SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11316  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001842
Annotation
Transmembrane_protein_214_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.042 Mitochondrial   Reliability : 1.253 Nuclear   Reliability : 1.541
 

Sequence

CDS
ATGTCTAGCGGTCAATGGGAAGTCGTAGGTAAAAATAAGAAGTCTCAGAACGGAAAGTTAAAATCCAAGGAGGATGAGAAAAAAGCTTTGAAAAATGGACCTAAACTTGAGGACGTCGTTCCTCATTCTCAAATTAAATCATTATACGCAGGAATGGATGTTGATGGCGAAAAAAAATCGGCGAAAGAGAAAAAAAACAGTGACAAGAAAGGAAAAAAACAAGAGAAGAAAGTTGAACCGCCCAAACCAAAAATCCCTAAAACCATTGAAGGTGCTCTAGAAGCCATTGACGTAACCGAGCTGGCCAGTATCATTACATCGAATAAGGTACGCTTCTCAAATGCGCCCTTAGTCTGGCTTAAGGAAGTCGCAAACTTTTTGAACAGCAAAATTCCAATTGAAGTTGAAGATCCAACTTTTACAATCTATCCTGCAACATACCCTCTATCTGAAACACCAGATGAGCTGAAGAGAACACTTTCAAGTGTTCTTCAAGATGCTGGAAAGGCAAATGTGCAGTTATTCTTTGATGGCACTCTTACAGCTCTTGCCAATGACTTGAGTAGAGGTCTACATGCCAATGGTCACAGATTACTGCTTCAGATGCTAGCTCAAGATAACCCCGAGTTTTGTATTGCATCCCTCCAGAAGTATGGAAGTTTAAGAAACTCGTACCAGAATCGACCCCCTATAGGAATGTCTCTACTGTGGGCATTTGGACAAGGTGGTCTGAAAGACTTCACGGTGGGATTGAAAGTTTGGCAGGAAATCTTTTTACCGGTACTCGAATTGAAGAACTATACGAAATACGTAATAGGATATCTTTCGAAGATAATCGATCATCATTCCGAGATGAATACGATTAATGTTAACCAGGATCAATTCTTTTCTATGATTGACTTGATAAACACAAAGAAGAATGGTTTATCGAAGGAATTTTCTGGTGACCTAATCAAACAATTAAGTAAATATAAGGACATTTATTTCAAGAAGAGCGGCAACAAATTACAAGTTACGTTCAATCAGCTGATGAAGAAACTCCCCAACCAGTACCTAAGCGGTTCGGCCTTGGATCCGTACAACAAAGTGATCATCGAAAGTCTAGTCGACTGTCTGTCTAAAGACGACTCTTGTAACGCCACGTGGCGTCAACTCTTCCACAGGTGCAGTAAGCAGTCTGCCTCACTCCTCGATTTCATAGATTCAAATTGGTTGGAAGTAAGTAAAAAATTGAAATTAAAATCTCTAAAAGCAACGGTGCTACAATATAAAGAAGTGAGCGGAGAAGCTCTTAAGGGCAAGAAAAAGGATGAAGTTCTAGTAAAAACAACGAAGATATGCCAGGATATTCTAGACAGAATGACGAGCACTAGAAGAAATCCCTGGTTGTGGGCCAGCTTTGTTCTGCTGGTCAGCATTGCTGGTCTGGTAGCTTATGACGTGTCTCGGGCTGGAGGAAACTTCCCTAAGAGTACAACGGGAAAGCTGTTCAAAGATTTGGGCATTCTTGAGCATAGTCAACAGGCTTGGCAGAAGACACTGTCCACCTCTGCTCGCGGTTACCTATGGCTTGAAACCAATGCACCGGTTTACTACGCACAAACTGTTGAAATATGTCGTCCATATACACAACTGTCTAAGGACGCATTCTTCATAGCATTAAAGAAAGCTGGTATTCTGTATGGAAATGTCCAAGACTATGTGGTGGAGAAAACGCCTGTCGTTATTAAAACCATTGAAGAGTATGCTCCTGGTCTTGTAGACAACGTTCAGAGCTATGCATCTACGGCCTGGAGCGGACTCAAAAAGTACTCTAGTGACTATTATCAAATCACAACTGACTATTTGGTTACTAAAGTTTTTGTTGGTGATTGGGCCCCAGAGGTACTTCAGAATAAAACGCAGTCGGCTCTGAATATGACAAAGTCCCAAGTTTCATCATATTATGTATGGTTCCGGCAACAGGTTCACATATACTCAGAGATACCTTGA
Protein
MSSGQWEVVGKNKKSQNGKLKSKEDEKKALKNGPKLEDVVPHSQIKSLYAGMDVDGEKKSAKEKKNSDKKGKKQEKKVEPPKPKIPKTIEGALEAIDVTELASIITSNKVRFSNAPLVWLKEVANFLNSKIPIEVEDPTFTIYPATYPLSETPDELKRTLSSVLQDAGKANVQLFFDGTLTALANDLSRGLHANGHRLLLQMLAQDNPEFCIASLQKYGSLRNSYQNRPPIGMSLLWAFGQGGLKDFTVGLKVWQEIFLPVLELKNYTKYVIGYLSKIIDHHSEMNTINVNQDQFFSMIDLINTKKNGLSKEFSGDLIKQLSKYKDIYFKKSGNKLQVTFNQLMKKLPNQYLSGSALDPYNKVIIESLVDCLSKDDSCNATWRQLFHRCSKQSASLLDFIDSNWLEVSKKLKLKSLKATVLQYKEVSGEALKGKKKDEVLVKTTKICQDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDVSRAGGNFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKAGILYGNVQDYVVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLQNKTQSALNMTKSQVSSYYVWFRQQVHIYSEIP

