Gene

KWMTBOMO11373  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4424707-4432061      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.477 Golgi   Reliability : 1.586

CDS

ATGATCGGTATGATACCGGCTCTGTTCGGTGATGATGAGAAGGACAGCATCATCAACTCTGTGAGAAACGACAGCAGCGATGCCGGATACGGGATAGCTAAGGATGCAGTTTGGAACTTCTTCTGCAACAGATGCGCGGACAATCTACACGTAGTGCTGTCGATGTCTCCGAGCGGAGACATTCTTAGAAACAGGTGTCGGAGTTTTCCTGGTCTAGTGAATAACACGACAATCGACTGGCAATTCCCTTGGCCGAAGCAGGCGTTGTTAGCTGTTGCTAACGTGTTTCTCGCTGATGTTCAGAAAATTCCAGAAGAATTTCGTCCCATAATAGTGGAGCATGTAGTCCACGTGCACATGTCGGTAGCACGATACTCTGCAGAGTTCCTGCTTCGACTTCGAAGAAACAACTACGTTACGCCCAAACATTACATGGATTTTCTAACCAATTATTTGGCTCTTCTAAATGAAAAAGACGCTTTCATAGTCGCTCAGTGTGAACGATTAAAAGGAGGGCTTGCTAAAATAGCCGAAGCAAATGTTCAGTTAGAAGACTTGAATGCGAAACTCGCAGTCCAGAAGGTTATCGTCGCCGAACAAACTAAGGAATGTGAAATATTGCTTAAAGAAATTTCTACAGCTACTGAAGCCGCAGTAGCAAAACAGCAAGTGGCGGGAGTGAAGTCGGTTGAGATCACCGAACAGAGCAAGGTCATCGCCGTGGAGAAGGCTGATGCTGAGGAGGCGTTGTCTGCTGCGTTGCCTGCACTAGAAGCTGCAAGATTGGCCCTTGCTGATTTGGACAAGAACGATATTACTGAAATTCGATCTTTTGCAACACCCCCTGAAGCTGTACAGGTGGTGTGTGAATGCGTCGTAATAATCAGAGGAATTAAAGATGTAAGTTGGAAAGGCGCCAAGGGAATGATGGCAGATCCAAATTTCTTGCGGAATCTTCAAGAGATGAACTGCGATCTTATCACTCAGGCACAAGTTAAGGCGGTAAAAACGCACATGAAAAAGAGTAAAAAACTGGATACGATGCAGCAGATTAGCAAAGCTGGATATGGACTACTAAAGTTTGTCACTGCAGTATTGGGCTATTGTGCCGTCTACAAAGAAGTCAAACCAAAAAAAGAGAAAGTAGAAGCACTAGAGAAAGAATATTCGGAAGCTGTCAACTATTTGGCTTCCCTCAATAGAGAAATCGACCGACTACAGAAGACTTTAGACGGACTAAACAATCGTTACGAAACGGCCATGATGAGAAGACAGGAACTTCAAGAAGAAACCGATCTGATGATGCGGAGATTGGTGGCAGCAGATAAACTAATGTCTGGACTGTCTAGTGAGCAGAAAAGGTGGACAGAAGATTTGGCAGCCTTATATGTAGAACAATCGAGGCTTATAGGAAACTGTTTGTTGGCAACGTCTTTCTTGAGCTACACCGGTCCTTTCTCGTTTTCATTTCGACAAACTATGATTTACGAGGATTGGTTGGGCGATGTTATGGAGAGGGGAATACCGTTGACTCTACCCTTTACAATTGAACGAAATTTGACTAATGAAGTTGAAGTCAGCGGGTGGAATAGTGAAGGTCTACCTCCAGATGAGTTGTCAGTCCAAAACGGAATACTAACAACAAGAGCCTCGAGGTTTCCATTGTGCATCGACCCTCAAACGCAAGCTCTCACATGGATAAAAAAGAAGGAGGCTAAAAATAATCTAAAGGTCCTATCGTTTAACGATCCACAATTCTTGAGGCAATTGGAGATGGCGATCAAGTACGGAATGCCGGTTCTGTTTCAAGACGTAAATGAGTATATCGATCCAGTTGTAGATAATGTTTTGGAAAAGAATATCAAAGTGGAAAGCGGTCGGACATTCGTGATGCTAGGTAGCACGGAAGTAGACTACGACCCTAACTTCCGCATGTACCTGACCACGAAGCTCGCCAACCCTCAATTCAACCCGGCTGCGTATGCGAAAGCCGTTGTTATTAACTACACAGTCACCGTTCAGGGTCTCGAAGATCAGCTTCTCAGCGTAGTAGTACGCGCAGAACGTTCAGATCTTGAGGAGCAGCGGGAAAGCCTCATCATCGAGACCAGCGCGAACAAGAGTTTACTTTCTGGACTGGAGGACTCTCTGCTCAGGGAGCTGGCCACGTCGACCGGTAACATGCTGGATAATGTTGAACTGGTCAATACTTTGGAAAACACCAAGTCTAAAGCTGCTGAGGTGAGGAAATACTGA

