Gene

KWMTBOMO11345

Pre Gene Modal

BGIBMGA001969

Annotation

PREDICTED:_A_disintegrin_and_metalloproteinase_with_thrombospondin_motifs_16_[Bombyx_mori]

Location

Bomo_Chr19(-):3826102-3829424      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.119

CDS

ATGGTCTGCAGCAAATACAAAGAACGCGTCAGAAGATTATCAGGCCTCGGCATGCAGATATCGCCGGCTCTAGAGGACCCGGACCGGCCGTGCCGCATCGCGTGCCAGGACGAGCGCGTCGCGCACCGCTTCTACTTGGTCAACGGGCACGAGGGCTGGTTCCCGCTGGGCACGGCCTGCGGGCACAACAACGCCTCCTACTGCGTCAGCGGGAAGTGCTTGGAGTTCGGCGGAGACAACACCCCGGTCCCGGAGACGGTGTACGCGCTGCCGCTGCTGCCGCGCCGCGTCACCCGCAGCCTCACCGCGCGGATCGACGTCTCGCACCTCGACGACCTCATCACCGCGCTCAACCTCACACATACCCCGGAGGCTCACATAACGTACTACGACAGTATACCAGACAACGTCGAAGTGGACTTCAACAATCCCATACACATATCTCCGGAGGACACGTTATTGAGGAAAAAACAGAGACCGACGTGGGACTGA

Protein

MVCSKYKERVRRLSGLGMQISPALEDPDRPCRIACQDERVAHRFYLVNGHEGWFPLGTACGHNNASYCVSGKCLEFGGDNTPVPETVYALPLLPRRVTRSLTARIDVSHLDDLITALNLTHTPEAHITYYDSIPDNVEVDFNNPIHISPEDTLLRKKQRPTWD

Uniprot

H9IXI6   A0A437ARJ2   A0A194QEY4   A0A2W1BSJ3   A0A194QW27   A0A2A4IYQ3   + More
A0A212F8C6   U4UKR6   N6SSR5   A0A067RCW6   D6WRW7   A0A2J7R4U0   A0A1Y1LAA0   A0A1Y1LDZ5   A0A1B6EY69   A0A2J7R4T8   E0VAR6   A0A1S4FP70   A0A182H310   A0A182JFI6   Q16TY3   A0A2Y9D2Y1   A0A182XEH7   A0A182N1Y1   A0A1B0D865   A0A182WM27   A0A1A9ZX31   A0A182HQM0   A0A182UJG2   Q7Q7Y1   A0A1B0GKN0   A0A0A9XI82   A0A0A9XN21   A0A0L0CKU5   A0A0A9XCR4   B4I8B2   Q8T3M5   A0A2S2QNX1   A0A034V3Q9   A0A2S2P9A4   W8APV3   A0A1B0EUB2   A0A2S2RB68   A0A1A9VA32   A0A1A9XAQ9   A0A1B0BN75   J9JTN6   A0A1A9WYG6   B4P5T4   B4J412   A0A2S2PIE9   A0A336KUH1   B4MQA0   A0A3B0IY20   A0A0K8VW49   A0A336MQA6   A0A2H8TN60   A0A1I8PMI4   A0A0A1X1I4   B4LIV2   A0A0Q9W4L5   A0A1W4VQL9   Q8T458   A0A0M3QVE7   B4GAH9   A0A0K8U7W2   Q291N2   B3NNW2   A0A0J9RJ86   B4QHN1   Q9W1Z6   B4KPC0   A0A3B0JHX5   A0A3B0IYE1   B3MEJ2   A0A182YR46   A0A182S8R9  

Pubmed

19121390    26354079    28756777    22118469    23537049    24845553    + More
18362917    19820115    28004739    20566863    26483478    17510324    12364791    14747013    17210077    25401762    26108605    17994087    25348373    24495485    17550304    25830018    18057021    15632085    23185243    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25244985   

