Gene

KWMTBOMO11318  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001984

Annotation

PREDICTED:_putative_deoxyribonuclease_TATDN1_[Plutella_xylostella]

Location

Bomo_Chr19(-):3145753-3147270      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.81

CDS

ATGAGTGCGTTAAGAAAATATATAGACATTGGTGCTAACCTAACAGATGATATGTATAAAGGAGAATATAATGGGTCTAGAAAACATGATCCAGATTTGGACGTGGTACTAGAGAGAGCTTGGACTAGTGGCATCAACAAAATTATTGTTACTGGAGGGAGTCTTGAAGACAGTAAAAAAGCAATCGAGCTGTCTAGGACAGATTCTAAGCTATTCACAACTGTGGGATGTCATCCAACCAGGTGCAGTGAGTTTCTATCCAATCCTGATGACTACCTACAAGGACTGCGAGATCTCATATCAGGAAACAAGGACAAAGTTGTGGCTATAGGAGAGTGTGGACTAGATTATGAAAGGTTTCACTTTTGTGAGAAGGAAGTGCAACTAAAGTAG

Protein

MSALRKYIDIGANLTDDMYKGEYNGSRKHDPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELSRTDSKLFTTVGCHPTRCSEFLSNPDDYLQGLRDLISGNKDKVVAIGECGLDYERFHFCEKEVQLK

Uniprot

H9IXK1   A0A2W1BRH2   A0A194QGL7   A0A2H1VER8   A0A3S2NNI6   A0A2A3EQZ1   + More
A0A087ZUX7   A0A154PP52   A0A158NNV7   A0A2J7PI09   A0A3L8DN63   S4PV16   R4WJX6   A0A1B6I729   A0A1B6ILS4   A0A151IC92   E2A8B2   A0A1B6KU28   A0A1W4XHM8   A0A151IWT8   J3JXH3   N6SRK1   U4U2X9   A0A212F099   A0A1B6JIE8   A0A2R7VPJ1   A0A1Y1LYK0   A0A151WJT5   A0A1B6FIY3   A0A0L7RAN1   A0A2P8Z375   A0A182YKU1   A0A182RDL3   B4KQJ9   A0A1B0C7X8   A0A1A9YGJ7   B3MGQ9   A0A182WLL5   A0A1B6CB08   A0A195BTN0   A0A1I8MXX4   A0A182SLY9   D6WQZ9   A0A1I8P2V7   A0A182KNX4   B4ME40   A0A0M8ZUG0   A0A0L8FYA4   D3TS77   A0A0L8FYI5   A0A182I1B7   A0A182TUJ7   A0A1Q3FIY5   A0A074ZAQ7   A0A182VMP7   Q7Q5W8   A0A182XPB1   H2KUU8   B4MJS8   W5JQZ7   B0XK00   A0A1S8WHN6   A0A0K8WBY6   W8C986   A0A182NK26   A0A1S3IPA1   B4QDS5   A0A232EV92   C9QP59   A0A0J9R6Y5   A0A084WEP0   A0A2H1BSP3   A0A3B0JI32   B4P1A5   A0A146M136   A0A182IVP1   A0A0K8W9G7   A0A0P4WG58   B7Q017   A0A034WR03   A0A034WS82   A0A182GUK2   A0A0T6B6F6   B4HQD8   A0A1W4V1P6   A0A0A9ZF80   A0A0L0BTX4   B3NAL1   A0A182QNR9   Q16EQ7   A0A182FH51   A0A2H8TGL3   A0A2S2Q6F1   T1ILX7   T2MBU4   C4WSN5   A0A226ETW2   A0A2M4BU96   A0A1A9W9K8   A0A3Q1JW70  

Pubmed

19121390    28756777    26354079    21347285    30249741    23622113    + More
23691247    20798317    22516182    23537049    22118469    28004739    29403074    25244985    17994087    25315136    18362917    19820115    20966253    20353571    12364791    14747013    17210077    22023798    20920257    23761445    24495485    28648823    22936249    24438588    17550304    26823975    25348373    26483478    25401762    26108605    17510324    24065732   

