Gene

KWMTBOMO11375  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4438007-4442100      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.966

CDS

ATGAAGCTAAGTTCAGATTTCCCGGATCCCTTTGCGACACTTCCTGACGATATTACCAAATTCTTAGAAGAATGGCAAGAGTGGTTCGACAGTGATACACCAGAATCAGCGGAGATCCCGAACAACTATCGAGAAAAACTAAAGCCGTTCGAACTATTGATGCTATTGAGATGTTTCCGTGTTGATAGAATTTACAGAGCCCTTACCGACTACATAACCGTCACTATGGGAGAAGAGTACATTACGCCACCGGTTATAAGCCTCGACATGATTGTGGAGCAGACAACACCTTTTACACCAGTAGTCTTCATACTCAGTCCCGGGTCAGATCCTACCGCTGACCTTATGAAGCTAGCAGACAGATGTGGCTTCGGAGGAGGGAAATTTAAGTATCTGTCTCTCGGACAAGGCCAAGAGGGAGCCGCGCTGTCGTTACTGGAAGGTGCAATCTCACACGGGCAATGGTTGATCCTGCAAAATTGTCACCTGCTCGTGTCTTTCCTTCGGGAGCTGGAAAAGCAGCTAGAGCTTATGACGAAGCCCCATCCTGAGTACCGGCTGTGGCTAACCACAGATCCCACTCCGACGTTTCCTATTGGGATACTGCAGAGATCGCTTAAAGGTACGAACTTTTCAGACTTCGATAGATAA

Protein

MKLSSDFPDPFATLPDDITKFLEEWQEWFDSDTPESAEIPNNYREKLKPFELLMLLRCFRVDRIYRALTDYITVTMGEEYITPPVISLDMIVEQTTPFTPVVFILSPGSDPTADLMKLADRCGFGGGKFKYLSLGQGQEGAALSLLEGAISHGQWLILQNCHLLVSFLRELEKQLELMTKPHPEYRLWLTTDPTPTFPIGILQRSLKGTNFSDFDR

Uniprot

H9IX76   A0A3S2LZK1   A0A2A4JV42   A0A194QEV0   A0A212EHR2   A0A194RB51   + More
N6TR49   U4U1Q7   A0A310SST6   A0A2G8KKM7   D6WU89   E0VQP2   A0A088ANX7   A0A401RT93   A0A2A3ERY9   A0A1B6E9V8   A0A2C9JWZ0   A0A2C9JWZ8   V4BRT3   A0A3Q1B010   A0A2U9BMN3   G1TWV1   A0A2U9BLB0   W4ZJ22   A0A3P8UAE7   A0A146PNJ5   A0A3Q3MNV8   E9IZ04   A0A3S0ZI64   A0A1W4ZUV9   A0A0N8JY00   E2BZ36   A0A3B4YPF3   A0A2U9BSF8   A0A287AF97   F1RFM8   A0A158NL89   A0A3B4UD57   K7J323   A0A1B6L457   A0A151I1T7   W4ZEE6   A0A146RDU4   H0VPU7   L5KS76   A0A3S1HDS1   A0A2U4CJE2   M7BIQ2   A0A3P9A2D6   A0A3L8DJJ8   A0A3Q2WFN5   A0A026WMF7   A0A146Q7Z9   A0A3M6UJ04   A0A444V3X1   A0A3Q4MJC5   A0A3B4GFI9   A0A3P9CLL7   A0A2T7PHE3   A0A3P8RA28   A0A3Q1M7C5   W5NVZ5   F1MSP8   A0A2B4SPW3   A0A3Q1LNB4   A0A1B6FAD1   A0A452F048   C3XV30   A0A452F097   I3K6T1   A0A060W723   A0A1S3PEP0   A0A2Y9Q3E9   A0A1S3PFH5   A0A2J8XJ10   R7UWA6   G3P1E8   A0A3Q2PNV9   H3DEJ9   K1R5R4   F6Y358   A0A2G9SBI3   A0A2Y9FL08   A0A3Q2HVE5   F6XX18   A0A195E3E9   A0A384AQQ9   A0A151WV17   L9KWE0   Q4RSZ5   W4ZLH9   J9JHE6   E2RMJ8   F1PMG2   A0A2J8XJ00   A0A0J7L4X0   A0A3Q1G9E8   A0A154PNN1   A0A1U8CX33   A0A1S3W223  

