Gene

KWMTBOMO11374  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4432577-4434371      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.526 PlasmaMembrane   Reliability : 1.11

CDS

ATGCTTGTACCTAGTAATCACTCGTGTCTGATAGAATCTGTTTTCTGTGGATTCGAACAGGTGATGGAAAAACTGGAACTGGCCGAAGCAACCACAAAAGATATAGAAAAACTAAGGGACGGCTACCGTCCGGTGGCGAAGCGCGGCTCCATACTGTTCTTCGTTCTATCCGACATGGCGGGCGTGAACAGCATGTACCAATACTCGCTGTCTTCATATCTAGACGTTTTCTCGTTTTCGTTGCGGAAAGCGATGCCGAACGTGATTTTAGTGAAGAGACTTAAGAACATAATTGATATGCTCACTAAAAACGTCTACGACTACGGCTGTACAGGTATATTCTTGCAACGGGCTATTACACATAAACTGTAG

Protein

MLVPSNHSCLIESVFCGFEQVMEKLELAEATTKDIEKLRDGYRPVAKRGSILFFVLSDMAGVNSMYQYSLSSYLDVFSFSLRKAMPNVILVKRLKNIIDMLTKNVYDYGCTGIFLQRAITHKL

Uniprot

A0A3S2LP16   H9IX76   A0A2W1BD47   A0A194QEV0   A0A194RB51   A0A3S2LZK1   + More
A0A212EHR2   A0A2H1VR18   U4U1Q7   N6TR49   A0A183XAH2   A0A3P8KBE1   W5MFQ0   D6WU89   A0A0B7A7I1   K7FM63   A0A452I0T0   A0A452I0W3   A0A1S3PFH5   A0A1S3PEP0   A0A310SST6   A0A151NS45   A0A3Q0RTW8   C3XV30   A0A1U8CX33   M7BIQ2   A0A034V0L7   A0A183Q1F5   A0A154PNN1   A0A2A3ERY9   A0A1S3INJ4   A0A060W723   A0A3P9A2D6   A0A401Q7P6   A0A2H1CC55   A0A088ANX7   A0A0L0CEV9   A0A402F8C2   A0A1A9XJK5   A0A1S3HMR6   A0A2R2MKY4   F7DW33   A0A2G8KKM7   W5K6M6   A0A3S1HDS1   A0A1B0C738   A0A1L8I0W3   H9GM01   A0A3P8RA28   A0A3B3XVX4   A0A1A9X2L4   A0A2G9SBI3   A0A2D0PL14   A0A2D0PNR9   A0A1D2MX88   A0A3Q4MJC5   A0A3B5MHF8   A0A1I8NF00   H0WZ43   A0A3P9CLL7   A0A3B4GFI9   A0A3Q2WFN5   A0A3B5QTB2   A0A0L8GLR3   A0A2T7PHE2   A0A0L8GLN5   A0A3B3QK43   A0A0J7L4X0   A0A1S3W223   A0A0N0U4V3   A0A315UWI8   A0A087XTH1   A0A1W4ZUV9   A0A0N8JY00   A0A1S3FRL5   E2BZ36   A0A3B4YPF3   A0A3B3TNK4   A0A3B4E236   A0A1B0G3I6   R7UWA6   F7CP57   A0A210Q0K8   A0A430Q0A1   A0A1A9ZFQ2   A0A151I1T7   A0A1A9UNN9   A0A3N0XJC6   A0A182IR22   L5KS76   A0A2C9JWZ8   A0A2C9JWZ0   H3BAL0   A0A095AHA3   A0A3B4UD57   A0A2T7PHE3   T1JML4   A0A3Q3E3F5   A0A0M4EPR1   W4ZEE6  

Pubmed

19121390    28756777    26354079    22118469    23537049    18362917    + More
19820115    17381049    28562605    22293439    18563158    23624526    25348373    24755649    25069045    30297745    26108605    26383154    20431018    29023486    25329095    27762356    21881562    27289101    25186727    25315136    23542700    29240929    29703783    20798317    23254933    18464734    28812685    23258410    15562597    9215903    22246508   

