Gene

KWMTBOMO11323

Pre Gene Modal

BGIBMGA001981

Annotation

PREDICTED:_zinc_finger_SWIM_domain-containing_protein_4-like_[Papilio_xuthus]

Location

Bomo_Chr19(-):3211782-3219500      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.844 Mitochondrial   Reliability : 1.189

CDS

ATGGTCCAGTTTTCTCTTCGGCTGGTTGGTTGGTCTGTCCAGGTTGGTCACGACGGTTTCCATCTAAGTGGGGTGGTGCGGGCACCGGCGGCAGTTCCTCCCTGCTCAGAACCGGAACGGCTGTTCAGGGTCACAGTTTCTTTTGACAGGTGTAAGATAACCGGTGTGACATGCAGCTGCGAGGCGCGAGATATCTTTTGGTGCCAACATGTGGTCGCATTGGCCTTGTACCGGATCAGGAACGCAGACTCCGTTCGGTTACGAGTGCCTATATCAGAAACACTCCTGCAAATGGACAGACAGCAACTTCAGAAGTTCGTCCAGTATTTAATATCGGAGCACCACACCGAAGTGTTGCCGACGGCGCAGAGGTTAGCCGACGAAGTTCTGCAGGCGAGGTCTGCCATCAACAGGATATGTGGCGCGCCGGACCCGACGGCCGGACCGCCGCCCGACGCGCACCATGCCTGGCATTTGGATGAGCAGCAGGTCTGCGAACAAGTACGCGCGTATTTGTTACAGGGAACTTATTATAATGCAAACAAACAATTGAACTCTTTATTTTCAAAGGTTCGGGAGATGCTCCGCGCGCAAGACTCGAACGGTCCCAGGATGCTCATGCTCATGACGGAGCAGTTCCTATCTGACCCCCGGCTCCTGCTATGGAGGAATCAGAACACGCCCATGACAGAGAAATGCAGGCAGCTGTGGGAGCAGTTAGGAGCTCTGTGGGTCAGCATAGTCTTAGATCCTGGAAGTAATAAGCACCATCGGCTGCAGTGGAGGCATCTGCTGGAGAAGTGGTCGGCAGTTGAAGTATGTCCCACCGAGGATCCAGACTATAGGTCTTTTCCTTTAGTAAGTAAACCTGAAGTTATTTATAATGTAATCATTTAA

Protein

MVQFSLRLVGWSVQVGHDGFHLSGVVRAPAAVPPCSEPERLFRVTVSFDRCKITGVTCSCEARDIFWCQHVVALALYRIRNADSVRLRVPISETLLQMDRQQLQKFVQYLISEHHTEVLPTAQRLADEVLQARSAINRICGAPDPTAGPPPDAHHAWHLDEQQVCEQVRAYLLQGTYYNANKQLNSLFSKVREMLRAQDSNGPRMLMLMTEQFLSDPRLLLWRNQNTPMTEKCRQLWEQLGALWVSIVLDPGSNKHHRLQWRHLLEKWSAVEVCPTEDPDYRSFPLVSKPEVIYNVII

Uniprot

A0A2A4JM88   A0A2H1W1I7   A0A194QVG4   A0A2W1BKZ6   A0A194QKW0   A0A1Y1K3Y3   + More
A0A1Y1JYD8   A0A1Y1K6B5   A0A1Y1K4S6   A0A1B6C4Y9   A0A0A9WW41   E9GW92   T1IH18   E0VSB1   A0A1B6I957   A0A0P5IQ67   A0A0P5BLP8   A0A0P5NIU0   A0A2S2NSZ9   A0A182SR03   A0A1B6KGE9   A0A0P5TUV1   A0A2S2QT44   A0A0N7ZV03   A0A0P6AF55   A0A0P5KEL1   A0A0P4Z4U2   A0A0P5SNY2   A0A182PVQ2   A0A0P5TGU7   A0A0P5L6L5   A0A0P6I2K5   A0A182MJ46   A0A182Y630   A0A2S2N8H5   A0A182HR18   J9JYZ1   A0A2H8TGU8   A0A182XH96   A0A182JSM1   A0A182W8I3   A0A147BM03   A0A182R1Q8   A0A182ISZ1   A0A182Q0P5   A0A182NNS9   A0A182FN41   A0A0P6CUS6   A0A182GBV0   A0A182HA79   A0A1S4FS60   Q7PMD9   A0A1Q3G3Z1   A0A0P5DFL0   A0A3Q0J8M3   A0A164N7M9   A0A084W3Z3   A0A1L8DB63   B0X7A4   Q16R38   A0A2M4CMS9   W5JDT1   A0A1S3JKI8   A0A1J1I2D1   A0A0L8GS87   A0A1S3JL69   R7U4D9   V4B3Z7   A0A2T7NNE5   A0A093KHH6   W4YQ80   A0A091CTI0   W5M506   W5M526   A0A1W4ZYS2   A0A091HB06   A0A1V9XFT4   A0A1A8GK33   I3M837   A0A1A8NWJ6   A0A3Q0GSW9   F1S366   A0A151PG48   A0A2U3Z3I7   G1ND56   F7ALU9   A0A091PEM3   A0A3L7I496   G1NWW0   A0A3B3SFJ3   A0A1A8EX18   A0A210R0K5   L8IM78   A0A091KBC3   A0A093CIQ4   A0A3Q3XKR1   A0A091WV42   A0A1A8VAX6   A0A093Q4I1  

