Gene

KWMTBOMO11372  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4421287-4422161      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.992

CDS

ATGCTGTTTGGAGATTACAGGAATGCTCTTGATGAAGAAGAAATTCGATATTACGAAGATTTGTTGGATTACGAAGCGATTTATTTCCTGTTCCAGGAGATACTGGATGAGTACAATGAGCGTAACGCGAAGATGTCTATAGTACTGTTTGAAGATTGCCTAGAACACTTGACGAGGACTCATCGTATTTTGCGCATGGACCGTGGAAACGCCATGATTATCGGAGTCGGAGGATCTGGGAAGAAATCGATTTGCAAGCTGGCTGCGTTCGCTGCTGGTAAATAA

Protein

MLFGDYRNALDEEEIRYYEDLLDYEAIYFLFQEILDEYNERNAKMSIVLFEDCLEHLTRTHRILRMDRGNAMIIGVGGSGKKSICKLAAFAAGK

Uniprot

H9IX76   A0A3S2LZK1   A0A212EHR2   A0A2A4JUQ2   A0A2W1BD47   A0A2H1VR18   + More
A0A194RB51   A0A194QEV0   A0A2K6VB31   W5JGD3   A0A084WBS3   A0A182FQC7   A0A182ML65   A0A182IR22   A0A182SS90   A0A182QCK4   A0A182VZG6   A0A182RZ92   A0A182PGJ2   A0A182Y3M9   A0A182NRZ8   A0A182JSY3   A0A182WSM3   A0A182L9W2   A0A182HLH3   A0A182TQL6   Q7PUK6   B0W463   A0A336KTI1   A0A1I8PAD1   A0A1I8NF00   D6WU89   A0A1B6DAB9   A0A1B6E9V8   J9JHE6   M3WEE5   A0A384BX88   A0A452SER6   A0A452T7D0   M3XQT2   A0A3Q1M7C5   A0A3Q1LNB4   F1MSP8   A0A2U4CJE2   A0A2Y9FL08   A0A340WNS3   A0A3Q7WZU2   U4U1Q7   A0A0L0CEV9   K7J323   F1PMG2   A0A3Q0E024   F1RFM8   A0A3Q7U4P3   E2RMJ8   A0A2Y9HRD6   A0A2C9JP48   A0A341CKM5   A0A3Q2HVE5   N6TR49   A0A384AQQ9   F6XX18   A0A1A9XJK5   B4IH10   Q6NN83   F6Y358   A0A3Q7QTA6   A0A2Y9Q3E9   A0A1B6F9S8   Q9VAV5   E1JJ04   B4PQS1   A0A182ULR2   A0A0B4KI48   G1MA68   A0A3P4R7A1   G5AWU1   A0A2U3ZBB8   A0A2T7PHE3   S7NT47   A0A2T7PHE2   I3N0B0   A0A1S3FRL5   A0A1S3W223   A0A1A6GGP7   A0A2Y9E2P3   A0A287DCZ2   G3HX48   A0A1B0G3I6   G3SMY8   A0A1A9UNN9   G3SZS4   A0A060W723   A0A1A9ZFQ2   H0VPU7   W5NVZ5   A0A452F097   A0A267GS85   A0A2Y9KI96   B3LV78  

Pubmed

19121390    22118469    28756777    26354079    20920257    24438588    + More
25244985    20966253    12364791    14747013    17210077    25315136    18362917    19820115    16341006    17975172    24813606    19393038    23537049    26108605    20075255    15562597    19892987    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    20010809    21993625    21804562    24755649    21993624    20809919   

EMBL

BABH01018149    BABH01018150    BABH01018151    BABH01018152    BABH01018153    BABH01018154    + More
BABH01018155    BABH01018156    BABH01018157    BABH01018158    RSAL01000096    RVE47735.1    AGBW02014810    OWR41026.1    NWSH01000608    PCG75354.1    KZ150261    PZC71734.1    ODYU01003927    SOQ43291.1    KQ460436    KPJ14719.1    KQ459053    KPJ04007.1    ADMH02001601    ETN61879.1    ATLV01022432    ATLV01022433    KE525332    KFB47667.1    AXCM01008242    AXCN02000261    APCN01000900    AAAB01008987    EAA01367.6    DS231835    EDS32907.1    UFQS01000469    UFQT01000469    SSX04260.1    SSX24625.1    KQ971352    EFA06783.2    GEDC01014670    JAS22628.1    GEDC01002595    JAS34703.1    AAEX03014636    AAEX03014637    AANG04002472    AEYP01033312    AEYP01033313    AEYP01033314    AEYP01033315    AEYP01033316    AEYP01033317    KB631802    ERL86248.1    JRES01000501    KNC30752.1    AEMK02000096    APGK01057806    KB741282    ENN70796.1    CH480837    EDW49128.1    BT011410    AAR96202.1    GECZ01022793    JAS46976.1    AE014297    AAF56793.3    ACZ95053.1    CM000160    EDW98410.2    AGB96416.1    ACTA01040599    ACTA01048599    CYRY02039123    VCX30760.1    JH167272    EHB01487.1    PZQS01000004    PVD32839.1    KE164810    EPQ20301.1    PVD32838.1    AGTP01058426    AGTP01058427    AGTP01058428    AGTP01058429    AGTP01058430    AGTP01058431    AGTP01058432    AGTP01058433    LZPO01097191    OBS64457.1    JH000857    EGW04853.1    CCAG010016326    CCAG010016327    FR904417    CDQ62791.1    AAKN02052321    AAKN02052322    AMGL01039153    AMGL01039154    AMGL01039155    AMGL01039156    AMGL01039157    AMGL01039158    AMGL01039159    LWLT01000018    NIVC01000173    PAA88873.1    CH902617    EDV43610.2   