EMBL

BABH01018278    KZ150054    PZC74353.1    KQ459053    KPJ04080.1    ODYU01002171    + More
SOQ39325.1    RSAL01000205    RVE44359.1    KZ288193    PBC34185.1    KQ435007    KZC13649.1    ADTU01021806    NEVH01025130    PNF15958.1    QOIP01000006    RLU21874.1    GAIX01009323    JAA83237.1    AK417920    BAN21135.1    GECU01025003    JAS82703.1    GECU01019818    JAS87888.1    KQ978062    KYM97707.1    GL437526    EFN70325.1    GEBQ01025022    JAT14955.1    KQ980843    KYN12296.1    BT127942    AEE62904.1    APGK01059415    KB741293    ENN70244.1    KB632046    ERL88254.1    AGBW02011140    OWR47152.1    GECU01008824    JAS98882.1    KK854011    PTY09286.1    GEZM01043889    JAV78684.1    KQ983031    KYQ48122.1    GECZ01019607    JAS50162.1    KQ414618    KOC67816.1    PYGN01000217    PSN50956.1    CH933808    EDW08168.2    JXJN01007873    CH902619    EDV36817.2    GEDC01026823    JAS10475.1    KQ976417    KYM89779.1    KQ971351    EFA06484.1    CH940662    EDW58805.2    KQ435845    KOX71197.1    KQ425220    KOF69732.1    EZ424279    ADD20555.1    KOF69733.1    APCN01000049    GFDL01007560    JAV27485.1    KL596820    KER24173.1    AAAB01008960    EAA11869.4    DF144198    GAA36407.2    CH963846    EDW72367.2    ADMH02000687    ETN65325.1    DS233663    EDS31031.1    KV906970    OON13970.1    GDHF01003717    JAI48597.1    GAMC01002379    JAC04177.1    CM000362    EDX05937.1    NNAY01002039    OXU22255.1    BT099941    ACX36517.1    CM002911    KMY91853.1    ATLV01023241    KE525341    KFB48684.1    KZ437690    PIS78237.1    OUUW01000001    SPP73059.1    CM000157    EDW89107.1    GDHC01006053    JAQ12576.1    GDHF01005295    GDHF01004630    JAI47019.1    JAI47684.1    GDRN01074423    JAI63246.1    ABJB010491580    ABJB010503714    DS829427    EEC12189.1    GAKP01002332    JAC56620.1    GAKP01002334    JAC56618.1    JXUM01089369    JXUM01089370    JXUM01089371    JXUM01089372    JXUM01089373    KQ563765    KXJ73348.1    LJIG01009561    KRT82833.1    CH480816    EDW46677.1    GBHO01001526    JAG42078.1    JRES01001351    KNC23461.1    CH954177    EDV59765.2    AXCN02000497    CH478615    EAT32717.1    GFXV01001429    MBW13234.1    GGMS01003977    MBY73180.1    JH430921    HAAD01003190    CDG69422.1    ABLF02033862    AK340264    BAH70905.1    LNIX01000002    OXA61055.1    GGFJ01007515    MBW56656.1   

Proteomes

UP000005204    UP000053268    UP000283053    UP000242457    UP000005203    UP000076502    + More
UP000005205    UP000235965    UP000279307    UP000078542    UP000000311    UP000192223    UP000078492    UP000019118    UP000030742    UP000007151    UP000075809    UP000053825    UP000245037    UP000076408    UP000075900    UP000009192    UP000092460    UP000092443    UP000007801    UP000075920    UP000078540    UP000095301    UP000075901    UP000007266    UP000095300    UP000075882    UP000008792    UP000053105    UP000053454    UP000075840    UP000075902    UP000075903    UP000007062    UP000076407    UP000007798    UP000000673    UP000002320    UP000075884    UP000085678    UP000000304    UP000215335    UP000030765    UP000268350    UP000002282    UP000075880    UP000001555    UP000069940    UP000249989    UP000001292    UP000192221    UP000037069    UP000008711    UP000075886    UP000008820    UP000069272    UP000007819    UP000198287    UP000091820    UP000265040   