EMBL

RSAL01001995    RVE40608.1    BABH01018149    BABH01018150    BABH01018151    BABH01018152    + More
BABH01018153    BABH01018154    BABH01018155    BABH01018156    BABH01018157    BABH01018158    KZ150261    PZC71734.1    KQ459053    KPJ04007.1    KQ460436    KPJ14719.1    RSAL01000096    RVE47735.1    AGBW02014810    OWR41026.1    ODYU01003927    SOQ43291.1    KB631802    ERL86248.1    APGK01057806    KB741282    ENN70796.1    UZAO01134930    VDQ17255.1    AHAT01005142    AHAT01005143    KQ971352    EFA06783.2    HACG01030059    CEK76924.1    AGCU01061902    AGCU01061903    AGCU01061904    AGCU01061905    AGCU01061906    AGCU01061907    AGCU01061908    AGCU01061909    AGCU01061910    AGCU01061911    KQ759770    OAD62940.1    AKHW03002185    KYO39614.1    GG666468    EEN67956.1    KB523138    EMP37074.1    GAKP01023284    JAC35672.1    UZAL01044444    VDP82477.1    KQ435007    KZC13452.1    KZ288193    PBC34042.1    FR904417    CDQ62791.1    BFAA01020178    GCB81414.1    KZ429962    PIS85059.1    JRES01000501    KNC30752.1    BDOT01000138    GCF52688.1    AAMC01042923    AAMC01042924    MRZV01000518    PIK48527.1    RQTK01000590    RUS77325.1    JXJN01027505    JXJN01027506    JXJN01027507    CM004466    OCU02010.1    KV926115    PIO37502.1    LJIJ01000456    ODM97295.1    AAQR03124676    AAQR03124677    AAQR03124678    KQ421273    KOF77888.1    PZQS01000004    PVD32838.1    KOF77887.1    LBMM01000749    KMQ97578.1    KQ435796    KOX73524.1    NHOQ01002573    PWA15723.1    AYCK01007726    JARO02006505    KPP65153.1    GL451555    EFN79038.1    CCAG010016326    CCAG010016327    AMQN01006005    KB297391    ELU10552.1    NEDP02005302    OWF42267.1    QMKO01003563    RTG81154.1    KQ976551    KYM80860.1    RJVU01073043    ROI27764.1    KB030576    ELK14267.1    AFYH01016331    AFYH01016332    AFYH01016333    AFYH01016334    AFYH01016335    AFYH01016336    AFYH01016337    AFYH01016338    AFYH01016339    AFYH01016340    KL250542    KGB33311.1    PVD32839.1    JH431878    CP012526    ALC46147.1    AAGJ04084865    AAGJ04084866    AAGJ04084867    AAGJ04084868   

Proteomes

UP000283053    UP000005204    UP000053268    UP000053240    UP000007151    UP000030742    + More
UP000019118    UP000050795    UP000018468    UP000007266    UP000007267    UP000291020    UP000087266    UP000050525    UP000261340    UP000001554    UP000189705    UP000031443    UP000050791    UP000076502    UP000242457    UP000085678    UP000193380    UP000265140    UP000288216    UP000005203    UP000037069    UP000288954    UP000092443    UP000008143    UP000230750    UP000018467    UP000271974    UP000092460    UP000186698    UP000001646    UP000265100    UP000261480    UP000091820    UP000221080    UP000094527    UP000261580    UP000261380    UP000095301    UP000005225    UP000265160    UP000261460    UP000264840    UP000002852    UP000053454    UP000245119    UP000261540    UP000036403    UP000079721    UP000053105    UP000028760    UP000192224    UP000034805    UP000081671    UP000008237    UP000261360    UP000261500    UP000261440    UP000092444    UP000014760    UP000002279    UP000242188    UP000092445    UP000078540    UP000078200    UP000075880    UP000010552    UP000076420    UP000008672    UP000261420    UP000261660    UP000092553    UP000007110   

