Gene

KWMTBOMO11370  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4399627-4406391      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.77

CDS

ATGCAGCTCGGAGGAGCTCCAGCCGGTCCCGCTGGTACCGGCAAAACCGAAACTACAAAAGATTTAGCAAAGGCTTTAGGTCTTCTATGCGTGGTGACCAACTGCGGGGAGGGAATGGATTTCCGAGCTGTTGGACAGATCCTCGCTGGCCTTTGCCAGTGCGGTGCTTGGGGATGCTTCGACGAATTCAACAGGATTGATATATCAGTGCTGTCAGTTATTTCAACGCAGCTACAGTGCATCAGAAGTGCTTTGCTCATGAAATTGAAACGTTTCACGTTTGAAGGGCAGGAGATAGCAATGGATAGCAAAGTTGGTATCTTTATCACCATGAATCCTGGATACGCCGGTCGAACGGAGTTACCTGAATCCGTGAAAGCTTTGTTCAGACCTGTCGTGTGTATTCTACCTGACCTTGAAATGATTTGTCAGATATCCCTATTCTCTGATGGATTTCTTACGGCCAAAGTTCTAGCCAAGAAAATGACAGTCCTATACAAAGTAGCAAGAGAACAACTATCAAAACAATCTCACTATGACTGGGGATTAAGGGCTCTAACGGCGGTCCTCAGGATGGCGGGGAAATTGAGAAGAGATTCCCCAGGACTCAGTGAAATTATGGTGCTGATGAGAGCTTTAAGGGACATGAACCATCCAAAATTCGTATTTGAAGACGTGCCTCTATTTCTTGGACTGATAAAAGACCTTTTCCCTGGGTTGGAGTGTCCTCGTGTTGGTTATCCAGAATTCAATGCTGCCGTTCTTGAGGTTTTAGAAAAAGATGGATATGTTGTACTACCGCATCAGGTTGATAAAGTGGTTCAACTTTACGAAACGATGATGACTAGACACTGTACGATGCTAGTGGGGCCCACGGGCGGCGGCAAGACGGTTATACTTCATTGTCTAGTGAAAGCTCAAACTAATTTAGGTCTACCTACAAAACTTACAGTTGTTAATCCAAAGGCCTGCTCCGTTATAGAGCTGTATGGTATCTTGGACCCTGTAACAAGAGACTGGACCGATGGTTTATATTCAAAAATATTTAGGGAAATGAACAGACCGGCAGAAAAGAATGAGCGTCGCTACTCATTATTCGATGGAGATGTAGACGCTCTTTGGATAGAGAACATGAATTCGGTAATGGACGATAACAAGCTCTTGACCCTCGCGAACGGAGAGCGAATCAGACTGGCCCCGTACTGCTCTTTACTCTTCGAAGTTGGAGATTTGAACTATGCCTCTCCGGCCACTGTTTCCAGAGCCGGAATGGTGTTCGTCGACCCTAAGAACTTGGGATACGAACCTTACTGGGAAAGGCACTTGTAA

Protein

MQLGGAPAGPAGTGKTETTKDLAKALGLLCVVTNCGEGMDFRAVGQILAGLCQCGAWGCFDEFNRIDISVLSVISTQLQCIRSALLMKLKRFTFEGQEIAMDSKVGIFITMNPGYAGRTELPESVKALFRPVVCILPDLEMICQISLFSDGFLTAKVLAKKMTVLYKVAREQLSKQSHYDWGLRALTAVLRMAGKLRRDSPGLSEIMVLMRALRDMNHPKFVFEDVPLFLGLIKDLFPGLECPRVGYPEFNAAVLEVLEKDGYVVLPHQVDKVVQLYETMMTRHCTMLVGPTGGGKTVILHCLVKAQTNLGLPTKLTVVNPKACSVIELYGILDPVTRDWTDGLYSKIFREMNRPAEKNERRYSLFDGDVDALWIENMNSVMDDNKLLTLANGERIRLAPYCSLLFEVGDLNYASPATVSRAGMVFVDPKNLGYEPYWERHL

