Gene

KWMTBOMO11368  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001859

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_dynein_heavy_chain_10?_axonemal-like_[Bombyx_mori]

Location

Bomo_Chr19(+):4387357-4389940      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 3.107

CDS

ATGGTTTTATGGCATAAATATCAACACTTGTGGGCATTCGACAAGAGTCTTTCCTGCGAGAAATACATTCAGAAACACGAACAAATATATAAATACGATGAGAAATTCTTCTTTTTCGAAGATATAATTTCAGATCTCAATACACATGTCAAGTTTGTTGATGTCGGAGCGGTGCGAGTGAATCTGAGGCCAATTATAAAGCAAATACAAGATCATGCTTTAGAATGGAAGAATATTTTAGGCAATTGCATTGCTTCTAAAACCAAAATGAACATGTATGATTTGAAGAACCAAATTGAAAGTCTTCGGATGACAATAAACATGAATATTAAAGGTTTAGAAGATTTCAAATTAGTAATGGCGACCATCACACAAGTACAACAAATGACGATAACTGCAGAAGTGAAATACCGCGGTATGCAGGAAATATTCCACATGTTGAAACAGCACGGTATAAATGTGACAGACGAAGACTTACAATTTGCTAAGAGCCTCGAAGCGTCTTGGGGTAGTCTATACCAAACTTCGTTGTTCCGCGGGAACACATTGGAACAAACAAAAGAGAAATTCTCCAAGTTGAATGTTGTTGAGATATCGAATTTCCTCAAAGAACTCGACGATTTCGTGGAAAAGTTCGATAACGAAGGACCGGCGACTGTGGAAGACGATATGGATAGAGGGTTACTGCTTATGGAGGTAACATATACTTGA

Protein

MVLWHKYQHLWAFDKSLSCEKYIQKHEQIYKYDEKFFFFEDIISDLNTHVKFVDVGAVRVNLRPIIKQIQDHALEWKNILGNCIASKTKMNMYDLKNQIESLRMTINMNIKGLEDFKLVMATITQVQQMTITAEVKYRGMQEIFHMLKQHGINVTDEDLQFAKSLEASWGSLYQTSLFRGNTLEQTKEKFSKLNVVEISNFLKELDDFVEKFDNEGPATVEDDMDRGLLLMEVTYT

Uniprot

A0A3S2LZK1   A0A194RBR8   A0A194QEV0   A0A2A4J3H3   A0A2W1BD47   A0A2H1VR18   + More
H9IX76   A0A212EHR2   D6WU89   A0A182VFF5   A0A084WBS4   A0A182IR22   A0A026WMF7   A0A3L8DJJ8   A0A182TQL6   Q7PUK6   A0A182WSM3   A0A182HLH3   A0A182L9W2   A0A182FQC7   A0A182NRZ8   K7J323   A0A182VZG6   A0A182PGJ2   U4U1Q7   E0VQP2   A0A182Y3M9   N6TR49   E2BZ31   A0A195CSD5   A0A0L0CEV9   A0A1I8MA86   E2AN69   A0A195E3E9   B0W463   A0A2J7QWX6   A0A0J7L515   B3LV78   A0A1I8PAD1   A0A151WV17   A0A195FRS5   A0A310SST6   A0A182K9N1   A0A154PNN1   A0A158NL89   A0A0M9A0R0   F4WAD3   B4N8N4   A0A151I1T7   B4G3H4   I5ANL7   Q299Y5   B4JGP4   A0A182RZ92   A0A2K6VB31   A0A3B0JD27   E1JJ04   Q9VAV5   A0A0B4KI48   A0A1W4W2L4   B4PQS1   A0A0Q9X9I4   B4K6Z4   B4MC48   A0A2A3ERY9   A0A088ANX7   A0A0M4EPR1   A0A1B0FPJ7   A0A1B6FHD2   A0A2U3ZBB8   A0A3Q7QTA6   A0A3Q1LNB4   F1MSP8   A0A384BX88   A0A452SER6   A0A452T7D0   A0A3Q7WZU2   A0A2Y9HRD6   M3XQT2   A0A452F048   A0A452F097   A0A3Q0D7M3   F7ABZ6   D3YYQ8   W5NVZ5   A0A1X7UQA9   A0A341CKM5   G1MA68   J9JHE6   F1PMG2   E2RMJ8   A0A1L8I0W3   A0A3Q7U4P3   A0A2Y9KI96   A0A0N8JY00   A0A1W4ZUV9   L5KSQ7  

