Gene

KWMTBOMO11338

Pre Gene Modal

BGIBMGA001974

Annotation

ionotropic_receptor_[Ostrinia_furnacalis]

Location

Bomo_Chr19(-):3559480-3563734      View in EpiBrowser

Full name

Chloride channel protein      

Location in the cell

Mitochondrial   Reliability : 1.279

CDS

ATGAAATTTGTTACTTTTCTTATGATAACGATTTGGGCCCGCGTGGTGCTCACAAAGGATGCGAACTTGGTGGATTTTCTTAAAACTTACGTGGATAATGAGAGAAAACCTACAATGGTTGTGTTGACGGGCCTTTGTTGGAAAAAAGACAGAGTGCGTAATCTAGTAGCTGATCTGTCAAAGCTTGGAATTAGGACATCGAAGCCTCCGTCTATAGATATACAATCCAAATACCACGTCGTCATGCACAATACATTGTTCCTGAACGATTTGCATTGTCCCGAAACGGCAGAGGTCATTGAAACTGCTATTCTACATAATCTATTTCGGTATCCTCTACGGTGGCTTTTGCTGAAAAACATGTCCGAAAACTCTTCTGTCATACTTGAAGACATACCCGCGTTTGCAGACAGCGATTTAGTCTTAGCAGAAATAACAGAAGAATTAATTTTACTTACTGAATTGCACAAACCGAATGAGAACGGCGCGTTGATATCAAAAGATAAAGGTTACTACAACGGAACTATGGTAGACGTTAGACCGCATCGAGAACTCTTCAAACGGCGCAGAGACGTGATGGGTCGTCCATTGACAATGGCGAATGTTATACAAGACAGCAACAACACTCGTTATCATCTGCCTAGGGAGGATGCCTTGGAACTCCAGTACGACGTTATTCCTAAAATCTGCTGGATGACCGCGAAGCTAGCGTTCCAAATGTTAAATGCCACTCCTCGGTACACCTTCAGCTATCGTTGGGGGTATAAAGTGAACGGGCAATGGTCGGGGATGATCAACGATTTGCACACCAGTAAAGCCGATTTGGGTAAGACTTAA

Protein

MKFVTFLMITIWARVVLTKDANLVDFLKTYVDNERKPTMVVLTGLCWKKDRVRNLVADLSKLGIRTSKPPSIDIQSKYHVVMHNTLFLNDLHCPETAEVIETAILHNLFRYPLRWLLLKNMSENSSVILEDIPAFADSDLVLAEITEELILLTELHKPNENGALISKDKGYYNGTMVDVRPHRELFKRRRDVMGRPLTMANVIQDSNNTRYHLPREDALELQYDVIPKICWMTAKLAFQMLNATPRYTFSYRWGYKVNGQWSGMINDLHTSKADLGKT

Similarity

Belongs to the chloride channel (TC 2.A.49) family.

Uniprot

A0A2W1B5Q5   A0A0F7QEH8   A0A0S1TK20   E5FIA9   A0A2H1VKZ8   A0A2W1BCP8   + More
A0A140G9H4   A0A2K8GL81   A0A0F7QED4   A0A3S2LDH7   A0A2A4J494   A0A076E9E5   A0A212FC55   A0A2A4JCF7   A0A194QGN2   A0A345BF19   A0A0V0J280   A0A1Q1PP74   A0A0K8TUX6   H9A5R5   A0A223HDB0   A0A194QX34   A0A223HCY4   A0A2A4JCR5   A0A2W1BDU9   A0A140G9H3   A0A2K8GL77   A0A3Q8HEA9   A0A345BF26   A0A345BF17   A0A1B3B728   A0A386H9K5   A0A223HCY5   A0A437B2L0   A0A146JYY8   A0A0F7QIG2   A0A223HCX7   A0A0S1TQ33   A0A2H1VST4   A0A1W5LAS2   A0A0K8TUD4   A0A2D0WKS5   A0A0L7LLS6   A0A1W6L166   A0A0U3C6J1   A0A2P1JHG6   A0A1V1WBQ2   A0A2K8GL75   A0A223HDB5   A0A0S3J2Z8   A0A1Q1PP97   A0A0K8TUC6   A0A0B5A3J3   A0A310SDV6   A0A2D0WKS7   A0A0F7QIG0   A0A2A4IZW1   A0A1Q1PP98   A0A0C5DMP4   A0A0S3J2S5   A0A345BF14   E5FIB0   A0A212FEZ5   A0A223HDB2   A0A2H4ZBE9   H9A5R2   E2AM42   A0A232FN58   A0A067R2S3   A0A3L8E073   A0A0C9PTU2   A0A1S4GPY3   H9A5R6   A0A067QZN3   A0A182XCS1   A0A1B3P5G8   A0A1J0KL22   A0A2H1VRQ6   A0A182GF22   K7J111   A0A1B3P5F9  