Uniprot

H9IX76   A0A2A4J3H3   A0A212EHR2   A0A194RBR8   A0A194QEV0   A0A2H1VR18   + More
A0A2W1BD47   A0A3S2LZK1   U4U1Q7   N6TR49   D6WU89   A0A1A9UNN9   A0A1W4W2L4   E0VQP2   B4MC48   E1JJ04   Q9VAV5   B4IH10   A0A1W4WEG6   A0A3B0JD27   B4PQS1   B4N8N4   A0A182IR22   B4JGP4   A0A0B4KI48   A0A1B0C4S2   A0A0M4EPR1   Q7PUK6   A0A182L9W2   A0A182VZG6   A0A182RZ92   A0A182SS90   A0A182NRZ8   B4G3H4   B4K6Z4   I5ANL7   A0A1B6E9V8   A0A0Q9X9I4   B3LV78   A0A182PGJ2   A0A1B0FPJ7   A0A1B6DAB9   A0A1B6FUW5   A0A182TQL6   Q299Y5   A0A182QCK4   A0A1I8PAD1   A0A3M0JXR0   A0A182JSY3   A0A2C9JWZ8   A0A2C9JWZ0   A0A1D5PD16   B0W463   A0A1V4JSE1   A0A084WBS4   R7UWA6   A0A3L8S573   A0A151NS45   E7FGT8   A0A218UMB0   F7DW33   A0A1I8GN74   A0A267GW52   I3K6T1   A0A452I0T0   A0A452I0W3   W5K6M6   A0A1U8CX33   A0A091FLU3   A0A3Q2WFN5   R0LTG7   U3J391   U3K3Y5   A0A2I0M866   A0A087XTH1   A0A2G9SBI3   K1R5R4   A0A091VYL6   A0A3B3TNK4   A0A1J1J5S5   A0A1I8HCA9   Q27806   A0A3Q3MNV8   A0A094K0P6   A0A3B4E236   A0A3P9CLL7   G3P1E8   A0A3Q4MJC5   A0A287AF97   F1RFM8   A0A3B4GFI9   A0A2Y9FL08   A0A336KTI1   W5MFQ0   A0A3B4YPF3   H9GM01   A0A2A3ERY9   C3XV30   A0A1S3W223   A0A384AQQ9  

Pubmed

19121390    22118469    26354079    28756777    23537049    18362917    + More
19820115    20566863    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    12364791    14747013    17210077    20966253    15632085    23185243    15562597    15592404    24438588    23254933    30282656    22293439    23594743    20431018    26392545    25186727    28562605    25329095    23749191    23371554    22992520    8186465    21881562    18563158   

EMBL

BABH01018149    BABH01018150    BABH01018151    BABH01018152    BABH01018153    BABH01018154    + More
BABH01018155    BABH01018156    BABH01018157    BABH01018158    NWSH01003463    PCG66238.1    AGBW02014810    OWR41026.1    KQ460436    KPJ14720.1    KQ459053    KPJ04007.1    ODYU01003927    SOQ43291.1    KZ150261    PZC71734.1    RSAL01000096    RVE47735.1    KB631802    ERL86248.1    APGK01057806    KB741282    ENN70796.1    KQ971352    EFA06783.2    DS235430    EEB15698.1    CH940656    EDW58669.2    AE014297    ACZ95053.1    AAF56793.3    CH480837    EDW49128.1    OUUW01000005    SPP80284.1    CM000160    EDW98410.2    CH964232    EDW81485.2    CH916369    EDV92648.1    AGB96416.1    JXJN01025625    JXJN01025626    JXJN01025627    CP012526    ALC46147.1    AAAB01008987    EAA01367.6    CH479179    EDW24982.1    CH933806    EDW15281.2    CM000070    EIM52552.2    GEDC01002595    JAS34703.1    KRG01490.1    CH902617    EDV43610.2    CCAG010022515    GEDC01014670    JAS22628.1    GECZ01015781    JAS53988.1    EAL27566.4    EIM52553.2    AXCN02000261    QRBI01000121    RMC05733.1    AADN05000505    DS231835    EDS32907.1    LSYS01006629    OPJ75091.1    ATLV01022433    ATLV01022434    KE525332    KFB47668.1    AMQN01006005    KB297391    ELU10552.1    QUSF01000066    RLV96891.1    AKHW03002185    KYO39614.1    BX323557    MUZQ01000225    OWK54873.1    AAMC01042923    AAMC01042924    NIVC01000119    PAA90251.1    AERX01026833    AERX01026834    KL447264    KFO71450.1    KB742840    EOB03708.1    ADON01049977    ADON01049978    ADON01049979    AGTO01010316    AKCR02000030    PKK25878.1    AYCK01007726    KV926115    PIO37502.1    JH817887    EKC41048.1    KK734463    KFR08294.1    CVRI01000070    CRL07346.1    U03973    AAA63587.1    KL336764    KFZ50352.1    AEMK02000096    UFQS01000469    UFQT01000469    SSX04260.1    SSX24625.1    AHAT01005142    AHAT01005143    KZ288193    PBC34042.1    GG666468    EEN67956.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000283053    + More
UP000030742    UP000019118    UP000007266    UP000078200    UP000192221    UP000009046    UP000008792    UP000000803    UP000001292    UP000268350    UP000002282    UP000007798    UP000075880    UP000001070    UP000092460    UP000092553    UP000007062    UP000075882    UP000075920    UP000075900    UP000075901    UP000075884    UP000008744    UP000009192    UP000001819    UP000007801    UP000075885    UP000092444    UP000075902    UP000075886    UP000095300    UP000269221    UP000075881    UP000076420    UP000000539    UP000002320    UP000190648    UP000030765    UP000014760    UP000276834    UP000050525    UP000000437    UP000197619    UP000008143    UP000095280    UP000215902    UP000005207    UP000291020    UP000018467    UP000189705    UP000053760    UP000264840    UP000016666    UP000016665    UP000053872    UP000028760    UP000005408    UP000053605    UP000261500    UP000183832    UP000261640    UP000261440    UP000265160    UP000007635    UP000261580    UP000008227    UP000261460    UP000018468    UP000261360    UP000001646    UP000242457    UP000001554    UP000079721    UP000261681   

