEYIDFIDTLPLANTPEVFGLHPNAEIGYFSQAVREMWGHLIELQPQTSEAGGAMSREDFIDNIAVDVLSKLPTLYEIWRVRKQFEMNITPTLVVLLQELERFNRLISRMGSTLSLLRKALAGEIGMDAVLDNVSYSLFNGQLPQVWRALAPATCKGLGGWMDHFIARTKQYTDWATVEEPVVIWLSGLHIPESYLIAHVQIACRLYTWPLDRSTQFTKVTSWVSADEIEERPVTVSCYILNILF

Uniprot

H9IX76   A0A2W1BCX8   A0A2A4JV42   A0A3S2LZK1   A0A212EHR2   A0A194QEV0   + More
A0A194RB51   A0A2H1WM61   A0A1B6KI68   A0A1B6L457   A0A1B6FAD1   A0A182UQT4   A0A2P8Z940   A0A0B7AAD9   D6WU89   W8BQ61   A0A182RZ92   A0A182NRZ8   A0A182PGJ2   A0A182JSY3   A0A084WBS3   A0A182IR22   A0A182WSM3   A0A0L7LG97   A0A1J1J5S5   A0A182VZG6   E0VQP2   A0A182TQL6   A0A1I8NF00   A0A336KTI1   Q7PUK6   A0A067RHZ6   A0A2C9JWZ8   A0A2C9JWZ0   Q8IHA1   A0A1I8PAD1   A0A195FRS5   V4BRT3   A0A195E3E9   C3XV31   A0A151WV17   A0A1S3INJ4   A0A2T7PHE3   E2AN69   A0A1A9X2L4   A0A310SST6   K1R5R4   A0A3L8DJJ8   A0A026WMF7   A0A1S3HMR6   A0A2R2MKY4   B4N8N4   K7J323   A0A0N0U4V3   A0A158NL89   A0A3B0JD27   A0A1X7UR28   A0A2J7QWW8   E9IZ04   A0A0M4EPR1   B3LV78   Q6NN83   B4K6Z4   B4G3H4   Q299Y5   I5ANL7   A0A0B4KI48   A0A1W4W2L4   B4MC48   A0A1W4WEG6   Q9VAV5   E1JJ04   A0A0J7L4X0   B4JGP4   A0A0N8JY00   B4PQS1   A0A195CSD5   A0A2G8KKM7   A0A1W4ZUV9   R7UWA6   A0A151I1T7   A0A2A3ERY9   W5K6M6   A0A3B4E236   A0A1S3PFH5   A0A1S3PEP0   W5MFQ0   A0A060W723   A0A1D2MX88   A0A444V3X1   B4IH10   M1EMK7   W4ZLH9   A0A154PNN1   A7SK91   A0A088ANX7   A0A3N0XJC6   A0A0L8GLR3   A0A267GW52   A0A210Q0K8  

Pubmed

19121390    28756777    22118469    26354079    29403074    18362917    + More
19820115    24495485    24438588    26227816    20566863    25315136    12364791    14747013    17210077    24845553    15562597    23254933    18563158    20798317    22992520    30249741    24508170    26383154    17994087    20075255    21347285    21282665    15632085    23185243    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    29023486    25329095    24755649    27289101    23236062    17615350    28812685   

EMBL

BABH01018149    BABH01018150    BABH01018151    BABH01018152    BABH01018153    BABH01018154    + More
BABH01018155    BABH01018156    BABH01018157    BABH01018158    KZ150261    PZC71735.1    NWSH01000608    PCG75353.1    RSAL01000096    RVE47735.1    AGBW02014810    OWR41026.1    KQ459053    KPJ04007.1    KQ460436    KPJ14719.1    ODYU01009554    SOQ54066.1    GEBQ01028838    JAT11139.1    GEBQ01021454    JAT18523.1    GECZ01022579    JAS47190.1    PYGN01000142    PSN53009.1    HACG01030060    CEK76925.1    KQ971352    EFA06783.2    GAMC01003160    JAC03396.1    ATLV01022432    ATLV01022433    KE525332    KFB47667.1    JTDY01001249    KOB74409.1    CVRI01000070    CRL07346.1    DS235430    EEB15698.1    UFQS01000469    UFQT01000469    SSX04260.1    SSX24625.1    AAAB01008987    EAA01367.6    KK852461    KDR23427.1    BT001345    AAN71100.1    KQ981281    KYN43305.1    KB202237    ESO91629.1    KQ979701    KYN19673.1    GG666468    EEN67957.1    KQ982718    KYQ51703.1    PZQS01000004    PVD32839.1    GL441102    EFN65120.1    KQ759770    OAD62940.1    JH817887    EKC41048.1    QOIP01000007    RLU20605.1    KK107152    EZA57210.1    CH964232    EDW81485.2    KQ435796    KOX73524.1    ADTU01018995    ADTU01018996    OUUW01000005    SPP80284.1    NEVH01009413    PNF33088.1    GL767078    EFZ14199.1    CP012526    ALC46147.1    CH902617    EDV43610.2    BT011410    AAR96202.1    CH933806    EDW15281.2    CH479179    EDW24982.1    CM000070    EAL27566.4    EIM52553.2    EIM52552.2    AE014297    AGB96416.1    CH940656    EDW58669.2    AAF56793.3    ACZ95053.1    LBMM01000749    KMQ97578.1    CH916369    EDV92648.1    JARO02006505    KPP65153.1    CM000160    EDW98410.2    KQ977306    KYN03638.1    MRZV01000518    PIK48527.1    AMQN01006005    KB297391    ELU10552.1    KQ976551    KYM80860.1    KZ288193    PBC34042.1    AHAT01005142    AHAT01005143    FR904417    CDQ62791.1    LJIJ01000456    ODM97295.1    SCEB01002648    RXM95124.1    CH480837    EDW49128.1    JP008739    AER97336.1    AAGJ04108843    AAGJ04108844    KQ435007    KZC13452.1    DS469685    EDO35852.1    RJVU01073043    ROI27764.1    KQ421273    KOF77888.1    NIVC01000119    PAA90251.1    NEDP02005302    OWF42267.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000053240    + More
UP000075903    UP000245037    UP000007266    UP000075900    UP000075884    UP000075885    UP000075881    UP000030765    UP000075880    UP000076407    UP000037510    UP000183832    UP000075920    UP000009046    UP000075902    UP000095301    UP000007062    UP000027135    UP000076420    UP000095300    UP000078541    UP000030746    UP000078492    UP000001554    UP000075809    UP000085678    UP000245119    UP000000311    UP000091820    UP000005408    UP000279307    UP000053097    UP000007798    UP000002358    UP000053105    UP000005205    UP000268350    UP000007879    UP000235965    UP000092553    UP000007801    UP000009192    UP000008744    UP000001819    UP000000803    UP000192221    UP000008792    UP000036403    UP000001070    UP000034805    UP000002282    UP000078542    UP000230750    UP000192224    UP000014760    UP000078540    UP000242457    UP000018467    UP000261440    UP000087266    UP000018468    UP000193380    UP000094527    UP000001292    UP000007110    UP000076502    UP000001593    UP000005203    UP000053454    UP000215902    UP000242188   

