SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11362
Pre Gene Modal
BGIBMGA001962
Annotation
Receptor-type_tyrosine-protein_phosphatase_kappa_[Papilio_machaon]
Location
Bomo_Chr19(-):4136003-4173383      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.908
 

Sequence

CDS
ATGTTTTTACACCACATTAAATACTTGTTAGGAAGGAAGGAGAAACTTGTTGTGGTGCTTTATATAAAAGATTTGACTCGATATATCGGTTGTGCCTATGCGGACGAGAATGGTTCCATATCCGAGACGATACCGGACCGACCTGTCGAGCTAAAGAACTTCACGAAGCTCTGCGAACAGCGACGGAAGTTTCCAGTGCTTTACAAACTCGAGTTTCAGACTGCGATCAAGGTCGAGATGCAGTTGTGCCGGCACGCAACGAAGAAGACAAATCTACACAAAAATCAGAATCAAAAAGTTATACCTTATGATTACAACAGAGTGGTGCTAGACACTATAGACCGGGAACCAGACTCGGATTATATAAACGCTTCTTACATAGATAGTTTATTAAAGCCTAAGGCGTACATAGTAACTCAGGGGCCAACCGAAGACACAGTCGTGGATTTCTGGCGGATGATCTGGCAGGAACGAGCCGCCGCCATTGTCATGCTCACTAAGACATTCGACTTCATTAAAGTTATGTGCGTCCAGTATTGGCCACCAAACAAAGAGAAAGATGAAACGTACGGAGACATCAGCGTCGGCATCGTGCAAGAAGAGGAACTCGCCAATTTCTTCATAAGAACCTTCCGACTTTATAAGACTGAGAAGGGTGTGGTGATAGAAGAGAGGTTCATTCTGCAGTTCCATTATACGCAGTGGCATTCTCACACGTGTCCATTCAGCAACGCGCTCCTCGAGTTCAGGAGACGTGTCAGAGCGGTGGTTGGCAGGAGGCTGGCCGTCAACCCTGCAGCAGGACCCATGGTCGTGCACTGCAATGATGGTGGAGGTAGATCGGGCGTGTACTTAGCTATCGACGCGAATTTGGAACTAGCTGAAGAGGAAGACAGCTTTGATGTCTTCGGATGTTTGAAAAAACTCCGGGAATCCCGAAAAGGGCTTATTGAAAACGAGGAACAATACAAATTTGTCTACGATACGTTAGAGGAACACGTCGTCTGCGGTATTTCATGGTTTCCAGTCTCCGAACTGTCGCAAAGGCTGAAGCAAAAATCCCAGAGGGACCCCGTCACGAAGCTCAATGAATACCAAAAGGAATACCAGCAAATATGTAAACAAACACCGAGGTTCACGATAGGGGATTGCGCTGGAGGCCATCGAGGTGATAATCGGGAAAAGAACCGCGATGTGCTAGTGGTGCCCCCTGACAATTTTCGTCCCTATTTGACATCATTTCAAGGAAACAGTTTCACTGATTACATCAACGCCGTGTTCGTGGATGGATACACCAAGCCTCGTGAGTACATAGTGACGGAATGGCCTCTGATGATGACTCAAGGGGAGTTTTGGTCTTTAGTATACGATTATGAATGCGCTGCGGTCGTTGTTTTATGTGTTCCACCGAAGAATTCTCAACAATACCCGCCGTTTTGGCCCGAGGGACGGCATTCTAAGAAATATGGACCAGTTTTTACAATAGATCACGTATCTCATAATCATTATACTAATATTAAGACTTGGATATTTAGGATCAATAAGAAGATAATTTCACTGACTGAACTGATGGCTGGAGTCAAAGCTCCAACGAAAACAGTGCAACTATTCCAATTGACGTGTTGGCCAATGGGCCACAAGGTTCCGTCATCGACCAATTCACTAGTGGAGCTGATGAACATGGTGGAACGCTGGCGACAGCGGACAGACTACGGACCAGTCTGCGTTGTATCACCGGATGGACGCAGCCGGGCCGGGGTCTACTGCGCAGCCAACGCGTGCATCGAACAAGTCATAAAGCACGGCGAGGTGGACGTGTTTCAAGCTGTGAAGACTGTTCGACGACACCGGCCACAGCTCGTCGAGAACATGACCGAATACAAGTACTGCTACGATCTAGTTCTCCATTACGTGTTGCACTATTTAAATAAAGATATGAACGAAAAAAACCCCTCCGCGGCGCCGCGCGACCACAAGCGGCCCCAGCGCCCTCGCCGCGGGCTCTCTCTGGACCGCCTGCTGCCCGCGCCCGCTCGTCCTCAGCTGCCGCACGCCGCTACCGTCGAAGCCCCTCGTCGTCCCCGTCGGGACCGCCCTCCGCTGCGTCGCTCTATTCGCCTTGAAGACGACGACGCCGCGGCGGATGAACGCAGGCGAGCCTTTGGCCGCGGACCTCGAGCCCCCTCCTTCGACGAAGGCGACGTCAGCGACGAGCACGAGGAATGCGATTGCGCCCGCGTCTCTCTCGAGCGCTCCGGCCCTTCCACCGAAGCGCCCGACGAAGATGACTACGAACCAGAATTTGTCGCCTCTCCGCCGTACCTGTGCGATAGGCCGACGCCGGAACTGCCGCCTCGAGCCGGTTCCTCGGATCGAGTTTTGGAACCCCGAGATGCACCCCGCGGTCCGTCGCGTGCCCATTCGCAAGGTGTTTTCGAAAGACGATTGCCAAAAATTTATAAATTCGGTTTAATGGACAAATCGAAACGAGCCAGTTCGAGCGCTCTTTACGAACGGGCCCCTCGCTCTCCGACCGAAGCTTTTTATAACGCTACCGGATCTACGAGACTGAGCTCCCAAGAGCTTTTCGAGAAATTCTGTTCAGAGGATTTTACCTCCTTATATGGACGCGAAGATGATCGGCGCAAGCGACCGCCACACTCGAAATCGACCGGCAGCAGCGGCTCCGACGTCCGACACGAACGTACGTGCTGTCGACGCACACCGTGCAGCTCCCAGCCTGCTCTCGGCCGCCGCCACATGTGCCATGCAGCAAGATCTGACCGCTCGACTGATTCCGAGGACATGTCACCGCACCGCGCCGGAATGAGACCGTTACCACTGGAGTCAGATCGTGATGGTCAACAATCTAACTGTTCACGTTCTGCGCCTCTTTTGAGTCCGGACCGTTTTGAAGCTCGTTTCACATTCGACATCTCGGAACGCAGCGAAGCCACATCAAACCGAGACGAGACCCCTTCGGATGCTACCGAAACGAGGAATCTGACTCTTTACGAAGAACCACATTCGGATCGAACCAGTCTCTGTGAGCTTTATGACGCTGCGTTTTCTTCACAACGACCTTCATTTCGAAGAGACGGATCTCGTCGTCACGCGGGTGTCGTAGATTTGAGCGCGCTTAATTTTCGCGCCATTGACGACGAAAGTCCCCGTGCCAGTCGACGCACATCCCAACGGAGCGTCGATGAAACGCTACGTCAGAATTCTGAGACGCGCAGCTGGGCATCAGATTCCGTATTCACGACTCCGGAACGACGTTTCCCTGCGGCATCTTCGCCATCCTCCGATGGCACACATCTCTCTGTTACCGCGCAAGCTGAATCCCCGCGTGCTGATTCAGCTGCGGCCGACTCCACCATCGCCGACACGACTGTCGTCGAAGAGGAACCGCCAAGCGTGATAGAACGAACAGAATACACACTCGCTCTGAAGCTCGGACGTATTGACCTGGAAGACGAACCGTCCGAGAGAAACTCCACACCGGCGGGGGGAAGTGCGCGTCTTTCGAGTCGCCCATCGATGCACAAGCTAGAACCAATCGAGCCGGAGCGTCTGTGCGGTGGCGCTAGTGAGGCGGCGAGTGTGCGGTCAGTGCGCGCGGTGCTGCGGCGTCGCGGTGCCAGCGAGCCGCGCCGATCCTCGCGCTGCTTCCCGCTCTGA
Protein
MFLHHIKYLLGRKEKLVVVLYIKDLTRYIGCAYADENGSISETIPDRPVELKNFTKLCEQRRKFPVLYKLEFQTAIKVEMQLCRHATKKTNLHKNQNQKVIPYDYNRVVLDTIDREPDSDYINASYIDSLLKPKAYIVTQGPTEDTVVDFWRMIWQERAAAIVMLTKTFDFIKVMCVQYWPPNKEKDETYGDISVGIVQEEELANFFIRTFRLYKTEKGVVIEERFILQFHYTQWHSHTCPFSNALLEFRRRVRAVVGRRLAVNPAAGPMVVHCNDGGGRSGVYLAIDANLELAEEEDSFDVFGCLKKLRESRKGLIENEEQYKFVYDTLEEHVVCGISWFPVSELSQRLKQKSQRDPVTKLNEYQKEYQQICKQTPRFTIGDCAGGHRGDNREKNRDVLVVPPDNFRPYLTSFQGNSFTDYINAVFVDGYTKPREYIVTEWPLMMTQGEFWSLVYDYECAAVVVLCVPPKNSQQYPPFWPEGRHSKKYGPVFTIDHVSHNHYTNIKTWIFRINKKIISLTELMAGVKAPTKTVQLFQLTCWPMGHKVPSSTNSLVELMNMVERWRQRTDYGPVCVVSPDGRSRAGVYCAANACIEQVIKHGEVDVFQAVKTVRRHRPQLVENMTEYKYCYDLVLHYVLHYLNKDMNEKNPSAAPRDHKRPQRPRRGLSLDRLLPAPARPQLPHAATVEAPRRPRRDRPPLRRSIRLEDDDAAADERRRAFGRGPRAPSFDEGDVSDEHEECDCARVSLERSGPSTEAPDEDDYEPEFVASPPYLCDRPTPELPPRAGSSDRVLEPRDAPRGPSRAHSQGVFERRLPKIYKFGLMDKSKRASSSALYERAPRSPTEAFYNATGSTRLSSQELFEKFCSEDFTSLYGREDDRRKRPPHSKSTGSSGSDVRHERTCCRRTPCSSQPALGRRHMCHAARSDRSTDSEDMSPHRAGMRPLPLESDRDGQQSNCSRSAPLLSPDRFEARFTFDISERSEATSNRDETPSDATETRNLTLYEEPHSDRTSLCELYDAAFSSQRPSFRRDGSRRHAGVVDLSALNFRAIDDESPRASRRTSQRSVDETLRQNSETRSWASDSVFTTPERRFPAASSPSSDGTHLSVTAQAESPRADSAAADSTIADTTVVEEEPPSVIERTEYTLALKLGRIDLEDEPSERNSTPAGGSARLSSRPSMHKLEPIEPERLCGGASEAASVRSVRAVLRRRGASEPRRSSRCFPL

