Gene

KWMTBOMO11369  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4393557-4395510      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.277

CDS

ATGTTTGCAATGGAATTGCACAAGTATCAAGATGTTGCTGAAGAAATCGTTAATCATGCTATAAAGGAACTGGCTATTGAACGCGGAGTTAAAGACGTACAAGAAACTTGGGCGAACATTTCGTTTAGTGTATCCAGACACTTCAACAGAGGGGAAGACCGTGGCTACACCCTCAATCCGTGCGACGATATAGTTGTGAAGCTAGACGATGATTCCATGTCTCTCCAAAGTATGGCAGCTTCACAATTCATTGGACCATTTTTAACGGTAGTCCAAACATGGGAACATCGACTGTCTCTGATATCTGAAATAATTGAGGAATGGATGGCGACTCAAAGAAAGTGGCTTTACCTAGAAGGCATATTCGTTGGGGGAGATATACGTACACAGCTGCCTGAAGAGGCCAAAAAATTTGATGACATCGATAGGGCTTTTAGGAAGGATTAG

Protein

MFAMELHKYQDVAEEIVNHAIKELAIERGVKDVQETWANISFSVSRHFNRGEDRGYTLNPCDDIVVKLDDDSMSLQSMAASQFIGPFLTVVQTWEHRLSLISEIIEEWMATQRKWLYLEGIFVGGDIRTQLPEEAKKFDDIDRAFRKD

Uniprot

H9IX76   A0A3S2LZK1   A0A2A4J3H3   A0A2W1BD47   A0A2H1VR18   A0A194RBR8   + More
A0A194QEV0   A0A212EHR2   A0A1A9ZFQ4   A0A1B6KPB9   A0A1I8PAD1   A0A0L0CEV9   A0A1I8MA86   B4JGP4   N6TR49   U4U1Q7   A0A1B0C4S2   B4MC48   B4PQS1   B4N8N4   A0A1B0FPJ7   A0A3P8FQG4   A0A1W4W2L4   A0A183PQP8   A0A1W4WEG6   A0A3B0JD27   B4K6Z4   A0A0Q9X9I4   E1JJ04   Q9VAV5   A0A0B4KI48   D6WU89   B4G3H4   I5ANL7   Q299Y5   B3LV78   B4IH10   A0A0M4EPR1   H3BAL0   A0A2J7QWX6   W5MFQ0   A0A1B6E9V8   A0A1B6DAB9   A0A0N8JY00   A0A1W4ZUV9   E2AN69   A2BG35   E7FGT8   F7CP57   A0A182QI99   A0A1S3PFH5   A0A1S3PEP0   A0A401SZC5   A0A183QLE3   G4M187   A0A2T7PHE3   A0A182IR22   A0A3B3QK43   E0VQP2   A0A0J7L4X0   K7FM63   A0A1J1J5S5   A0A452I0T0   G3WU97   A0A452I0W3   A0A2D0PL14   A0A2D0PNR9   A0A151NS45   A0A1U8CX33   A0A154PNN1   A0A3B4E236   A0A3N0XJC6   H9GM01   B0W463   M7BIQ2   A0A182PGJ2   A0A402F8C2   A0A310SST6   A0A182S9T2   A0A195E3E9   A0A3P9A2D6   K7J323   A0A0N0U4V3   A0A3B4UD57   V4BRT3   A0A195CSD5   A0A151I1T7   A0A151WV17   A0A1L8I0W3   A0A158NL89   A0A3L8DJJ8   A0A026WMF7   A0A2G9SBI3   A0A1A9UNN9   A0A088ANX7   A0A2A3ERY9   A0A182Y3M9   A0A287AF97   A0A095AHA3   A0A182L9W2  

Pubmed

19121390    28756777    26354079    22118469    26108605    25315136    + More
17994087    23537049    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    18362917    19820115    15632085    23185243    9215903    20798317    23594743    18464734    30297745    22253936    29240929    20566863    17381049    28562605    21709235    22293439    21881562    23624526    25069045    20075255    23254933    27762356    21347285    30249741    24508170    25244985    22246508    20966253   