Summary

EMBL
BABH01018278    ODYU01002171    SOQ39324.1    KQ459053    KPJ04079.1    KQ461073    + More
KPJ09533.1    AGBW02011140    OWR47153.1    NWSH01002431    PCG68314.1    GAIX01004886    JAA87674.1    JTDY01005773    KOB66647.1    NEVH01025130    PNF15977.1    KK852779    KDR16686.1    GEDC01029922    JAS07376.1    GEZM01009887    JAV94246.1    GFDL01001325    JAV33720.1    GEDC01004686    JAS32612.1    GL437526    EFN70324.1    KZ288193    PBC34186.1    GL763196    EFZ20030.1    KQ976417    KYM89778.1    ADTU01021806    FX986055    BBF98012.1    KQ980843    KYN12297.1    GL888384    EGI61868.1    KQ981953    KYN32449.1    KQ762207    OAD56057.1    LBMM01001920    KMQ95538.1    KQ435845    KOX71196.1    KQ983031    KYQ48123.1    GL451531    EFN79101.1    CH477204    EAT47954.1    GEBQ01029511    JAT10466.1    GECZ01010777    JAS58992.1    KQ978062    KYM97706.1    GFDL01001341    JAV33704.1    KQ414618    KOC67817.1    GECU01020071    JAS87635.1    GFDF01009985    JAV04099.1    GFDF01009986    JAV04098.1    AJWK01016603    KQ971351    EFA06531.2    GFDF01010244    JAV03840.1    KK107128    QOIP01000006    EZA58370.1    RLU21875.1    KYB26829.1    AAAB01008980    EAA14245.5    APCN01001735    GBXI01006423    JAD07869.1    GAKP01011917    JAC47035.1    GBYB01007731    JAG77498.1    GAMC01007710    JAB98845.1    CP012523    ALC38704.1    CH940661    EDW71244.2    NNAY01002039    OXU22256.1    JRES01000536    KNC30351.1    CH954177    EDV58953.1    CH480818    EDW52528.1    CM002910    KMY89652.1    CM000157    EDW88018.1    NCKU01001492    RWS11991.1    OUUW01000006    SPP81724.1    AE014134    BT003656    AAF53037.2    AAO39660.1    CH933807    EDW11421.1    CH479180    EDW28302.1    CH902620    EDV32443.1    CH475442    EAL29396.2    AJWK01004026    AJWK01004027    AJWK01004028    AJWK01004029    AAWZ02030759    GBEW01001090    JAI09275.1    AFYH01030204    AFYH01030205    AFYH01030206    AFYH01030207    AFYH01030208    AFYH01030209    RJVU01035944    ROL47233.1    KB537686    EMP32980.1    CP026262    AWP20331.1    GBSH01002850    JAG66177.1    AERX01015145   
Pfam
PF10151   TMEM214
Interpro
IPR019308   TMEM214        + More
IPR016024   ARM-type_fold       
SUPFAM
SSF48371   SSF48371       

Ontologies

Topology

Length:
663
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.11726999999998
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12427
outside
1  -  663
 
 

Population Genetic Test Statistics

Pi
254.110028
Theta
185.456829
Tajima's D
1.157303
CLR
0.289748
CSRT
0.699765011749413
Interpretation
Uncertain
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