Protein

MIGMIPALFGDDEKDSIINSVRNDSSDAGYGIAKDAVWNFFCNRCADNLHVVLSMSPSGDILRNRCRSFPGLVNNTTIDWQFPWPKQALLAVANVFLADVQKIPEEFRPIIVEHVVHVHMSVARYSAEFLLRLRRNNYVTPKHYMDFLTNYLALLNEKDAFIVAQCERLKGGLAKIAEANVQLEDLNAKLAVQKVIVAEQTKECEILLKEISTATEAAVAKQQVAGVKSVEITEQSKVIAVEKADAEEALSAALPALEAARLALADLDKNDITEIRSFATPPEAVQVVCECVVIIRGIKDVSWKGAKGMMADPNFLRNLQEMNCDLITQAQVKAVKTHMKKSKKLDTMQQISKAGYGLLKFVTAVLGYCAVYKEVKPKKEKVEALEKEYSEAVNYLASLNREIDRLQKTLDGLNNRYETAMMRRQELQEETDLMMRRLVAADKLMSGLSSEQKRWTEDLAALYVEQSRLIGNCLLATSFLSYTGPFSFSFRQTMIYEDWLGDVMERGIPLTLPFTIERNLTNEVEVSGWNSEGLPPDELSVQNGILTTRASRFPLCIDPQTQALTWIKKKEAKNNLKVLSFNDPQFLRQLEMAIKYGMPVLFQDVNEYIDPVVDNVLEKNIKVESGRTFVMLGSTEVDYDPNFRMYLTTKLANPQFNPAAYAKAVVINYTVTVQGLEDQLLSVVVRAERSDLEEQRESLIIETSANKSLLSGLEDSLLRELATSTGNMLDNVELVNTLENTKSKAAEVRKY

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

A0A3S2LZK1   H9IX76   A0A2W1BD47   A0A2H1VR18   A0A194QEV0   A0A212EHR2   + More
A0A2A4JUQ2   D6WU89   A0A1B6E9V8   N6TR49   U4U1Q7   B0W463   E0VQP2   A0A182NRZ8   A0A182IR22   A0A182ML65   A0A182PGJ2   A0A084WBS3   A0A2K6VB31   A0A182WSM3   A0A182TQL6   W5JGD3   A0A182HLH3   A0A182RZ92   A0A182Y3M9   Q7PUK6   A0A182QCK4   A0A182VZG6   K7J323   A0A182JSY3   A0A2R2MKY4   A0A182FQC7   A0A2T7PHE3   A0A2A3ERY9   W5MFQ0   A0A310SST6   A0A088ANX7   W4ZLH9   A0A3S1HDS1   A0A2C9JWZ8   A0A2C9JWZ0   A0A1S3PFH5   A0A1S3PEP0   A0A0N0U4V3   A0A3B4UD57   A0A0J7L4X0   V4BRT3   A0A2D0PL14   A0A3P8RA28   A0A2D0PNR9   A0A3B4YPF3   A0A3B4E236   A0A2J7QWX6   A0A0L8GLR3   A0A182VNE8   A0A1I8GN74   A0A267GW52   A0A0L8GLN5   A0A3P9CLL7   A0A1I8HCA9   A0A3B4GFI9   A0A3Q2WFN5   A0A267GS85   A0A060W723   A0A3P9A2D6   A0A1I8H2U4   A0A3Q4MJC5   A0A1L8I0W3   A0A1I8PAD1   A0A3Q0K813   E2AN69   A0A3Q0K9X2   F7DW33   A0A3Q3MNV8   A0A1A9XJK5   A0A1W4ZUV9   W5K6M6   A0A151WV17   A0A210Q0K8   A0A154PNN1   A0A1B0C738   A0A3L8DJJ8   A0A3B3TNK4   E9IZ04   A0A1I8NF00   K1R5R4   A0A452I0W3   I3K6T1   A0A452I0T0   A0A195E3E9   A0A3Q1B010   A0A1B0G3I6   A0A087XTH1   A0A1S8WG81   C3XV30   A0A3B3QK43   A0A3N0XJC6   G1NVC6   A0A1A9ZFQ2  