Pubmed

28756777    25803580    26812239    21091811    27004525    29375398    + More
24998398    22118469    26354079    29727827    27006164    28150741    26017144    22363688    26227816    26657286    26626891    25665775    29133804    20798317    28648823    24845553    30249741    12364791    27538507    27836740    26483478    20075255   

EMBL

KZ150379    PZC71098.1    LC017791    BAR64805.1    KR912012    ALM24939.1    + More
HM562973    ADR64684.1    ODYU01003127    SOQ41495.1    PZC71097.1    KU702626    AMM70653.1    KY225533    ARO70545.1    LC017792    BAR64806.1    RSAL01000205    RVE44372.1    NWSH01003358    PCG66488.1    KF487730    AII01128.1    AGBW02009222    OWR51314.1    NWSH01001928    PCG69641.1    KQ459053    KPJ04095.1    MG820672    AXF48843.1    GDKB01000021    JAP38475.1    KY325454    AQM73615.1    GCVX01000137    JAI18093.1    JN836715    AFC91755.2    KY283703    AST36362.1    KQ461073    KPJ09520.1    KY283574    AST36234.1    PCG69639.1    PZC71096.1    KU702625    AMM70652.1    KY225534    ARO70546.1    MF625646    AXY83471.1    MG820679    AXF48850.1    MG820670    AXF48841.1    KT588085    AOE47995.1    MG546648    AYD42271.1    KY283575    AST36235.1    RSAL01000189    RVE44731.1    GEDO01000005    JAP88621.1    LC017794    BAR64808.1    KY283576    AST36236.1    KR912013    ALM24940.1    ODYU01004051    SOQ43532.1    KT991368    ANA75034.2    GCVX01000138    JAI18092.1    KY019179    ARB05668.1    JTDY01000633    KOB76402.1    KX609444    KB465935    ARN17851.1    RLZ02208.1    KP975110    ALT31629.1    MG766213    AVN97883.1    GENK01000124    JAV45789.1    KY225535    ARO70547.1    KY283704    AST36363.1    KT381535    ALR72541.1    KY325455    AQM73616.1    GCVX01000136    JAI18094.1    KJ542755    AJD81639.1    GGOB01000048    MCH29444.1    KY019178    ARB05667.1    LC017789    BAR64803.1    NWSH01004502    PCG65036.1    KY325456    AQM73617.1    KP296776    AJO62240.1    KT381531    ALR72537.1    MG820667    AXF48838.1    HM562974    ADR64685.1    AGBW02008878    OWR52312.1    KY283705    AST36364.1    MF975509    AUF73085.1    JN836712    AFC91752.1    GL440704    EFN65500.1    NNAY01000014    OXU31959.1    KK852952    KDR13328.1    QOIP01000002    RLU26111.1    GBYB01004753    JAG74520.1    AAAB01008960    JN836716    AFC91756.2    KK852854    KDR14986.1    KX655894    AOG12843.1    KX298831    APC94348.1    SOQ43533.1    JXUM01059078    JXUM01059079    JXUM01059080    JXUM01059081    JXUM01059082    KQ562034    KXJ76850.1    KX655899    AOG12848.1   

Proteomes

UP000283053    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000000311    UP000215335    UP000027135    UP000279307    UP000076407    UP000069940    UP000249989    UP000002358   

