Gene

KWMTBOMO11371  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4417877-4418855      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.494 Nuclear   Reliability : 1.266 PlasmaMembrane   Reliability : 1.014

CDS

ATGACATTAGACTTGTATAAGATAATAATAGTAGAATTGCCTCCTACTCCGGCTAAGTTCCACTATATTTTCAATCTCCGTGACTTGTCTCGGATAGCGGCTGGCATGTGTCTGACACACGCGAACTACTTCAGCGAAAAACGTACAGTTGTTAGGTGCTGGAGGAATGAGTTCACCAGGGTCATATGCGATCGACTTATCAACCAACAGGTGATGTAA

Protein

MTLDLYKIIIVELPPTPAKFHYIFNLRDLSRIAAGMCLTHANYFSEKRTVVRCWRNEFTRVICDRLINQQVM

Uniprot

H9IX76   A0A0L7L8M6   A0A3S2LZK1   A0A2A4JUQ2   A0A2W1BD47   A0A212EHR2   + More
A0A2H1VR18   A0A194QEV0   A0A194RBR8   A0A1B6E9V8   A0A1B6DAB9   E0VQP2   A0A1B6KP24   A0A1B6F9S8   Q27806   A0A1I8NF00   A0A154PNN1   K7J323   A0A1I8PAD1   D6WU89   A0A084WBS3   W4ZLH9   A0A1B0C4S2   J9KYQ7   B0W463   A0A182QCK4   A0A1A9UNN9   A0A0Q9X9I4   B4K6Z4   A0A1A9ZFQ2   A0A182JSY3   A0A2C9JWZ0   A0A2C9JWZ8   A0A182PGJ2   B4MC48   V4BRT3   A0A182ML65   A0A182TQL6   A0A182WSM3   A0A182L9W2   Q7PUK6   A0A182ULR2   A0A182HLH3   A0A182NRZ8   A0A182RZ92   A0A3S1HDS1   A0A1I8HCA9   A0A1I8GN74   A0A1I8IK03   A0A267GW52   A0A0S4JGM8   A0A267GS85   A0A182IR22   B4JGP4   A0A182SS90   T2M9J2   A0A182Y3M9   A0A210Q0K8   K1R5R4   A0A1A9X2L4   A0A310SST6   A0A2R2MKY4   A0A0M4EPR1   A0A182VZG6   A0A1J1J5S5   A0A1S3HMR6   A7SK91   C3XV30   A0A182FQC7   A0A1W4W2L4   A0A1W4WEG6   B3LV78   A0A1A9XJK5   B4N8N4   F4WAD2   B4PQS1   H0Z416   A0A2T7PHE3   L5KTW9   N6TR49   A0A2K6VB31   U4U1Q7   E1JJ04   A0A3L8S573   Q9VAV5   A0A0B4KI48   A0A218UMB0   W5JGD3   W5K6M6   A0A3B0JD27   W5MFQ0   E4XH35   R7UWA6   B4G3H4   Q299Y5   I5ANL7   A0DCJ3   A0A1U8CX33   A0A0B6Z1D2   D7FMK5  

Pubmed

19121390    26227816    28756777    22118469    26354079    20566863    + More
8186465    25315136    20075255    18362917    19820115    24438588    17994087    15562597    23254933    20966253    12364791    14747013    17210077    26392545    24065732    25244985    28812685    22992520    26383154    17615350    18563158    21719571    17550304    20360741    23258410    23537049    20920257    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    30282656    25329095    21097902    15632085    23185243    17086204    20520714   

EMBL

BABH01018149    BABH01018150    BABH01018151    BABH01018152    BABH01018153    BABH01018154    + More
BABH01018155    BABH01018156    BABH01018157    BABH01018158    JTDY01002221    KOB71862.1    RSAL01000096    RVE47735.1    NWSH01000608    PCG75354.1    KZ150261    PZC71734.1    AGBW02014810    OWR41026.1    ODYU01003927    SOQ43291.1    KQ459053    KPJ04007.1    KQ460436    KPJ14720.1    GEDC01002595    JAS34703.1    GEDC01014670    JAS22628.1    DS235430    EEB15698.1    GEBQ01026768    JAT13209.1    GECZ01022793    JAS46976.1    U03973    AAA63587.1    KQ435007    KZC13452.1    KQ971352    EFA06783.2    ATLV01022432    ATLV01022433    KE525332    KFB47667.1    AAGJ04108843    AAGJ04108844    JXJN01025625    JXJN01025626    JXJN01025627    ABLF02029728    ABLF02029735    ABLF02055253    DS231835    EDS32907.1    AXCN02000261    CH933806    KRG01490.1    EDW15281.2    CH940656    EDW58669.2    KB202237    ESO91629.1    AXCM01008242    AAAB01008987    EAA01367.6    APCN01000900    RQTK01000590    RUS77325.1    NIVC01000119    PAA90251.1    CYKH01001759    CUG89679.1    NIVC01000173    PAA88873.1    CH916369    EDV92648.1    HAAD01002741    CDG68973.1    NEDP02005302    OWF42267.1    JH817887    EKC41048.1    KQ759770    OAD62940.1    CP012526    ALC46147.1    CVRI01000070    CRL07346.1    DS469685    EDO35852.1    GG666468    EEN67956.1    CH902617    EDV43610.2    CH964232    EDW81485.2    GL888048    EGI68815.1    CM000160    EDW98410.2    ABQF01047062    PZQS01000004    PVD32839.1    KB030576    ELK14268.1    APGK01057806    KB741282    ENN70796.1    KB631802    ERL86248.1    AE014297    ACZ95053.1    QUSF01000066    RLV96891.1    AAF56793.3    AGB96416.1    MUZQ01000225    OWK54873.1    ADMH02001601    ETN61879.1    OUUW01000005    SPP80284.1    AHAT01005142    AHAT01005143    FN653050    CBY09983.1    AMQN01006005    KB297391    ELU10552.1    CH479179    EDW24982.1    CM000070    EAL27566.4    EIM52553.2    EIM52552.2    CT868374    CAK80760.1    HACG01015372    CEK62237.1    FN648214    CBJ25902.1   