PRIDE

H9IX76   

Pfam

PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF08385   DHC_N1
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF01496   V_ATPase_I
PF07773   DUF1619
PF03850   Tfb4
PF07728   AAA_5
PF00615   RGS

Interpro

IPR042222   Dynein_2_N        + More
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR013594   Dynein_heavy_dom-1       
IPR042219   AAA_lid_11_sf       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR035699   AAA_6       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR026983   DHC_fam       
IPR036465   vWFA_dom_sf       
IPR011677   DUF1619       
IPR004600   TFIIH_Tfb4/GTF2H3       
IPR002490   V-ATPase_116kDa_su       
IPR011704   ATPase_dyneun-rel_AAA       
IPR036305   RGS_sf       
IPR016137   RGS       
IPR037719   AKAP10_AKB_dom       

SUPFAM

SSF52540   SSF52540        + More
SSF48097   SSF48097       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20     3.40.50.410    

CDD

cd12804  AKAP10_AKB

ProteinModelPortal

A0A3S2LP16   H9IX76   A0A2W1BD47   A0A194QEV0   A0A194RB51   A0A3S2LZK1   + More
A0A212EHR2   A0A2H1VR18   U4U1Q7   N6TR49   A0A183XAH2   A0A3P8KBE1   W5MFQ0   D6WU89   A0A0B7A7I1   K7FM63   A0A452I0T0   A0A452I0W3   A0A1S3PFH5   A0A1S3PEP0   A0A310SST6   A0A151NS45   A0A3Q0RTW8   C3XV30   A0A1U8CX33   M7BIQ2   A0A034V0L7   A0A183Q1F5   A0A154PNN1   A0A2A3ERY9   A0A1S3INJ4   A0A060W723   A0A3P9A2D6   A0A401Q7P6   A0A2H1CC55   A0A088ANX7   A0A0L0CEV9   A0A402F8C2   A0A1A9XJK5   A0A1S3HMR6   A0A2R2MKY4   F7DW33   A0A2G8KKM7   W5K6M6   A0A3S1HDS1   A0A1B0C738   A0A1L8I0W3   H9GM01   A0A3P8RA28   A0A3B3XVX4   A0A1A9X2L4   A0A2G9SBI3   A0A2D0PL14   A0A2D0PNR9   A0A1D2MX88   A0A3Q4MJC5   A0A3B5MHF8   A0A1I8NF00   H0WZ43   A0A3P9CLL7   A0A3B4GFI9   A0A3Q2WFN5   A0A3B5QTB2   A0A0L8GLR3   A0A2T7PHE2   A0A0L8GLN5   A0A3B3QK43   A0A0J7L4X0   A0A1S3W223   A0A0N0U4V3   A0A315UWI8   A0A087XTH1   A0A1W4ZUV9   A0A0N8JY00   A0A1S3FRL5   E2BZ36   A0A3B4YPF3   A0A3B3TNK4   A0A3B4E236   A0A1B0G3I6   R7UWA6   F7CP57   A0A210Q0K8   A0A430Q0A1   A0A1A9ZFQ2   A0A151I1T7   A0A1A9UNN9   A0A3N0XJC6   A0A182IR22   L5KS76   A0A2C9JWZ8   A0A2C9JWZ0   H3BAL0   A0A095AHA3   A0A3B4UD57   A0A2T7PHE3   T1JML4   A0A3Q3E3F5   A0A0M4EPR1   W4ZEE6  

PDB

4RH7     E-value=1.98077e-10,     Score=151

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0016021   GO:0005930   GO:0045505   GO:0008569   GO:0051959   GO:0045503   GO:0015991   GO:0033179   GO:0015078   GO:0006355   GO:0006289   GO:0000439   GO:0016887   GO:0051018  

PANTHER

PTHR10676  

Length:

123

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.18952

Exp number, first 60 AAs:

1.06377

Total prob of N-in:

0.15579

outside

1  -  123

 

 

Pi

213.362586

Theta

117.734547

Tajima's D

2.342867

CLR

0.000837

CSRT

0.927653617319134

Interpretation

Uncertain