EMBL

BABH01018149    BABH01018150    BABH01018151    BABH01018152    BABH01018153    BABH01018154    + More
BABH01018155    BABH01018156    BABH01018157    BABH01018158    RSAL01000096    RVE47735.1    NWSH01003463    PCG66238.1    KZ150261    PZC71734.1    ODYU01003927    SOQ43291.1    KQ460436    KPJ14720.1    KQ459053    KPJ04007.1    AGBW02014810    OWR41026.1    GEBQ01026687    JAT13290.1    JRES01000501    KNC30752.1    CH916369    EDV92648.1    APGK01057806    KB741282    ENN70796.1    KB631802    ERL86248.1    JXJN01025625    JXJN01025626    JXJN01025627    CH940656    EDW58669.2    CM000160    EDW98410.2    CH964232    EDW81485.2    CCAG010022515    UZAL01037539    VDP72051.1    OUUW01000005    SPP80284.1    CH933806    EDW15281.2    KRG01490.1    AE014297    ACZ95053.1    AAF56793.3    AGB96416.1    KQ971352    EFA06783.2    CH479179    EDW24982.1    CM000070    EIM52552.2    EAL27566.4    EIM52553.2    CH902617    EDV43610.2    CH480837    EDW49128.1    CP012526    ALC46147.1    AFYH01016331    AFYH01016332    AFYH01016333    AFYH01016334    AFYH01016335    AFYH01016336    AFYH01016337    AFYH01016338    AFYH01016339    AFYH01016340    NEVH01009413    PNF33091.1    AHAT01005142    AHAT01005143    GEDC01002595    JAS34703.1    GEDC01014670    JAS22628.1    JARO02006505    KPP65153.1    GL441102    EFN65120.1    BX323557    AXCN02000261    BEZZ01000738    GCC35741.1    CABG01000099    CCD60905.1    PZQS01000004    PVD32839.1    DS235430    EEB15698.1    LBMM01000749    KMQ97578.1    AGCU01061902    AGCU01061903    AGCU01061904    AGCU01061905    AGCU01061906    AGCU01061907    AGCU01061908    AGCU01061909    AGCU01061910    AGCU01061911    CVRI01000070    CRL07346.1    AEFK01071704    AEFK01071705    AEFK01071706    AEFK01071707    AEFK01071708    AEFK01071709    AEFK01071710    AEFK01071711    AEFK01071712    AEFK01071713    AKHW03002185    KYO39614.1    KQ435007    KZC13452.1    RJVU01073043    ROI27764.1    DS231835    EDS32907.1    KB523138    EMP37074.1    BDOT01000138    GCF52688.1    KQ759770    OAD62940.1    KQ979701    KYN19673.1    KQ435796    KOX73524.1    KB202237    ESO91629.1    KQ977306    KYN03638.1    KQ976551    KYM80860.1    KQ982718    KYQ51703.1    CM004466    OCU02010.1    ADTU01018995    ADTU01018996    QOIP01000007    RLU20605.1    KK107152    EZA57210.1    KV926115    PIO37502.1    KZ288193    PBC34042.1    AEMK02000096    KL250542    KGB33311.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000092445    UP000095300    UP000037069    UP000095301    UP000001070    UP000019118    UP000030742    UP000092460    UP000008792    UP000002282    UP000007798    UP000092444    UP000192221    UP000050791    UP000268350    UP000009192    UP000000803    UP000007266    UP000008744    UP000001819    UP000007801    UP000001292    UP000092553    UP000008672    UP000235965    UP000018468    UP000034805    UP000192224    UP000000311    UP000000437    UP000002279    UP000075886    UP000087266    UP000287033    UP000050792    UP000008854    UP000245119    UP000075880    UP000261540    UP000009046    UP000036403    UP000007267    UP000183832    UP000291020    UP000007648    UP000221080    UP000050525    UP000189705    UP000076502    UP000261440    UP000001646    UP000002320    UP000031443    UP000075885    UP000288954    UP000075901    UP000078492    UP000265140    UP000002358    UP000053105    UP000261420    UP000030746    UP000078542    UP000078540    UP000075809    UP000186698    UP000005205    UP000279307    UP000053097    UP000078200    UP000005203    UP000242457    UP000076408    UP000008227    UP000075882   