Pfam

PF00060   Lig_chan        + More
PF02824   TGS
PF03129   HGTP_anticodon
PF00587   tRNA-synt_2b
PF07973   tRNA_SAD
PF10613   Lig_chan-Glu_bd
PF00497   SBP_bac_3
PF00654   Voltage_CLC
PF00571   CBS

Interpro

IPR001320   Iontro_rcpt        + More
IPR013087   Znf_C2H2_type       
IPR002320   Thr-tRNA-ligase_IIa       
IPR002314   aa-tRNA-synt_IIb       
IPR036621   Anticodon-bd_dom_sf       
IPR012675   Beta-grasp_dom_sf       
IPR012947   tRNA_SAD       
IPR033728   ThrRS_core       
IPR012676   TGS-like       
IPR004154   Anticodon-bd       
IPR018163   Thr/Ala-tRNA-synth_IIc_edit       
IPR006195   aa-tRNA-synth_II       
IPR004095   TGS       
IPR019594   Glu/Gly-bd       
IPR001638   Solute-binding_3/MltF_N       
IPR000644   CBS_dom       
IPR001807   Cl-channel_volt-gated       
IPR014743   Cl-channel_core       

SUPFAM

SSF55186   SSF55186        + More
SSF81271   SSF81271       
SSF81340   SSF81340       

Gene 3D

3.10.20.30     3.40.50.800     1.10.3080.10    

CDD

cd00771  ThrRS_core

ProteinModelPortal

A0A2W1B5Q5   A0A0F7QEH8   A0A0S1TK20   E5FIA9   A0A2H1VKZ8   A0A2W1BCP8   + More
A0A140G9H4   A0A2K8GL81   A0A0F7QED4   A0A3S2LDH7   A0A2A4J494   A0A076E9E5   A0A212FC55   A0A2A4JCF7   A0A194QGN2   A0A345BF19   A0A0V0J280   A0A1Q1PP74   A0A0K8TUX6   H9A5R5   A0A223HDB0   A0A194QX34   A0A223HCY4   A0A2A4JCR5   A0A2W1BDU9   A0A140G9H3   A0A2K8GL77   A0A3Q8HEA9   A0A345BF26   A0A345BF17   A0A1B3B728   A0A386H9K5   A0A223HCY5   A0A437B2L0   A0A146JYY8   A0A0F7QIG2   A0A223HCX7   A0A0S1TQ33   A0A2H1VST4   A0A1W5LAS2   A0A0K8TUD4   A0A2D0WKS5   A0A0L7LLS6   A0A1W6L166   A0A0U3C6J1   A0A2P1JHG6   A0A1V1WBQ2   A0A2K8GL75   A0A223HDB5   A0A0S3J2Z8   A0A1Q1PP97   A0A0K8TUC6   A0A0B5A3J3   A0A310SDV6   A0A2D0WKS7   A0A0F7QIG0   A0A2A4IZW1   A0A1Q1PP98   A0A0C5DMP4   A0A0S3J2S5   A0A345BF14   E5FIB0   A0A212FEZ5   A0A223HDB2   A0A2H4ZBE9   H9A5R2   E2AM42   A0A232FN58   A0A067R2S3   A0A3L8E073   A0A0C9PTU2   A0A1S4GPY3   H9A5R6   A0A067QZN3   A0A182XCS1   A0A1B3P5G8   A0A1J0KL22   A0A2H1VRQ6   A0A182GF22   K7J111   A0A1B3P5F9  

KEGG

NA   

GO

GO:0004970   GO:0016021   GO:0003676   GO:0006435   GO:0004829   GO:0005737   GO:0005524   GO:0016020   GO:0005247  

PANTHER

PTHR11451  

Subcellular location

Membrane  

SignalP

Position:   1 - 18,         Likelihood:  0.957716

 

 

Length:

278

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01568

Exp number, first 60 AAs:

0.01146

Total prob of N-in:

0.01894

outside

1  -  278

 

 

Pi

225.273353

Theta

142.956258

Tajima's D

1.826202

CLR

0

CSRT

0.857607119644018

Interpretation

Uncertain