Pubmed

19121390    28756777    26354079    22118469    18362917    19820115    + More
23537049    20566863    24438588    20920257    25244985    12364791    14747013    17210077    20075255    26383154    15562597    23254933    26392545    25186727    24755649    25069045    27762356    20798317    20431018    25329095    28812685    30249741    21282665    25315136    22992520    28562605    18563158    29240929    21993624   

EMBL

RSAL01000096    RVE47735.1    BABH01018149    BABH01018150    BABH01018151    BABH01018152    + More
BABH01018153    BABH01018154    BABH01018155    BABH01018156    BABH01018157    BABH01018158    KZ150261    PZC71734.1    ODYU01003927    SOQ43291.1    KQ459053    KPJ04007.1    AGBW02014810    OWR41026.1    NWSH01000608    PCG75354.1    KQ971352    EFA06783.2    GEDC01002595    JAS34703.1    APGK01057806    KB741282    ENN70796.1    KB631802    ERL86248.1    DS231835    EDS32907.1    DS235430    EEB15698.1    AXCM01008242    ATLV01022432    ATLV01022433    KE525332    KFB47667.1    ADMH02001601    ETN61879.1    APCN01000900    AAAB01008987    EAA01367.6    AXCN02000261    PZQS01000004    PVD32839.1    KZ288193    PBC34042.1    AHAT01005142    AHAT01005143    KQ759770    OAD62940.1    AAGJ04108843    AAGJ04108844    RQTK01000590    RUS77325.1    KQ435796    KOX73524.1    LBMM01000749    KMQ97578.1    KB202237    ESO91629.1    NEVH01009413    PNF33091.1    KQ421273    KOF77888.1    NIVC01000119    PAA90251.1    KOF77887.1    NIVC01000173    PAA88873.1    FR904417    CDQ62791.1    CM004466    OCU02010.1    GL441102    EFN65120.1    AAMC01042923    AAMC01042924    KQ982718    KYQ51703.1    NEDP02005302    OWF42267.1    KQ435007    KZC13452.1    JXJN01027505    JXJN01027506    JXJN01027507    QOIP01000007    RLU20605.1    GL767078    EFZ14199.1    JH817887    EKC41048.1    AERX01026833    AERX01026834    KQ979701    KYN19673.1    CCAG010016326    CCAG010016327    AYCK01007726    KV907382    OON13472.1    GG666468    EEN67956.1    RJVU01073043    ROI27764.1    AAPE02053552    AAPE02053553    AAPE02053554   

Proteomes

UP000283053    UP000005204    UP000053268    UP000007151    UP000218220    UP000007266    + More
UP000019118    UP000030742    UP000002320    UP000009046    UP000075884    UP000075880    UP000075883    UP000075885    UP000030765    UP000076407    UP000075902    UP000000673    UP000075840    UP000075900    UP000076408    UP000007062    UP000075886    UP000075920    UP000002358    UP000075881    UP000085678    UP000069272    UP000245119    UP000242457    UP000018468    UP000005203    UP000007110    UP000271974    UP000076420    UP000087266    UP000053105    UP000261420    UP000036403    UP000030746    UP000221080    UP000265100    UP000261360    UP000261440    UP000235965    UP000053454    UP000075903    UP000095280    UP000215902    UP000265160    UP000261460    UP000264840    UP000193380    UP000265140    UP000261580    UP000186698    UP000095300    UP000000311    UP000008143    UP000261640    UP000092443    UP000192224    UP000018467    UP000075809    UP000242188    UP000076502    UP000092460    UP000279307    UP000261500    UP000095301    UP000005408    UP000291020    UP000005207    UP000078492    UP000257160    UP000092444    UP000028760    UP000001554    UP000261540    UP000001074    UP000092445   

PRIDE

H9IX76    K1R5R4   

Pfam

PF17857   AAA_lid_1        + More
PF12777   MT
PF08385   DHC_N1
PF17852   Dynein_AAA_lid
PF18199   Dynein_C
PF12780   AAA_8
PF18198   AAA_lid_11
PF03028   Dynein_heavy
PF12781   AAA_9
PF08393   DHC_N2
PF12774   AAA_6
PF07728   AAA_5
PF00001   7tm_1
PF00781   DAGK_cat
PF00241   Cofilin_ADF