Proteomes

UP000005204    UP000283053    UP000007151    UP000218220    UP000053240    UP000053268    + More
UP000000673    UP000030765    UP000069272    UP000075883    UP000075880    UP000075901    UP000075886    UP000075920    UP000075900    UP000075885    UP000076408    UP000075884    UP000075881    UP000076407    UP000075882    UP000075840    UP000075902    UP000007062    UP000002320    UP000095300    UP000095301    UP000007266    UP000002254    UP000011712    UP000261680    UP000291022    UP000291021    UP000000715    UP000009136    UP000245320    UP000265300    UP000286642    UP000030742    UP000037069    UP000002358    UP000189704    UP000008227    UP000286640    UP000248481    UP000076420    UP000252040    UP000002281    UP000019118    UP000261681    UP000092443    UP000001292    UP000286641    UP000248483    UP000000803    UP000002282    UP000075903    UP000008912    UP000006813    UP000245340    UP000245119    UP000005215    UP000081671    UP000079721    UP000092124    UP000248480    UP000001075    UP000092444    UP000007646    UP000078200    UP000193380    UP000092445    UP000005447    UP000002356    UP000291000    UP000215902    UP000248482    UP000007801   

PRIDE

H9IX76    F1RFM8    Q6NN83    Q9VAV5    E1JJ04    G3HX48    + More

Pfam

PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF08385   DHC_N1
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF07728   AAA_5

Interpro

IPR042222   Dynein_2_N        + More
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR013594   Dynein_heavy_dom-1       
IPR042219   AAA_lid_11_sf       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR035699   AAA_6       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR026983   DHC_fam       
IPR011704   ATPase_dyneun-rel_AAA       
IPR027267   AH/BAR_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF103657   SSF103657       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20    

ProteinModelPortal

H9IX76   A0A3S2LZK1   A0A212EHR2   A0A2A4JUQ2   A0A2W1BD47   A0A2H1VR18   + More
A0A194RB51   A0A194QEV0   A0A2K6VB31   W5JGD3   A0A084WBS3   A0A182FQC7   A0A182ML65   A0A182IR22   A0A182SS90   A0A182QCK4   A0A182VZG6   A0A182RZ92   A0A182PGJ2   A0A182Y3M9   A0A182NRZ8   A0A182JSY3   A0A182WSM3   A0A182L9W2   A0A182HLH3   A0A182TQL6   Q7PUK6   B0W463   A0A336KTI1   A0A1I8PAD1   A0A1I8NF00   D6WU89   A0A1B6DAB9   A0A1B6E9V8   J9JHE6   M3WEE5   A0A384BX88   A0A452SER6   A0A452T7D0   M3XQT2   A0A3Q1M7C5   A0A3Q1LNB4   F1MSP8   A0A2U4CJE2   A0A2Y9FL08   A0A340WNS3   A0A3Q7WZU2   U4U1Q7   A0A0L0CEV9   K7J323   F1PMG2   A0A3Q0E024   F1RFM8   A0A3Q7U4P3   E2RMJ8   A0A2Y9HRD6   A0A2C9JP48   A0A341CKM5   A0A3Q2HVE5   N6TR49   A0A384AQQ9   F6XX18   A0A1A9XJK5   B4IH10   Q6NN83   F6Y358   A0A3Q7QTA6   A0A2Y9Q3E9   A0A1B6F9S8   Q9VAV5   E1JJ04   B4PQS1   A0A182ULR2   A0A0B4KI48   G1MA68   A0A3P4R7A1   G5AWU1   A0A2U3ZBB8   A0A2T7PHE3   S7NT47   A0A2T7PHE2   I3N0B0   A0A1S3FRL5   A0A1S3W223   A0A1A6GGP7   A0A2Y9E2P3   A0A287DCZ2   G3HX48   A0A1B0G3I6   G3SMY8   A0A1A9UNN9   G3SZS4   A0A060W723   A0A1A9ZFQ2   H0VPU7   W5NVZ5   A0A452F097   A0A267GS85   A0A2Y9KI96   B3LV78  

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0016021   GO:0016887   GO:0051959   GO:0005930   GO:0045503   GO:0008569   GO:0045505   GO:0003341   GO:0036156   GO:0005875   GO:0042623  

PANTHER

PTHR10676  

Length:

94

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.28011

Exp number, first 60 AAs:

0.00033

Total prob of N-in:

0.15433

outside

1  -  94

 

 

Pi

162.681213

Theta

131.61832

Tajima's D

0.741772

CLR

0.005145

CSRT

0.586220688965552

Interpretation

Uncertain