Pubmed

19121390    26354079    22118469    23537049    29023486    18362917    + More
19820115    20566863    30297745    15562597    23254933    21993624    21282665    20798317    21347285    20075255    23258410    23624526    25069045    30249741    24508170    30382153    25186727    19393038    20809919    18563158    24755649    15496914    22992520    19892987    23385571    16341006   

EMBL

BABH01018149    BABH01018150    BABH01018151    BABH01018152    BABH01018153    BABH01018154    + More
BABH01018155    BABH01018156    BABH01018157    BABH01018158    RSAL01000096    RVE47735.1    NWSH01000608    PCG75353.1    KQ459053    KPJ04007.1    AGBW02014810    OWR41026.1    KQ460436    KPJ14719.1    APGK01057806    KB741282    ENN70796.1    KB631802    ERL86248.1    KQ759770    OAD62940.1    MRZV01000518    PIK48527.1    KQ971352    EFA06783.2    DS235430    EEB15698.1    BEZZ01002175    GCC21331.1    KZ288193    PBC34042.1    GEDC01002595    JAS34703.1    KB202237    ESO91629.1    CP026249    AWP04866.1    AWP04865.1    AAGJ04023690    AAGJ04023691    GCES01140871    JAQ45451.1    GL767078    EFZ14199.1    RQTK01000744    RUS75420.1    JARO02006505    KPP65153.1    GL451555    EFN79038.1    CP026251    AWP07104.1    AEMK02000096    ADTU01018995    ADTU01018996    GEBQ01021454    JAT18523.1    KQ976551    KYM80860.1    AAGJ04084865    AAGJ04084866    AAGJ04084867    AAGJ04084868    GCES01119810    JAQ66512.1    AAKN02052321    AAKN02052322    KB030576    ELK14267.1    RQTK01000590    RUS77325.1    KB523138    EMP37074.1    QOIP01000007    RLU20605.1    KK107152    EZA57210.1    GCES01134355    JAQ51967.1    RCHS01001413    RMX53673.1    SCEB01002648    RXM95124.1    PZQS01000004    PVD32839.1    AMGL01039153    AMGL01039154    AMGL01039155    AMGL01039156    AMGL01039157    AMGL01039158    AMGL01039159    LSMT01000040    PFX31123.1    GECZ01022579    JAS47190.1    LWLT01000018    GG666468    EEN67956.1    AERX01026833    AERX01026834    FR904417    CDQ62791.1    NDHI03003364    PNJ82016.1    AMQN01006005    KB297391    ELU10552.1    JH817887    EKC41048.1    KV926115    PIO37502.1    KQ979701    KYN19673.1    KQ982718    KYQ51703.1    KB320685    ELW65477.1    CAAE01014999    CAG08487.1    AAGJ04108843    AAGJ04108844    AAEX03014636    AAEX03014637    PNJ82015.1    LBMM01000749    KMQ97578.1    KQ435007    KZC13452.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000053240    + More
UP000019118    UP000030742    UP000230750    UP000007266    UP000009046    UP000005203    UP000287033    UP000242457    UP000076420    UP000030746    UP000257160    UP000246464    UP000001811    UP000007110    UP000265080    UP000261640    UP000271974    UP000192224    UP000034805    UP000008237    UP000261360    UP000008227    UP000005205    UP000261420    UP000002358    UP000078540    UP000005447    UP000010552    UP000245320    UP000031443    UP000265140    UP000279307    UP000264840    UP000053097    UP000275408    UP000261580    UP000261460    UP000265160    UP000245119    UP000265100    UP000009136    UP000002356    UP000225706    UP000291000    UP000001554    UP000005207    UP000193380    UP000087266    UP000248483    UP000014760    UP000007635    UP000265000    UP000007303    UP000005408    UP000002281    UP000078492    UP000261681    UP000075809    UP000011518    UP000002254    UP000036403    UP000257200    UP000076502    UP000189705    UP000079721   

PRIDE

H9IX76    F1RFM8    K1R5R4   

Pfam

PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF08385   DHC_N1
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF07728   AAA_5
PF01496   V_ATPase_I
PF07773   DUF1619
PF03850   Tfb4
PF00781   DAGK_cat
PF00241   Cofilin_ADF