Pubmed

26354079    28756777    19121390    22118469    18362917    19820115    + More
24438588    24508170    30249741    12364791    14747013    17210077    20966253    20075255    23537049    20566863    25244985    20798317    26108605    25315136    17994087    21347285    21719571    15632085    23185243    20920257    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    19393038    24813606    19468303    21183079    20809919    20010809    16341006    27762356    23258410   

EMBL

RSAL01000096    RVE47735.1    KQ460436    KPJ14720.1    KQ459053    KPJ04007.1    + More
NWSH01003463    PCG66238.1    KZ150261    PZC71734.1    ODYU01003927    SOQ43291.1    BABH01018149    BABH01018150    BABH01018151    BABH01018152    BABH01018153    BABH01018154    BABH01018155    BABH01018156    BABH01018157    BABH01018158    AGBW02014810    OWR41026.1    KQ971352    EFA06783.2    ATLV01022433    ATLV01022434    KE525332    KFB47668.1    KK107152    EZA57210.1    QOIP01000007    RLU20605.1    AAAB01008987    EAA01367.6    APCN01000900    KB631802    ERL86248.1    DS235430    EEB15698.1    APGK01057806    KB741282    ENN70796.1    GL451555    EFN79033.1    KQ977306    KYN03638.1    JRES01000501    KNC30752.1    GL441102    EFN65120.1    KQ979701    KYN19673.1    DS231835    EDS32907.1    NEVH01009413    PNF33091.1    LBMM01000749    KMQ97579.1    CH902617    EDV43610.2    KQ982718    KYQ51703.1    KQ981281    KYN43305.1    KQ759770    OAD62940.1    KQ435007    KZC13452.1    ADTU01018995    ADTU01018996    KQ435796    KOX73523.1    GL888048    EGI68816.1    CH964232    EDW81485.2    KQ976551    KYM80860.1    CH479179    EDW24982.1    CM000070    EIM52552.2    EAL27566.4    EIM52553.2    CH916369    EDV92648.1    OUUW01000005    SPP80284.1    AE014297    ACZ95053.1    AAF56793.3    AGB96416.1    CM000160    EDW98410.2    CH933806    KRG01490.1    EDW15281.2    CH940656    EDW58669.2    KZ288193    PBC34042.1    CP012526    ALC46147.1    CCAG010022515    GECZ01020179    JAS49590.1    AEYP01033312    AEYP01033313    AEYP01033314    AEYP01033315    AEYP01033316    AEYP01033317    LWLT01000018    AC164649    AC242457    AMGL01039153    AMGL01039154    AMGL01039155    AMGL01039156    AMGL01039157    AMGL01039158    AMGL01039159    ACTA01040599    ACTA01048599    AAEX03014636    AAEX03014637    CM004466    OCU02010.1    JARO02006505    KPP65153.1    KB030576    ELK14270.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000218220    UP000005204    UP000007151    + More
UP000007266    UP000075903    UP000030765    UP000075880    UP000053097    UP000279307    UP000075902    UP000007062    UP000076407    UP000075840    UP000075882    UP000069272    UP000075884    UP000002358    UP000075920    UP000075885    UP000030742    UP000009046    UP000076408    UP000019118    UP000008237    UP000078542    UP000037069    UP000095301    UP000000311    UP000078492    UP000002320    UP000235965    UP000036403    UP000007801    UP000095300    UP000075809    UP000078541    UP000075881    UP000076502    UP000005205    UP000053105    UP000007755    UP000007798    UP000078540    UP000008744    UP000001819    UP000001070    UP000075900    UP000268350    UP000000803    UP000192221    UP000002282    UP000009192    UP000008792    UP000242457    UP000005203    UP000092553    UP000092444    UP000245340    UP000286641    UP000009136    UP000261680    UP000291022    UP000291021    UP000286642    UP000248481    UP000000715    UP000291000    UP000189706    UP000000589    UP000002356    UP000007879    UP000252040    UP000008912    UP000002254    UP000186698    UP000286640    UP000248482    UP000034805    UP000192224    UP000010552   