Pubmed

26354079    28756777    28004739    25401762    26823975    21292972    + More
20566863    25244985    29652888    26483478    12364791    24438588    17510324    20920257    23761445    23254933    28327890    22293439    20838655    18464734    29704459    21993624    29240929    28812685    22751099   

EMBL

NWSH01001016    PCG73101.1    ODYU01005752    SOQ46928.1    KQ461073    KPJ09528.1    + More
KZ150054    PZC74345.1    KQ459053    KPJ04086.1    GEZM01097029    GEZM01097026    JAV54335.1    GEZM01097030    GEZM01097024    JAV54334.1    GEZM01097027    GEZM01097025    JAV54337.1    GEZM01097028    JAV54336.1    GEDC01028844    JAS08454.1    GBHO01030927    GDHC01012941    JAG12677.1    JAQ05688.1    GL732569    EFX76311.1    JH429682    DS235748    EEB16267.1    GECU01024306    JAS83400.1    GDIQ01218337    JAK33388.1    GDIP01183463    JAJ39939.1    GDIQ01148565    JAL03161.1    GGMR01007579    MBY20198.1    GEBQ01029464    JAT10513.1    GDIP01121318    JAL82396.1    GGMS01011743    MBY80946.1    GDIP01209913    JAJ13489.1    GDIP01030492    JAM73223.1    GDIQ01185289    JAK66436.1    GDIP01220517    JAJ02885.1    GDIP01161314    GDIP01137373    JAL66341.1    GDIP01130073    JAL73641.1    GDIQ01173989    JAK77736.1    GDIQ01010502    JAN84235.1    AXCM01000301    GGMR01000457    MBY13076.1    APCN01001632    ABLF02037777    ABLF02037780    ABLF02037783    GFXV01001541    MBW13346.1    GEGO01003591    JAR91813.1    AXCN02001980    GDIQ01087073    JAN07664.1    JXUM01053346    JXUM01053347    KQ561772    KXJ77593.1    JXUM01122192    KQ566577    KXJ70009.1    AAAB01008980    EAA13961.5    GFDL01000531    JAV34514.1    GDIP01157122    JAJ66280.1    LRGB01002864    KZS05713.1    ATLV01020235    ATLV01020236    ATLV01020237    KE525296    KFB44937.1    GFDF01010477    JAV03607.1    DS232445    EDS41857.1    CH477725    EAT36872.2    GGFL01002323    MBW66501.1    ADMH02001511    ETN62246.1    CVRI01000038    CRK94437.1    KQ420562    KOF79931.1    AMQN01009492    AMQN01009493    KB305537    ELU00951.1    KB199650    ESP05158.1    PZQS01000010    PVD22688.1    KK586382    KFV97280.1    AAGJ04162583    AAGJ04162584    AAGJ04162585    KN124514    KFO20870.1    AHAT01018219    KL505212    KFO84608.1    MNPL01012160    OQR72271.1    HAEC01003304    SBQ71381.1    AGTP01008710    AGTP01008711    AGTP01008712    AGTP01008713    AGTP01008714    AGTP01008715    AGTP01008716    AGTP01008717    AGTP01008718    AGTP01008719    HAEI01000751    SBR73137.1    AEMK02000049    AKHW03000266    KYO47990.1    KK671922    KFQ05673.1    RAZU01000100    RLQ73034.1    AAPE02035676    HAEB01004880    SBQ51407.1    NEDP02001046    OWF54411.1    JH880979    ELR57451.1    KK550496    KFP33641.1    KL462976    KFV14353.1    KK734231    KFR05301.1    HAEJ01016549    SBS57006.1    KL671111    KFW81350.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000000305    UP000009046    UP000075901    + More
UP000075885    UP000075883    UP000076408    UP000075840    UP000007819    UP000076407    UP000075881    UP000075920    UP000075900    UP000075880    UP000075886    UP000075884    UP000069272    UP000069940    UP000249989    UP000007062    UP000079169    UP000076858    UP000030765    UP000002320    UP000008820    UP000000673    UP000085678    UP000183832    UP000053454    UP000014760    UP000030746    UP000245119    UP000007110    UP000028990    UP000018468    UP000192224    UP000192247    UP000005215    UP000189705    UP000008227    UP000050525    UP000245341    UP000001645    UP000002279    UP000273346    UP000001074    UP000261540    UP000242188    UP000261620    UP000053605    UP000053258   