Proteomes

UP000005204    UP000037510    UP000283053    UP000218220    UP000007151    UP000053268    + More
UP000053240    UP000009046    UP000095301    UP000076502    UP000002358    UP000095300    UP000007266    UP000030765    UP000007110    UP000092460    UP000007819    UP000002320    UP000075886    UP000078200    UP000009192    UP000092445    UP000075881    UP000076420    UP000075885    UP000008792    UP000030746    UP000075883    UP000075902    UP000076407    UP000075882    UP000007062    UP000075903    UP000075840    UP000075884    UP000075900    UP000271974    UP000095280    UP000215902    UP000075880    UP000001070    UP000075901    UP000076408    UP000242188    UP000005408    UP000091820    UP000085678    UP000092553    UP000075920    UP000183832    UP000001593    UP000001554    UP000069272    UP000192221    UP000007801    UP000092443    UP000007798    UP000007755    UP000002282    UP000007754    UP000245119    UP000010552    UP000019118    UP000030742    UP000000803    UP000276834    UP000197619    UP000000673    UP000018467    UP000268350    UP000018468    UP000014760    UP000008744    UP000001819    UP000000600    UP000189705    UP000002630   

PRIDE

H9IX76    K1R5R4    E1JJ04    Q9VAV5   

Pfam

PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF08385   DHC_N1
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF07728   AAA_5
PF17921   Integrase_H2C2
PF00781   DAGK_cat
PF00241   Cofilin_ADF

Interpro

IPR042222   Dynein_2_N        + More
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR013594   Dynein_heavy_dom-1       
IPR042219   AAA_lid_11_sf       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR035699   AAA_6       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR026983   DHC_fam       
IPR011704   ATPase_dyneun-rel_AAA       
IPR001995   Peptidase_A2_cat       
IPR021109   Peptidase_aspartic_dom_sf       
IPR041588   Integrase_H2C2       
IPR002108   ADF-H       
IPR017904   ADF/Cofilin       
IPR017438   ATP-NAD_kinase_N       
IPR016064   NAD/diacylglycerol_kinase_sf       
IPR001206   Diacylglycerol_kinase_cat_dom       
IPR029006   ADF-H/Gelsolin-like_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF50630   SSF50630       
SSF111331   SSF111331       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20     2.40.70.10     3.40.20.10     3.40.50.10330    

CDD

cd11286  ADF_cofilin_like

ProteinModelPortal

H9IX76   A0A0L7L8M6   A0A3S2LZK1   A0A2A4JUQ2   A0A2W1BD47   A0A212EHR2   + More
A0A2H1VR18   A0A194QEV0   A0A194RBR8   A0A1B6E9V8   A0A1B6DAB9   E0VQP2   A0A1B6KP24   A0A1B6F9S8   Q27806   A0A1I8NF00   A0A154PNN1   K7J323   A0A1I8PAD1   D6WU89   A0A084WBS3   W4ZLH9   A0A1B0C4S2   J9KYQ7   B0W463   A0A182QCK4   A0A1A9UNN9   A0A0Q9X9I4   B4K6Z4   A0A1A9ZFQ2   A0A182JSY3   A0A2C9JWZ0   A0A2C9JWZ8   A0A182PGJ2   B4MC48   V4BRT3   A0A182ML65   A0A182TQL6   A0A182WSM3   A0A182L9W2   Q7PUK6   A0A182ULR2   A0A182HLH3   A0A182NRZ8   A0A182RZ92   A0A3S1HDS1   A0A1I8HCA9   A0A1I8GN74   A0A1I8IK03   A0A267GW52   A0A0S4JGM8   A0A267GS85   A0A182IR22   B4JGP4   A0A182SS90   T2M9J2   A0A182Y3M9   A0A210Q0K8   K1R5R4   A0A1A9X2L4   A0A310SST6   A0A2R2MKY4   A0A0M4EPR1   A0A182VZG6   A0A1J1J5S5   A0A1S3HMR6   A7SK91   C3XV30   A0A182FQC7   A0A1W4W2L4   A0A1W4WEG6   B3LV78   A0A1A9XJK5   B4N8N4   F4WAD2   B4PQS1   H0Z416   A0A2T7PHE3   L5KTW9   N6TR49   A0A2K6VB31   U4U1Q7   E1JJ04   A0A3L8S573   Q9VAV5   A0A0B4KI48   A0A218UMB0   W5JGD3   W5K6M6   A0A3B0JD27   W5MFQ0   E4XH35   R7UWA6   B4G3H4   Q299Y5   I5ANL7   A0DCJ3   A0A1U8CX33   A0A0B6Z1D2   D7FMK5  

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0016021   GO:0016887   GO:0045505   GO:0008569   GO:0005930   GO:0045503   GO:0051959   GO:0004190   GO:0003779   GO:0015629   GO:0003951   GO:0030042   GO:0042623   GO:0005875   GO:0036156   GO:0003341  

PANTHER

PTHR10676  

Length:

72

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.08467

Exp number, first 60 AAs:

0.08467

Total prob of N-in:

0.28758

outside

1  -  72

 

 

Pi

183.370732

Theta

128.364255

Tajima's D

1.345941

CLR

0.111123

CSRT

0.748512574371281

Interpretation

Uncertain