Interpro

IPR042222   Dynein_2_N        + More
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR013594   Dynein_heavy_dom-1       
IPR042219   AAA_lid_11_sf       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR035699   AAA_6       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR026983   DHC_fam       
IPR018130   Ribosomal_S2_CS       
IPR011704   ATPase_dyneun-rel_AAA       
IPR036465   vWFA_dom_sf       
IPR011677   DUF1619       
IPR004600   TFIIH_Tfb4/GTF2H3       
IPR002490   V-ATPase_116kDa_su       
IPR002108   ADF-H       
IPR017904   ADF/Cofilin       
IPR017438   ATP-NAD_kinase_N       
IPR016064   NAD/diacylglycerol_kinase_sf       
IPR001206   Diacylglycerol_kinase_cat_dom       
IPR029006   ADF-H/Gelsolin-like_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF111331   SSF111331       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20     3.40.50.410     3.40.20.10     3.40.50.10330    

CDD

cd11286  ADF_cofilin_like

ProteinModelPortal

H9IX76   A0A3S2LZK1   A0A2A4JV42   A0A194QEV0   A0A212EHR2   A0A194RB51   + More
N6TR49   U4U1Q7   A0A310SST6   A0A2G8KKM7   D6WU89   E0VQP2   A0A088ANX7   A0A401RT93   A0A2A3ERY9   A0A1B6E9V8   A0A2C9JWZ0   A0A2C9JWZ8   V4BRT3   A0A3Q1B010   A0A2U9BMN3   G1TWV1   A0A2U9BLB0   W4ZJ22   A0A3P8UAE7   A0A146PNJ5   A0A3Q3MNV8   E9IZ04   A0A3S0ZI64   A0A1W4ZUV9   A0A0N8JY00   E2BZ36   A0A3B4YPF3   A0A2U9BSF8   A0A287AF97   F1RFM8   A0A158NL89   A0A3B4UD57   K7J323   A0A1B6L457   A0A151I1T7   W4ZEE6   A0A146RDU4   H0VPU7   L5KS76   A0A3S1HDS1   A0A2U4CJE2   M7BIQ2   A0A3P9A2D6   A0A3L8DJJ8   A0A3Q2WFN5   A0A026WMF7   A0A146Q7Z9   A0A3M6UJ04   A0A444V3X1   A0A3Q4MJC5   A0A3B4GFI9   A0A3P9CLL7   A0A2T7PHE3   A0A3P8RA28   A0A3Q1M7C5   W5NVZ5   F1MSP8   A0A2B4SPW3   A0A3Q1LNB4   A0A1B6FAD1   A0A452F048   C3XV30   A0A452F097   I3K6T1   A0A060W723   A0A1S3PEP0   A0A2Y9Q3E9   A0A1S3PFH5   A0A2J8XJ10   R7UWA6   G3P1E8   A0A3Q2PNV9   H3DEJ9   K1R5R4   F6Y358   A0A2G9SBI3   A0A2Y9FL08   A0A3Q2HVE5   F6XX18   A0A195E3E9   A0A384AQQ9   A0A151WV17   L9KWE0   Q4RSZ5   W4ZLH9   J9JHE6   E2RMJ8   F1PMG2   A0A2J8XJ00   A0A0J7L4X0   A0A3Q1G9E8   A0A154PNN1   A0A1U8CX33   A0A1S3W223  

PDB

4RH7     E-value=4.39987e-20,     Score=238

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0051293   GO:0008090   GO:0005868   GO:0045503   GO:0005938   GO:0007097   GO:0051959   GO:1904115   GO:0008569   GO:0045505   GO:0000278   GO:0031122   GO:0072382   GO:0005881   GO:0016021   GO:0005840   GO:0016887   GO:0006412   GO:0003735   GO:0005930   GO:0015991   GO:0033179   GO:0015078   GO:0006355   GO:0006289   GO:0000439   GO:0003779   GO:0015629   GO:0003951   GO:0030042   GO:0016791   GO:0016620   GO:0046034   GO:0032559   GO:0004812   GO:0006418   GO:0003824  

PANTHER

PTHR10676  

Length:

216

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01121

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01721

outside

1  -  216

 

 

Pi

152.830229

Theta

134.209511

Tajima's D

0.381813

CLR

0.118322

CSRT

0.480725963701815

Interpretation

Uncertain