PRIDE

H9IX76    Q8IHA1    K1R5R4    Q6NN83    Q9VAV5    E1JJ04    + More

Pfam

PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF08385   DHC_N1
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF00781   DAGK_cat
PF00241   Cofilin_ADF
PF07728   AAA_5
PF01496   V_ATPase_I

Interpro

IPR042222   Dynein_2_N        + More
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR013594   Dynein_heavy_dom-1       
IPR042219   AAA_lid_11_sf       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR035699   AAA_6       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR026983   DHC_fam       
IPR002108   ADF-H       
IPR017904   ADF/Cofilin       
IPR017438   ATP-NAD_kinase_N       
IPR016064   NAD/diacylglycerol_kinase_sf       
IPR001206   Diacylglycerol_kinase_cat_dom       
IPR029006   ADF-H/Gelsolin-like_dom_sf       
IPR018130   Ribosomal_S2_CS       
IPR011704   ATPase_dyneun-rel_AAA       
IPR002490   V-ATPase_116kDa_su       

SUPFAM

SSF52540   SSF52540        + More
SSF111331   SSF111331       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20     3.40.20.10     3.40.50.10330    

CDD

cd11286  ADF_cofilin_like

ProteinModelPortal

H9IX76   A0A2W1BCX8   A0A2A4JV42   A0A3S2LZK1   A0A212EHR2   A0A194QEV0   + More
A0A194RB51   A0A2H1WM61   A0A1B6KI68   A0A1B6L457   A0A1B6FAD1   A0A182UQT4   A0A2P8Z940   A0A0B7AAD9   D6WU89   W8BQ61   A0A182RZ92   A0A182NRZ8   A0A182PGJ2   A0A182JSY3   A0A084WBS3   A0A182IR22   A0A182WSM3   A0A0L7LG97   A0A1J1J5S5   A0A182VZG6   E0VQP2   A0A182TQL6   A0A1I8NF00   A0A336KTI1   Q7PUK6   A0A067RHZ6   A0A2C9JWZ8   A0A2C9JWZ0   Q8IHA1   A0A1I8PAD1   A0A195FRS5   V4BRT3   A0A195E3E9   C3XV31   A0A151WV17   A0A1S3INJ4   A0A2T7PHE3   E2AN69   A0A1A9X2L4   A0A310SST6   K1R5R4   A0A3L8DJJ8   A0A026WMF7   A0A1S3HMR6   A0A2R2MKY4   B4N8N4   K7J323   A0A0N0U4V3   A0A158NL89   A0A3B0JD27   A0A1X7UR28   A0A2J7QWW8   E9IZ04   A0A0M4EPR1   B3LV78   Q6NN83   B4K6Z4   B4G3H4   Q299Y5   I5ANL7   A0A0B4KI48   A0A1W4W2L4   B4MC48   A0A1W4WEG6   Q9VAV5   E1JJ04   A0A0J7L4X0   B4JGP4   A0A0N8JY00   B4PQS1   A0A195CSD5   A0A2G8KKM7   A0A1W4ZUV9   R7UWA6   A0A151I1T7   A0A2A3ERY9   W5K6M6   A0A3B4E236   A0A1S3PFH5   A0A1S3PEP0   W5MFQ0   A0A060W723   A0A1D2MX88   A0A444V3X1   B4IH10   M1EMK7   W4ZLH9   A0A154PNN1   A7SK91   A0A088ANX7   A0A3N0XJC6   A0A0L8GLR3   A0A267GW52   A0A210Q0K8  

PDB

3VKH     E-value=2.91057e-10,     Score=155

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0051959   GO:0005930   GO:0045503   GO:0008569   GO:0045505   GO:0003341   GO:0005875   GO:0036156   GO:0042623   GO:0003779   GO:0015629   GO:0003951   GO:0030042   GO:0005840   GO:0016887   GO:0006412   GO:0003735   GO:0016021   GO:0016791   GO:0016620   GO:0046034   GO:0032559   GO:0004812   GO:0006418   GO:0003824  

PANTHER

PTHR10676  

Length:

275

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01356

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00608

outside

1  -  275

 

 

Pi

274.97034

Theta

155.023492

Tajima's D

1.93293

CLR

0.003973

CSRT

0.874306284685766

Interpretation

Uncertain