SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11343
Pre Gene Modal
BGIBMGA001850
Annotation
PREDICTED:_lipid_phosphate_phosphohydrolase_2-like_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.764
 

Sequence

CDS
ATGGTGGCACTCTGCCGTCGGCTCGGCTCTGATCCGGTGCAGGAACTCACCGAAGCAACCATGCCCATGCTTGCTCTCATCGGTTTGTTCGAGTTGGGCATCATACCGAACAGAAAAGCGGGTTTCTTCTGTAACGATGCTGCTATATCCTTCGACTACACAGGAGAGACGGTGACCAGCCTCATCCTTATGACAACTATATTCATAATACCTATCGGAGTTTTCATGATAACAGAATATATATTCACACCTAACGAAATACCACTGTCGGATAGAACGATGAGGGCCTTCCTGAAGAGCTCGTGGCTTTTCAAAACGTACTTATACGGCTTCATGATGAACCTTTGCATCGTGGAAGTTATGAAGGGTATCGTTGGTAATCCAAGACCTGTGTTCTTCGCGCTGTGCCAACCAGACACTGCTAAGACGTGTAACGGCACGGATTTCGTGAGTACTTTCGAGTGCACGTCATCGTACTCCCGCTGGTACCGGATGGATTCGTATCGGAGTTTTCCGTCGGGGCACACATCGTTGTCCGTATACTGCGGGTTTTTCCTGGCGTGGTACCTTCAAAAGCGGGCCTTCAACTGGTCCTACCGCTCCGAGCTGGTGGTCCCGGTGGTCCAGCTCCTCTGCGTGTCGTACTCCGTGCTGTGCTCGCTCACCAGGATCACGGACCGCATGCACCACTGGTGGGACGTCCTGATCGGATCCGCCATTGGACTGATCACTTTGTTGTACACCGTGATATTTTTAAACGACAACTTCTCGTACTTCAACACGAGCGACTCAGGGGAGGAGGGGGGTACCGCGCCCACGAGAACAGTATTATTCGATGAAAGAAGAGATAGCTAA
Protein
MVALCRRLGSDPVQELTEATMPMLALIGLFELGIIPNRKAGFFCNDAAISFDYTGETVTSLILMTTIFIIPIGVFMITEYIFTPNEIPLSDRTMRAFLKSSWLFKTYLYGFMMNLCIVEVMKGIVGNPRPVFFALCQPDTAKTCNGTDFVSTFECTSSYSRWYRMDSYRSFPSGHTSLSVYCGFFLAWYLQKRAFNWSYRSELVVPVVQLLCVSYSVLCSLTRITDRMHHWWDVLIGSAIGLITLLYTVIFLNDNFSYFNTSDSGEEGGTAPTRTVLFDERRDS

Summary

EMBL
BABH01018212    BABH01018213    ODYU01001069    SOQ36793.1    KZ149913    PZC78036.1    + More
NWSH01002206    PCG68907.1    PCG68908.1    KQ461073    KPJ09516.1    KQ459053    KPJ04101.1    RSAL01000016    RVE53008.1    AGBW02009413    OWR50889.1    ODYU01006616    SOQ48618.1    AGBW02008985    OWR51977.1    KPJ04099.1    PZC78034.1    ODYU01003520    SOQ42415.1    NWSH01001933    PCG69634.1    RSAL01000611    RVE41309.1    JTDY01000163    KOB78502.1    LADI01014042    KPJ20781.1    AJWK01017073    NWSH01003358    PCG66487.1    KPJ04098.1    ODYU01007532    SOQ50384.1    SOQ42412.1    KZ150379    PZC71102.1    GFDF01002715    JAV11369.1    GFDF01002648    JAV11436.1    GFDF01002716    JAV11368.1    GFDF01002647    JAV11437.1    GFDF01002717    JAV11367.1    GFDF01002646    JAV11438.1    GFDF01002720    JAV11364.1    GDAI01001339    JAI16264.1    GFDF01002714    JAV11370.1    GFDF01002707    JAV11377.1    GFDF01002721    JAV11363.1    KQ982580    KYQ54478.1    GFDF01002650    JAV11434.1    KK107474    EZA50179.1    QOIP01000002    RLU26107.1    CVRI01000020    CRK90725.1    CRK90726.1    KPJ09519.1    GL440100    EFN66283.1    AJVK01004036    GFXV01007771    MBW19576.1    KM507106    AKM28430.1    PYGN01000114    PSN53890.1    KQ435012    KZC13765.1    KQ979657    KYN19920.1    ABLF02039852    ABLF02039853    APCN01000689    AAAB01008944    KQ981523    KYN40333.1    GDIQ01080349    JAN14388.1    GDIQ01248100    JAK03625.1    KQ976731    KYM76183.1    KQ414663    KOC65407.1    GDIQ01190773    JAK60952.1    GDIQ01244157    JAK07568.1    GDKW01003444    JAI53151.1    GDIQ01080348    JAN14389.1    KQ761467    OAD57510.1    ADTU01007015    ADTU01007016    ADTU01007017    ADTU01007018    ADTU01007019    ADTU01007020    ADTU01007021    ADTU01007022    ADTU01007023    GL887707    EGI70310.1    GDIP01068101    JAM35614.1    LRGB01002076    KZS09305.1    AXCN02002201    BT127551    AEE62513.1    GDIP01023027    JAM80688.1    KB632367    ERL93668.1    APGK01045770    APGK01045771    KB741039    ENN74515.1    KZ288347    PBC27575.1    GDHC01004283    JAQ14346.1    GBHO01033783    GBHO01013264    JAG09821.1    JAG30340.1    GGFJ01007456    MBW56597.1    GDHC01003057    JAQ15572.1    ATLV01013474    KE524860    KFB38015.1    GECZ01029757    GECZ01012517    GECZ01011154    GECZ01005000    JAS40012.1    JAS57252.1    JAS58615.1    JAS64769.1    GGFL01003244    MBW67422.1    GGFL01003241    MBW67419.1    KK852718    KDR17784.1    GGFL01003242    MBW67420.1    GL732534    EFX84528.1    GEZM01026250    GEZM01026249    JAV87095.1    GEZM01026252    GEZM01026251    JAV87092.1   
Pfam
PF01569   PAP2
Interpro
IPR000326   P_Acid_Pase_2/haloperoxidase        + More
IPR036938   P_Acid_Pase_2/haloperoxi_sf       
SUPFAM
SSF48317   SSF48317       

Ontologies

Topology

Length:
284
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
114.1379
Exp number, first 60 AAs:
10.90832
Total prob of N-in:
0.55581
POSSIBLE N-term signal
sequence
outside
1  -  59
TMhelix
60  -  82
inside
83  -  102
TMhelix
103  -  125
outside
126  -  170
TMhelix
171  -  190
inside
191  -  202
TMhelix
203  -  225
outside
226  -  229
TMhelix
230  -  252
inside
253  -  284
 
 

Population Genetic Test Statistics

Pi
219.281203
Theta
166.846566
Tajima's D
1.278848
CLR
0.389905
CSRT
0.732813359332033
Interpretation
Uncertain
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