Gene

KWMTBOMO11346

Pre Gene Modal

BGIBMGA001969

Annotation

PREDICTED:_A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_16_[Bombyx_mori]

Location

Bomo_Chr19(-):3830176-3832044      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.629 Nuclear   Reliability : 1.485

CDS

ATGTTCTGTATCAGCGGAATATGTCAGAAATTTACGTGCTCTTCGACCGTTGATTCGGAGTTCTCGCTGAAACCGAGCGACTGTGAATGGGAAGCTTTACAGGCAGCGCCTACCGAGTCGACCGCTCGCGGCAAGTCGTCGGGTCCGTGGCGGCGCGCGGCCGAGTGGGTGGCGGCGAGCGGCTGCCACTACCACTGCATCGCGCCCGGCGCCGGCCTGCGCCTCGTGCGCGCCGCCGCCTCGCCGCGCACCTCCATACAGCTGTGCGCGCCCGCCGCCGCGCAGCCGCACCGGGTACGTCACCACTACCAAGGGTGGGATCTTTGGACTCTAGCTGAATCTTCTCACGAGAGCTGA

Protein

MFCISGICQKFTCSSTVDSEFSLKPSDCEWEALQAAPTESTARGKSSGPWRRAAEWVAASGCHYHCIAPGAGLRLVRAAASPRTSIQLCAPAAAQPHRVRHHYQGWDLWTLAESSHES

Uniprot

H9IXI6   A0A194QW27   A0A194QEY4   A0A2W1BSJ3   A0A437BRI0   A0A2A4IYQ3   + More
A0A212F8C6   U4UKR6   N6SSR5   D6WRW7   A0A1Y1LAA0   A0A1Y1LDZ5   A0A1W4XI84   A0A2J7R4U0   A0A2J7R4T8   A0A067RCW6   A0A3Q0IN80   A0A2R7WVJ4   A0A1B6KZR4   J9JTN6   A0A0A9XI82   A0A2P8ZBQ6   A0A182XEH7   A0A1B6EY69   A0A0A9XN21   A0A0A9XCR4   A0A0A9XCQ9   A0A0A9XN17   A0A0A9XEU1   A0A2Y9D2Y1   A0A182UJG2   A0A182HQM0   A0A182KNP2   A0A2S2RB68   A0A182YR46   A0A2S2QNX1   A0A182S8R9   A0A2H8TN60   A0A182H310   Q7Q7Y1   A0A182KDL2   A0A2S2P9A4   E0VAR6   A0A171B5B0   A0A1S4FP70   A0A2S2PIE9   A0A224XBQ2   A0A1B0GKN0   A0A182PUX0   A0A182RE58  

Pubmed

19121390    26354079    28756777    22118469    23537049    18362917    + More
19820115    28004739    24845553    25401762    29403074    20966253    25244985    26483478    12364791    14747013    17210077    20566863   

EMBL

BABH01018208    BABH01018209    BABH01018210    KQ461073    KPJ09514.1    KQ459053    + More
KPJ04103.1    KZ149913    PZC78038.1    RSAL01000016    RVE53006.1    NWSH01005320    PCG64292.1    AGBW02009752    OWR49996.1    KB632370    ERL93707.1    APGK01058444    APGK01058445    APGK01058446    KB741288    ENN70714.1    KQ971351    EFA06592.2    GEZM01061283    JAV70569.1    GEZM01061282    JAV70570.1    NEVH01007402    PNF35841.1    PNF35840.1    KK852718    KDR17787.1    KK855696    PTY23577.1    GEBQ01023021    JAT16956.1    ABLF02023476    GBHO01025096    GBHO01025091    JAG18508.1    JAG18513.1    PYGN01000114    PSN53910.1    GECZ01026783    JAS42986.1    GBHO01025094    JAG18510.1    GBHO01025092    JAG18512.1    GBHO01025097    GBHO01025093    JAG18507.1    JAG18511.1    GBHO01025099    JAG18505.1    GBHO01025095    JAG18509.1    APCN01004658    GGMS01018001    MBY87204.1    GGMS01010263    MBY79466.1    GFXV01003798    MBW15603.1    JXUM01024343    JXUM01024344    JXUM01024345    KQ560687    KXJ81277.1    AAAB01008948    EAA10377.4    GGMR01013424    MBY26043.1    DS235014    EEB10472.1    GEMB01000258    JAS02857.1    GGMR01016602    MBY29221.1    GFTR01006631    JAW09795.1    AJWK01030743    AJWK01030744   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000218220    UP000007151    + More
UP000030742    UP000019118    UP000007266    UP000192223    UP000235965    UP000027135    UP000079169    UP000007819    UP000245037    UP000076407    UP000075903    UP000075902    UP000075840    UP000075882    UP000076408    UP000075901    UP000069940    UP000249989    UP000007062    UP000075881    UP000009046    UP000092461    UP000075885    UP000075900   

PRIDE

H9IXI6   

Pfam

PF17771   ADAM_CR_2        + More
PF01421   Reprolysin
PF01562   Pep_M12B_propep

Interpro

IPR041645   ADAM_CR_2        + More
IPR024079   MetalloPept_cat_dom_sf       
IPR000884   TSP1_rpt       
IPR036383   TSP1_rpt_sf       
IPR001590   Peptidase_M12B       
IPR002870   Peptidase_M12B_N       

SUPFAM

SSF82895   SSF82895       

Gene 3D

2.20.100.10     3.40.390.10    

ProteinModelPortal

H9IXI6   A0A194QW27   A0A194QEY4   A0A2W1BSJ3   A0A437BRI0   A0A2A4IYQ3   + More
A0A212F8C6   U4UKR6   N6SSR5   D6WRW7   A0A1Y1LAA0   A0A1Y1LDZ5   A0A1W4XI84   A0A2J7R4U0   A0A2J7R4T8   A0A067RCW6   A0A3Q0IN80   A0A2R7WVJ4   A0A1B6KZR4   J9JTN6   A0A0A9XI82   A0A2P8ZBQ6   A0A182XEH7   A0A1B6EY69   A0A0A9XN21   A0A0A9XCR4   A0A0A9XCQ9   A0A0A9XN17   A0A0A9XEU1   A0A2Y9D2Y1   A0A182UJG2   A0A182HQM0   A0A182KNP2   A0A2S2RB68   A0A182YR46   A0A2S2QNX1   A0A182S8R9   A0A2H8TN60   A0A182H310   Q7Q7Y1   A0A182KDL2   A0A2S2P9A4   E0VAR6   A0A171B5B0   A0A1S4FP70   A0A2S2PIE9   A0A224XBQ2   A0A1B0GKN0   A0A182PUX0   A0A182RE58  

KEGG

101736552    no KO assigned | (RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 16

GO

GO:0004222   GO:0007229   GO:0016021  

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0233

Exp number, first 60 AAs:

0.00647

Total prob of N-in:

0.21920

outside

1  -  118

 

 

Pi

303.18403

Theta

151.466408

Tajima's D

3.931372

CLR

0.373113

CSRT

0.99830008499575

Interpretation

Uncertain