PRIDE

H9IX76    E1JJ04    Q9VAV5    K1R5R4    F1RFM8   

Pfam

PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF08385   DHC_N1
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF00781   DAGK_cat
PF00241   Cofilin_ADF

Interpro

IPR042222   Dynein_2_N        + More
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR013594   Dynein_heavy_dom-1       
IPR042219   AAA_lid_11_sf       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR035699   AAA_6       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR026983   DHC_fam       
IPR002108   ADF-H       
IPR017904   ADF/Cofilin       
IPR017438   ATP-NAD_kinase_N       
IPR016064   NAD/diacylglycerol_kinase_sf       
IPR001206   Diacylglycerol_kinase_cat_dom       
IPR029006   ADF-H/Gelsolin-like_dom_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF111331   SSF111331       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20     3.40.20.10     3.40.50.10330    

CDD

cd11286  ADF_cofilin_like

ProteinModelPortal

H9IX76   A0A2A4J3H3   A0A212EHR2   A0A194RBR8   A0A194QEV0   A0A2H1VR18   + More
A0A2W1BD47   A0A3S2LZK1   U4U1Q7   N6TR49   D6WU89   A0A1A9UNN9   A0A1W4W2L4   E0VQP2   B4MC48   E1JJ04   Q9VAV5   B4IH10   A0A1W4WEG6   A0A3B0JD27   B4PQS1   B4N8N4   A0A182IR22   B4JGP4   A0A0B4KI48   A0A1B0C4S2   A0A0M4EPR1   Q7PUK6   A0A182L9W2   A0A182VZG6   A0A182RZ92   A0A182SS90   A0A182NRZ8   B4G3H4   B4K6Z4   I5ANL7   A0A1B6E9V8   A0A0Q9X9I4   B3LV78   A0A182PGJ2   A0A1B0FPJ7   A0A1B6DAB9   A0A1B6FUW5   A0A182TQL6   Q299Y5   A0A182QCK4   A0A1I8PAD1   A0A3M0JXR0   A0A182JSY3   A0A2C9JWZ8   A0A2C9JWZ0   A0A1D5PD16   B0W463   A0A1V4JSE1   A0A084WBS4   R7UWA6   A0A3L8S573   A0A151NS45   E7FGT8   A0A218UMB0   F7DW33   A0A1I8GN74   A0A267GW52   I3K6T1   A0A452I0T0   A0A452I0W3   W5K6M6   A0A1U8CX33   A0A091FLU3   A0A3Q2WFN5   R0LTG7   U3J391   U3K3Y5   A0A2I0M866   A0A087XTH1   A0A2G9SBI3   K1R5R4   A0A091VYL6   A0A3B3TNK4   A0A1J1J5S5   A0A1I8HCA9   Q27806   A0A3Q3MNV8   A0A094K0P6   A0A3B4E236   A0A3P9CLL7   G3P1E8   A0A3Q4MJC5   A0A287AF97   F1RFM8   A0A3B4GFI9   A0A2Y9FL08   A0A336KTI1   W5MFQ0   A0A3B4YPF3   H9GM01   A0A2A3ERY9   C3XV30   A0A1S3W223   A0A384AQQ9  

PDB

4RH7     E-value=3.73151e-100,     Score=932

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0016021   GO:0042623   GO:0005875   GO:0036156   GO:0008569   GO:0003341   GO:0051959   GO:0005930   GO:0045503   GO:0045505   GO:0016887   GO:0003779   GO:0015629   GO:0003951   GO:0030042   GO:0008061   GO:0016791   GO:0016620   GO:0046034   GO:0032559   GO:0004812   GO:0006418   GO:0003824  

PANTHER

PTHR10676  

Length:

442

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01154

Exp number, first 60 AAs:

0.00348

Total prob of N-in:

0.00078

outside

1  -  442

 

 

Pi

273.316617

Theta

171.259321

Tajima's D

1.586384

CLR

0.644548

CSRT

0.805109744512774

Interpretation

Uncertain