EMBL

BABH01018208    BABH01018209    BABH01018210    RSAL01004745    RVE40099.1    KQ459053    + More
KPJ04103.1    KZ149913    PZC78038.1    KQ461073    KPJ09514.1    NWSH01005320    PCG64292.1    AGBW02009752    OWR49996.1    KB632370    ERL93707.1    APGK01058444    APGK01058445    APGK01058446    KB741288    ENN70714.1    KK852718    KDR17787.1    KQ971351    EFA06592.2    NEVH01007402    PNF35841.1    GEZM01061283    JAV70569.1    GEZM01061282    JAV70570.1    GECZ01026783    JAS42986.1    PNF35840.1    DS235014    EEB10472.1    JXUM01024343    JXUM01024344    JXUM01024345    KQ560687    KXJ81277.1    CH477637    EAT37983.1    AJVK01027234    APCN01004658    AAAB01008948    EAA10377.4    AJWK01030743    AJWK01030744    GBHO01025096    GBHO01025091    JAG18508.1    JAG18513.1    GBHO01025094    JAG18510.1    JRES01000264    KNC32866.1    GBHO01025092    JAG18512.1    CH480824    EDW56837.1    AY094759    AAM11112.1    GGMS01010263    MBY79466.1    GAKP01022185    GAKP01022184    GAKP01022181    JAC36767.1    GGMR01013424    MBY26043.1    GAMC01018498    JAB88057.1    CCAG010013080    GGMS01018001    MBY87204.1    JXJN01017228    ABLF02023476    CM000158    EDW91850.2    CH916367    EDW02618.1    GGMR01016602    MBY29221.1    UFQS01000762    UFQT01000762    SSX06703.1    SSX27049.1    CH963849    EDW74289.1    OUUW01000001    SPP72824.1    GDHF01009210    JAI43104.1    UFQT01000946    SSX28158.1    GFXV01003798    MBW15603.1    GBXI01009335    JAD04957.1    CH940648    EDW61455.1    KRF79993.1    KRF79994.1    KRF79995.1    KRF79996.1    AY089340    AAL90078.1    CP012524    ALC42289.1    CH479181    EDW31931.1    GDHF01029869    JAI22445.1    CM000071    EAL25080.2    KRT01835.1    KRT01836.1    CH954179    EDV56695.2    CM002911    KMY95877.1    CM000362    EDX08260.1    AE013599    AAF46905.2    AFH08222.1    CH933808    EDW09096.2    SPP72826.1    SPP72825.1    CH902619    EDV37612.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000053240    UP000218220    UP000007151    + More
UP000030742    UP000019118    UP000027135    UP000007266    UP000235965    UP000009046    UP000069940    UP000249989    UP000075880    UP000008820    UP000075903    UP000076407    UP000075884    UP000092462    UP000075920    UP000092445    UP000075840    UP000075902    UP000007062    UP000092461    UP000037069    UP000001292    UP000092444    UP000078200    UP000092443    UP000092460    UP000007819    UP000091820    UP000002282    UP000001070    UP000007798    UP000268350    UP000095300    UP000008792    UP000192221    UP000092553    UP000008744    UP000001819    UP000008711    UP000000304    UP000000803    UP000009192    UP000007801    UP000076408    UP000075901   

PRIDE

H9IXI6    Q8T3M5    Q8T458    Q9W1Z6   

Pfam

PF17771   ADAM_CR_2        + More
PF01421   Reprolysin
PF01562   Pep_M12B_propep

Interpro

IPR041645   ADAM_CR_2        + More
IPR024079   MetalloPept_cat_dom_sf       
IPR000884   TSP1_rpt       
IPR036383   TSP1_rpt_sf       
IPR001590   Peptidase_M12B       
IPR002870   Peptidase_M12B_N       

SUPFAM

SSF82895   SSF82895       

Gene 3D

2.20.100.10     3.40.390.10    

ProteinModelPortal

H9IXI6   A0A437ARJ2   A0A194QEY4   A0A2W1BSJ3   A0A194QW27   A0A2A4IYQ3   + More
A0A212F8C6   U4UKR6   N6SSR5   A0A067RCW6   D6WRW7   A0A2J7R4U0   A0A1Y1LAA0   A0A1Y1LDZ5   A0A1B6EY69   A0A2J7R4T8   E0VAR6   A0A1S4FP70   A0A182H310   A0A182JFI6   Q16TY3   A0A2Y9D2Y1   A0A182XEH7   A0A182N1Y1   A0A1B0D865   A0A182WM27   A0A1A9ZX31   A0A182HQM0   A0A182UJG2   Q7Q7Y1   A0A1B0GKN0   A0A0A9XI82   A0A0A9XN21   A0A0L0CKU5   A0A0A9XCR4   B4I8B2   Q8T3M5   A0A2S2QNX1   A0A034V3Q9   A0A2S2P9A4   W8APV3   A0A1B0EUB2   A0A2S2RB68   A0A1A9VA32   A0A1A9XAQ9   A0A1B0BN75   J9JTN6   A0A1A9WYG6   B4P5T4   B4J412   A0A2S2PIE9   A0A336KUH1   B4MQA0   A0A3B0IY20   A0A0K8VW49   A0A336MQA6   A0A2H8TN60   A0A1I8PMI4   A0A0A1X1I4   B4LIV2   A0A0Q9W4L5   A0A1W4VQL9   Q8T458   A0A0M3QVE7   B4GAH9   A0A0K8U7W2   Q291N2   B3NNW2   A0A0J9RJ86   B4QHN1   Q9W1Z6   B4KPC0   A0A3B0JHX5   A0A3B0IYE1   B3MEJ2   A0A182YR46   A0A182S8R9  

KEGG

101736552    no KO assigned | (RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 16

GO

GO:0004222   GO:0007229   GO:0016021   GO:0008270   GO:0048477   GO:0030713   GO:0001541   GO:2001223  

Length:

163

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00235

Exp number, first 60 AAs:

0.00161

Total prob of N-in:

0.51918

inside

1  -  163

 

 

Pi

168.221563

Theta

75.816135

Tajima's D

0.177592

CLR

0

CSRT

0.421128943552822

Interpretation

Uncertain