PRIDE

H9IXK1   

Pfam

PF01026   TatD_DNase        + More
PF05485   THAP

Interpro

IPR018228   DNase_TatD-rel_CS        + More
IPR032466   Metal_Hydrolase       
IPR001130   TatD_family       
IPR006612   THAP_Znf       
IPR038441   THAP_Znf_sf       

SUPFAM

SSF51556   SSF51556       

Gene 3D

3.30.40.180    

CDD

cd01310  TatD_DNAse

ProteinModelPortal

H9IXK1   A0A2W1BRH2   A0A194QGL7   A0A2H1VER8   A0A3S2NNI6   A0A2A3EQZ1   + More
A0A087ZUX7   A0A154PP52   A0A158NNV7   A0A2J7PI09   A0A3L8DN63   S4PV16   R4WJX6   A0A1B6I729   A0A1B6ILS4   A0A151IC92   E2A8B2   A0A1B6KU28   A0A1W4XHM8   A0A151IWT8   J3JXH3   N6SRK1   U4U2X9   A0A212F099   A0A1B6JIE8   A0A2R7VPJ1   A0A1Y1LYK0   A0A151WJT5   A0A1B6FIY3   A0A0L7RAN1   A0A2P8Z375   A0A182YKU1   A0A182RDL3   B4KQJ9   A0A1B0C7X8   A0A1A9YGJ7   B3MGQ9   A0A182WLL5   A0A1B6CB08   A0A195BTN0   A0A1I8MXX4   A0A182SLY9   D6WQZ9   A0A1I8P2V7   A0A182KNX4   B4ME40   A0A0M8ZUG0   A0A0L8FYA4   D3TS77   A0A0L8FYI5   A0A182I1B7   A0A182TUJ7   A0A1Q3FIY5   A0A074ZAQ7   A0A182VMP7   Q7Q5W8   A0A182XPB1   H2KUU8   B4MJS8   W5JQZ7   B0XK00   A0A1S8WHN6   A0A0K8WBY6   W8C986   A0A182NK26   A0A1S3IPA1   B4QDS5   A0A232EV92   C9QP59   A0A0J9R6Y5   A0A084WEP0   A0A2H1BSP3   A0A3B0JI32   B4P1A5   A0A146M136   A0A182IVP1   A0A0K8W9G7   A0A0P4WG58   B7Q017   A0A034WR03   A0A034WS82   A0A182GUK2   A0A0T6B6F6   B4HQD8   A0A1W4V1P6   A0A0A9ZF80   A0A0L0BTX4   B3NAL1   A0A182QNR9   Q16EQ7   A0A182FH51   A0A2H8TGL3   A0A2S2Q6F1   T1ILX7   T2MBU4   C4WSN5   A0A226ETW2   A0A2M4BU96   A0A1A9W9K8   A0A3Q1JW70  

PDB

2XIO     E-value=1.00602e-36,     Score=378

KEGG

101742036    K03424 TatD DNase family protein [EC:3.1.21.-] | (RefSeq) putative deoxyribonuclease TATDN1

GO

GO:0016888   GO:0016788   GO:0008296   GO:0003677   GO:0003676   GO:0008270   GO:0005515   GO:0042555   GO:0006260   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

130

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00041

Exp number, first 60 AAs:

0.00041

Total prob of N-in:

0.29503

outside

1  -  130

 

 

Pi

128.582497

Theta

76.275679

Tajima's D

1.612344

CLR

0

CSRT

0.806509674516274

Interpretation

Uncertain