PRIDE

H9IX76    E1JJ04    Q9VAV5   

Pfam

PF12781   AAA_9        + More
PF12774   AAA_6
PF08393   DHC_N2
PF08385   DHC_N1
PF17857   AAA_lid_1
PF12777   MT
PF18199   Dynein_C
PF17852   Dynein_AAA_lid
PF18198   AAA_lid_11
PF12780   AAA_8
PF03028   Dynein_heavy
PF01496   V_ATPase_I
PF07773   DUF1619
PF03850   Tfb4
PF07728   AAA_5

Interpro

IPR042222   Dynein_2_N        + More
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR027417   P-loop_NTPase       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR013594   Dynein_heavy_dom-1       
IPR042219   AAA_lid_11_sf       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR035699   AAA_6       
IPR041228   Dynein_C       
IPR042228   Dynein_2_C       
IPR041658   AAA_lid_11       
IPR026983   DHC_fam       
IPR036465   vWFA_dom_sf       
IPR011677   DUF1619       
IPR004600   TFIIH_Tfb4/GTF2H3       
IPR002490   V-ATPase_116kDa_su       
IPR011704   ATPase_dyneun-rel_AAA       

SUPFAM

SSF52540   SSF52540       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20     3.40.50.410    

ProteinModelPortal

H9IX76   A0A3S2LZK1   A0A2A4J3H3   A0A2W1BD47   A0A2H1VR18   A0A194RBR8   + More
A0A194QEV0   A0A212EHR2   A0A1A9ZFQ4   A0A1B6KPB9   A0A1I8PAD1   A0A0L0CEV9   A0A1I8MA86   B4JGP4   N6TR49   U4U1Q7   A0A1B0C4S2   B4MC48   B4PQS1   B4N8N4   A0A1B0FPJ7   A0A3P8FQG4   A0A1W4W2L4   A0A183PQP8   A0A1W4WEG6   A0A3B0JD27   B4K6Z4   A0A0Q9X9I4   E1JJ04   Q9VAV5   A0A0B4KI48   D6WU89   B4G3H4   I5ANL7   Q299Y5   B3LV78   B4IH10   A0A0M4EPR1   H3BAL0   A0A2J7QWX6   W5MFQ0   A0A1B6E9V8   A0A1B6DAB9   A0A0N8JY00   A0A1W4ZUV9   E2AN69   A2BG35   E7FGT8   F7CP57   A0A182QI99   A0A1S3PFH5   A0A1S3PEP0   A0A401SZC5   A0A183QLE3   G4M187   A0A2T7PHE3   A0A182IR22   A0A3B3QK43   E0VQP2   A0A0J7L4X0   K7FM63   A0A1J1J5S5   A0A452I0T0   G3WU97   A0A452I0W3   A0A2D0PL14   A0A2D0PNR9   A0A151NS45   A0A1U8CX33   A0A154PNN1   A0A3B4E236   A0A3N0XJC6   H9GM01   B0W463   M7BIQ2   A0A182PGJ2   A0A402F8C2   A0A310SST6   A0A182S9T2   A0A195E3E9   A0A3P9A2D6   K7J323   A0A0N0U4V3   A0A3B4UD57   V4BRT3   A0A195CSD5   A0A151I1T7   A0A151WV17   A0A1L8I0W3   A0A158NL89   A0A3L8DJJ8   A0A026WMF7   A0A2G9SBI3   A0A1A9UNN9   A0A088ANX7   A0A2A3ERY9   A0A182Y3M9   A0A287AF97   A0A095AHA3   A0A182L9W2  

PDB

3VKH     E-value=2.46047e-14,     Score=185

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0030286   GO:0007018   GO:0003777   GO:0005524   GO:0016021   GO:0042623   GO:0005875   GO:0036156   GO:0008569   GO:0003341   GO:0016887   GO:0045503   GO:0051959   GO:0045505   GO:0005930   GO:0015991   GO:0033179   GO:0015078   GO:0006355   GO:0006289   GO:0000439  

PANTHER

PTHR10676  

Length:

148

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02635

Exp number, first 60 AAs:

0

Total prob of N-in:

0.18930

outside

1  -  148

 

 

Pi

187.955184

Theta

142.98371

Tajima's D

0.84489

CLR

0

CSRT

0.616119194040298

Interpretation

Uncertain