Interpro

IPR035699   AAA_6        + More
IPR042228   Dynein_2_C       
IPR041228   Dynein_C       
IPR041658   AAA_lid_11       
IPR003593   AAA+_ATPase       
IPR041466   Dynein_AAA5_ext       
IPR013594   Dynein_heavy_dom-1       
IPR004273   Dynein_heavy_D6_P-loop       
IPR013602   Dynein_heavy_dom-2       
IPR042219   AAA_lid_11_sf       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR027417   P-loop_NTPase       
IPR042222   Dynein_2_N       
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR026983   DHC_fam       
IPR011704   ATPase_dyneun-rel_AAA       
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       
IPR018130   Ribosomal_S2_CS       
IPR002108   ADF-H       
IPR017904   ADF/Cofilin       
IPR017438   ATP-NAD_kinase_N       
IPR016064   NAD/diacylglycerol_kinase_sf       
IPR001206   Diacylglycerol_kinase_cat_dom       
IPR029006   ADF-H/Gelsolin-like_dom_sf       
IPR027267   AH/BAR_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF111331   SSF111331       
SSF103657   SSF103657       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20     3.40.20.10     3.40.50.10330    

CDD

cd11286  ADF_cofilin_like

ProteinModelPortal

A0A3S2LZK1   H9IX76   A0A2W1BD47   A0A2H1VR18   A0A194QEV0   A0A212EHR2   + More
A0A2A4JUQ2   D6WU89   A0A1B6E9V8   N6TR49   U4U1Q7   B0W463   E0VQP2   A0A182NRZ8   A0A182IR22   A0A182ML65   A0A182PGJ2   A0A084WBS3   A0A2K6VB31   A0A182WSM3   A0A182TQL6   W5JGD3   A0A182HLH3   A0A182RZ92   A0A182Y3M9   Q7PUK6   A0A182QCK4   A0A182VZG6   K7J323   A0A182JSY3   A0A2R2MKY4   A0A182FQC7   A0A2T7PHE3   A0A2A3ERY9   W5MFQ0   A0A310SST6   A0A088ANX7   W4ZLH9   A0A3S1HDS1   A0A2C9JWZ8   A0A2C9JWZ0   A0A1S3PFH5   A0A1S3PEP0   A0A0N0U4V3   A0A3B4UD57   A0A0J7L4X0   V4BRT3   A0A2D0PL14   A0A3P8RA28   A0A2D0PNR9   A0A3B4YPF3   A0A3B4E236   A0A2J7QWX6   A0A0L8GLR3   A0A182VNE8   A0A1I8GN74   A0A267GW52   A0A0L8GLN5   A0A3P9CLL7   A0A1I8HCA9   A0A3B4GFI9   A0A3Q2WFN5   A0A267GS85   A0A060W723   A0A3P9A2D6   A0A1I8H2U4   A0A3Q4MJC5   A0A1L8I0W3   A0A1I8PAD1   A0A3Q0K813   E2AN69   A0A3Q0K9X2   F7DW33   A0A3Q3MNV8   A0A1A9XJK5   A0A1W4ZUV9   W5K6M6   A0A151WV17   A0A210Q0K8   A0A154PNN1   A0A1B0C738   A0A3L8DJJ8   A0A3B3TNK4   E9IZ04   A0A1I8NF00   K1R5R4   A0A452I0W3   I3K6T1   A0A452I0T0   A0A195E3E9   A0A3Q1B010   A0A1B0G3I6   A0A087XTH1   A0A1S8WG81   C3XV30   A0A3B3QK43   A0A3N0XJC6   G1NVC6   A0A1A9ZFQ2  

PDB

3VKH     E-value=9.05535e-85,     Score=802

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0016021   GO:0016887   GO:0051959   GO:0005930   GO:0045503   GO:0008569   GO:0045505   GO:0004930   GO:0005840   GO:0006412   GO:0003735   GO:0003779   GO:0015629   GO:0003951   GO:0030042  

PANTHER

PTHR10676  

Length:

751

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.46573

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00020

outside

1  -  751

 

 

Pi

174.166771

Theta

152.354652

Tajima's D

0.604931

CLR

1.260719

CSRT

0.542422878856057

Interpretation

Uncertain