Summary

Catalytic Activity
H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate
Uniprot
H9IXH9   A0A194RA56   A0A194QEV5   A0A3S2L7W2  
Pubmed
19121390    26354079   
EMBL
BABH01018179    BABH01018180    KQ460436    KPJ14723.1    KQ459053    KPJ04012.1    + More
RSAL01000096    RVE47731.1   
Proteomes
UP000005204    UP000053240    UP000053268    UP000283053   
PRIDE
H9IXH9   
Pfam
PF00102   Y_phosphatase
Interpro
IPR000387   TYR_PHOSPHATASE_dom        + More
IPR000242   PTPase_domain       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR003595   Tyr_Pase_cat       
IPR016130   Tyr_Pase_AS       
SUPFAM
SSF52799   SSF52799       
Gene 3D
3.90.190.10    
ProteinModelPortal
H9IXH9   A0A194RA56   A0A194QEV5   A0A3S2L7W2  
PDB
2FH7     E-value=2.81756e-80,     Score=765

Ontologies

KEGG
101735492    no KO assigned | (RefSeq) receptor-type tyrosine-protein phosphatase kappa
GO
GO:0004725   GO:0016021   GO:0006470   GO:0016311   GO:0016791   GO:0016620   GO:0046034   GO:0032559   GO:0004812   GO:0006418   GO:0003824  

Topology

Length:
1226
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0033
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.00015
outside
1  -  1226
 
 

Population Genetic Test Statistics

Pi
224.552636
Theta
182.994606
Tajima's D
0.878441
CLR
0.22085
CSRT
0.626368681565922
Interpretation
Uncertain
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