PRIDE

F1S366   

Pfam

PF07679   I-set        + More
PF01391   Collagen
PF02191   OLF

Interpro

IPR007527   Znf_SWIM        + More
IPR008160   Collagen       
IPR003112   Olfac-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2A4JM88   A0A2H1W1I7   A0A194QVG4   A0A2W1BKZ6   A0A194QKW0   A0A1Y1K3Y3   + More
A0A1Y1JYD8   A0A1Y1K6B5   A0A1Y1K4S6   A0A1B6C4Y9   A0A0A9WW41   E9GW92   T1IH18   E0VSB1   A0A1B6I957   A0A0P5IQ67   A0A0P5BLP8   A0A0P5NIU0   A0A2S2NSZ9   A0A182SR03   A0A1B6KGE9   A0A0P5TUV1   A0A2S2QT44   A0A0N7ZV03   A0A0P6AF55   A0A0P5KEL1   A0A0P4Z4U2   A0A0P5SNY2   A0A182PVQ2   A0A0P5TGU7   A0A0P5L6L5   A0A0P6I2K5   A0A182MJ46   A0A182Y630   A0A2S2N8H5   A0A182HR18   J9JYZ1   A0A2H8TGU8   A0A182XH96   A0A182JSM1   A0A182W8I3   A0A147BM03   A0A182R1Q8   A0A182ISZ1   A0A182Q0P5   A0A182NNS9   A0A182FN41   A0A0P6CUS6   A0A182GBV0   A0A182HA79   A0A1S4FS60   Q7PMD9   A0A1Q3G3Z1   A0A0P5DFL0   A0A3Q0J8M3   A0A164N7M9   A0A084W3Z3   A0A1L8DB63   B0X7A4   Q16R38   A0A2M4CMS9   W5JDT1   A0A1S3JKI8   A0A1J1I2D1   A0A0L8GS87   A0A1S3JL69   R7U4D9   V4B3Z7   A0A2T7NNE5   A0A093KHH6   W4YQ80   A0A091CTI0   W5M506   W5M526   A0A1W4ZYS2   A0A091HB06   A0A1V9XFT4   A0A1A8GK33   I3M837   A0A1A8NWJ6   A0A3Q0GSW9   F1S366   A0A151PG48   A0A2U3Z3I7   G1ND56   F7ALU9   A0A091PEM3   A0A3L7I496   G1NWW0   A0A3B3SFJ3   A0A1A8EX18   A0A210R0K5   L8IM78   A0A091KBC3   A0A093CIQ4   A0A3Q3XKR1   A0A091WV42   A0A1A8VAX6   A0A093Q4I1  

KEGG

105842591    no KO assigned | (RefSeq) zinc finger SWIM domain-containing protein 6-like

GO

GO:0008270   GO:0016021   GO:1902667   GO:0031462   GO:0006516   GO:0005515   GO:0042555   GO:0006260   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

298

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00146

Exp number, first 60 AAs:

0.00038

Total prob of N-in:

0.00746

outside

1  -  298

 

 

Pi

189.146312

Theta

145.544425

Tajima's D

1.088217

CLR

0.238055

CSRT

0.682965851707415

Interpretation

Uncertain