PRIDE

H9IX76    E1JJ04    Q9VAV5    F7ABZ6    D3YYQ8   

Pfam

PF17857   AAA_lid_1        + More
PF12777   MT
PF08385   DHC_N1
PF17852   Dynein_AAA_lid
PF18199   Dynein_C
PF12780   AAA_8
PF18198   AAA_lid_11
PF03028   Dynein_heavy
PF12781   AAA_9
PF08393   DHC_N2
PF12774   AAA_6
PF07728   AAA_5

Interpro

IPR035699   AAA_6        + More
IPR042228   Dynein_2_C       
IPR041228   Dynein_C       
IPR041658   AAA_lid_11       
IPR003593   AAA+_ATPase       
IPR041466   Dynein_AAA5_ext       
IPR013594   Dynein_heavy_dom-1       
IPR004273   Dynein_heavy_D6_P-loop       
IPR013602   Dynein_heavy_dom-2       
IPR042219   AAA_lid_11_sf       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR027417   P-loop_NTPase       
IPR042222   Dynein_2_N       
IPR041589   DNAH3_AAA_lid_1       
IPR035706   AAA_9       
IPR026983   DHC_fam       
IPR011704   ATPase_dyneun-rel_AAA       

SUPFAM

SSF52540   SSF52540       

Gene 3D

1.10.8.720     1.20.140.100     3.20.180.20    

ProteinModelPortal

A0A3S2LZK1   A0A194RBR8   A0A194QEV0   A0A2A4J3H3   A0A2W1BD47   A0A2H1VR18   + More
H9IX76   A0A212EHR2   D6WU89   A0A182VFF5   A0A084WBS4   A0A182IR22   A0A026WMF7   A0A3L8DJJ8   A0A182TQL6   Q7PUK6   A0A182WSM3   A0A182HLH3   A0A182L9W2   A0A182FQC7   A0A182NRZ8   K7J323   A0A182VZG6   A0A182PGJ2   U4U1Q7   E0VQP2   A0A182Y3M9   N6TR49   E2BZ31   A0A195CSD5   A0A0L0CEV9   A0A1I8MA86   E2AN69   A0A195E3E9   B0W463   A0A2J7QWX6   A0A0J7L515   B3LV78   A0A1I8PAD1   A0A151WV17   A0A195FRS5   A0A310SST6   A0A182K9N1   A0A154PNN1   A0A158NL89   A0A0M9A0R0   F4WAD3   B4N8N4   A0A151I1T7   B4G3H4   I5ANL7   Q299Y5   B4JGP4   A0A182RZ92   A0A2K6VB31   A0A3B0JD27   E1JJ04   Q9VAV5   A0A0B4KI48   A0A1W4W2L4   B4PQS1   A0A0Q9X9I4   B4K6Z4   B4MC48   A0A2A3ERY9   A0A088ANX7   A0A0M4EPR1   A0A1B0FPJ7   A0A1B6FHD2   A0A2U3ZBB8   A0A3Q7QTA6   A0A3Q1LNB4   F1MSP8   A0A384BX88   A0A452SER6   A0A452T7D0   A0A3Q7WZU2   A0A2Y9HRD6   M3XQT2   A0A452F048   A0A452F097   A0A3Q0D7M3   F7ABZ6   D3YYQ8   W5NVZ5   A0A1X7UQA9   A0A341CKM5   G1MA68   J9JHE6   F1PMG2   E2RMJ8   A0A1L8I0W3   A0A3Q7U4P3   A0A2Y9KI96   A0A0N8JY00   A0A1W4ZUV9   L5KSQ7  

KEGG

101747012    K10408 dynein heavy chain, axonemal | (RefSeq) dynein heavy chain 10, axonemal-like

GO

GO:0007018   GO:0003777   GO:0005524   GO:0030286   GO:0016021   GO:0051959   GO:0005930   GO:0045503   GO:0008569   GO:0045505   GO:0016887   GO:0042623   GO:0005875   GO:0036156   GO:0003341  

PANTHER

PTHR10676  

Length:

236

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00232

Exp number, first 60 AAs:

0.00065

Total prob of N-in:

0.06274

outside

1  -  236

 

 

Pi

255.4521

Theta

173.405365

Tajima's D

1.482511

CLR

0.23595

CSRT

0.779211039448028

Interpretation

Uncertain