SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11367
Pre Gene Modal
BGIBMGA001858
Annotation
PREDICTED:_uncharacterized_protein_LOC101747150_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.626
 

Sequence

CDS
ATGGTAATCCCAAGGACTATAGAACATATCGAAGGCGAAATCCACTTTCCGATGCCGGACATCCCAGCCCTGATGGACGAACAGCGGGGTCGGGTAGGCTTCAATGACCCAGCACTCACGAAGCAATTGGAGGAAGCAGTGATGATGTGGCAAAACCACATCGATACGACTATTGCTGCTTGTTTGGGCAAGGTATGTATTGTTCCAGAAAGCAGTATAGATTTAGGGGGGGATTCGGTGATTCTAGTATTTGCGAGGAGTCTAGAAGAAGAAGAAGAAGGAGTCTAG
Protein
MVIPRTIEHIEGEIHFPMPDIPALMDEQRGRVGFNDPALTKQLEEAVMMWQNHIDTTIAACLGKVCIVPESSIDLGGDSVILVFARSLEEEEEGV

Summary

Pfam
PF12781   AAA_9        + More
PF08393   DHC_N2
PF12774   AAA_6
PF12777   MT
PF17857   AAA_lid_1
PF08385   DHC_N1
PF17852   Dynein_AAA_lid
PF12780   AAA_8
PF03028   Dynein_heavy
PF18199   Dynein_C
PF18198   AAA_lid_11
Interpro
IPR035706   AAA_9        + More
IPR041589   DNAH3_AAA_lid_1       
IPR042222   Dynein_2_N       
IPR027417   P-loop_NTPase       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR024743   Dynein_HC_stalk       
IPR013602   Dynein_heavy_dom-2       
IPR004273   Dynein_heavy_D6_P-loop       
IPR026983   DHC_fam       
IPR013594   Dynein_heavy_dom-1       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR042228   Dynein_2_C       
IPR035699   AAA_6       
IPR041658   AAA_lid_11       
IPR041228   Dynein_C       
IPR042219   AAA_lid_11_sf       
SUPFAM
SSF52540   SSF52540       
Gene 3D
PDB
1M70     E-value=0.0216943,     Score=82

Ontologies

Topology

Length:
95
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00377
Exp number, first 60 AAs:
0.00093
Total prob of N-in:
0.24651
outside
1  -  95
 
 

Population Genetic Test Statistics

Pi
193.447733
Theta
105.504219
Tajima's D
2.500373
CLR
0
CSRT
0.946702664866757
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号