Gene

KWMTBOMO11309

Pre Gene Modal

BGIBMGA001987

Annotation

hypothetical_protein_KGM_11096_[Danaus_plexippus]

Location

Bomo_Chr19(-):2832595-2837564      View in EpiBrowser

Full name

Transient receptor potential cation channel trpm      

Alternative Name

Transient receptor potential cation channel, subfamily M ortholog

Location in the cell

Mitochondrial   Reliability : 2.38

CDS

ATGATGCATCTCGTCTTCCCCAGGTGCTGGTGCGGCCTTAGCAGAACAGCTCATGGCGCCAACATCGTCACCGCTAACCCTGGAGAGGCGTGGGTACCAGCCCGGCACACGCAAGCCGGCCCTACGGACGCTTACGGGACAGTCGAGTTTCAGGGCGGACCACATCCAACTAAAGCCCAGTACGTGCGGCTATCTCACGACACCAGGCCTGAGTTAATAGTCCAGCTTTTGACCAGAGAGTGGGCTCTGGACAGGCCAAAACTCCTCATCACTATACAAGGAGGCAAAGCAAACTTCGATCTACAGCCCAAACTCAAGAAAGTGCTCAGAAAAGGTCTGCTCAAAGCCGCTAAAACAACCGGGGCGTGGATATTCACCGGCGGCACTAATACGGGTGTGACCCGTCAAGTTGGAGACGCGTTGCAGTTAGAGAGATCCCAGCGGGCAGGTCGAGTGGTCAGCATCGGAATAGCGCCGTGGGGTATCGTCGAGGGGGCCAACGAGCTCATCGGGAAAGGGCGAGATGTGCCTTACCACGCTATCGCTTCTCCCAGGATTTCCGGCTTTGGAATGAGCTCCCCTCCACGTTGTTTTCCGAGCGCTATGACATGTCCTTCTTCAAACGAGGCTTGTGGAGAGTACTTTATGGTAGGCAGCGGCTTGGCTCTGCCCCTGGCATTGCTGACGTCCATGAGCGACGGTGACCACTTACCATCAGGTGGGCCGTATGCTCGTCTGCCTTAA

Protein

MMHLVFPRCWCGLSRTAHGANIVTANPGEAWVPARHTQAGPTDAYGTVEFQGGPHPTKAQYVRLSHDTRPELIVQLLTREWALDRPKLLITIQGGKANFDLQPKLKKVLRKGLLKAAKTTGAWIFTGGTNTGVTRQVGDALQLERSQRAGRVVSIGIAPWGIVEGANELIGKGRDVPYHAIASPRISGFGMSSPPRCFPSAMTCPSSNEACGEYFMVGSGLALPLALLTSMSDGDHLPSGGPYARLP

Description

Calcium channel mediating constitutive calcium ion entry.

Similarity

Belongs to the transient receptor (TC 1.A.4) family. LTrpC subfamily.

Keywords

Alternative splicing   Complete proteome   Ion channel   Ion transport   Membrane   Phosphoprotein   Reference proteome   RNA editing   Transmembrane   Transmembrane helix   Transport  

Feature

chain  Transient receptor potential cation channel trpm
splice variant  In isoform B, isoform C and isoform D.

Uniprot

H9IXK4   A0A2H1X0Q7   A0A212FKT9   A0A3S2P3F4   A0A194R122   A0A2J7QQB7   + More
T1HST8   A0A1B6E5Z4   A0A1B6CHW9   A0A023F3Y9   A0A384T281   A0A034V3S7   A0A034V838   A0A146L203   A0A0A9Y3T5   A0A0A9YDY3   A0A182UK91   E0VAW3   W5J248   A0A2H8TK17   B0X5J8   A0A2S2PJE0   A0A067R873   W4VRK0   A0A2S2Q1B3   A0A182RUF7   A0A1L8DKF9   A0A182X2A2   A0A2S2NII2   A0A1Y1MC38   A0A1Y1MEE7   B3MEV7   X1XTV0   A0A2M3Z0A8   A0A2H8TVJ6   A0A139WEV5   A0A336KEI0   A0A1A9XFE3   A0A336L3N5   A0A0A1XCB9   D6WQJ1   A0A1I8M2P5   A0A1I8M2P8   A0A1I8M2Q0   A0A1I8M2P7   A0A1I8M2P6   A0A1I8M2Q1   A0A1I8M2Q2   A0A1I8M2P9   A0A0K8UMW6   A0A1I8M2Q3   A0A1A9WWI0   A0A0A1WNF2   A0A0K8W6A0   A0A0K8WAM8   A0A0K8VUR6   W8AKE0   W8AZI2   J9JY68   A0A0Q9WAX8   A0A182WB94   A0A182IJN8   A0A182Y860   B4J9S1   A0A0Q9XIH8   A0A0Q9X7N1   A0A0Q9XE66   A0A0Q9XH18   A0A0Q9X730   A0A0Q9X792   B4GBW2   A0A0Q9X9I3   A0A0Q9XGL4   A0A0Q9XIF8   A0A1I8P4R3   A0A0Q9X716   B4KSA4   A0A0Q9X728   Q293D0   A0A182QBJ9   A0A0Q9XJP9   A8DYE2-3   A0A0R3NKT9   A0A0Q9WA52   A0A0Q9W945   A0A0R3NKI6   A0A0Q9W9P5   A0A0Q9VYT9   A0A0R3NKP2   A0A0Q9VY84   A0A0Q9VY01   A0A0Q9VY23   A0A0R3NSQ6   B4MFT5   A0A0Q9W5Y3   A0A0R3NKE0  

Pubmed

19121390    22118469    26354079    25474469    25348373    26823975    + More
25401762    20566863    20920257    23761445    24845553    28004739    17994087    18362917    19820115    25830018    25315136    24495485    25244985    15632085    10731132    12537572    12537569    17018572    18327897    18057021    23185243   

EMBL

BABH01018309    BABH01018310    ODYU01012508    SOQ58857.1    AGBW02007980    OWR54354.1    + More
RSAL01000034    RVE51394.1    KQ461073    KPJ09541.1    NEVH01012087    PNF30784.1    ACPB03011245    ACPB03011246    ACPB03011247    GEDC01003984    JAS33314.1    GEDC01024308    JAS12990.1    GBBI01002542    JAC16170.1    KX249699    AOR81476.1    GAKP01021006    JAC37946.1    GAKP01021007    JAC37945.1    GDHC01017779    JAQ00850.1    GBHO01015907    JAG27697.1    GBHO01015906    GBHO01015904    GBRD01001642    JAG27698.1    JAG27700.1    JAG64179.1    AAZO01000540    DS235018    EEB10519.1    ADMH02002207    ETN57806.1    GFXV01002660    MBW14465.1    DS232383    EDS40935.1    GGMR01016906    MBY29525.1    KK852639    KDR19648.1    GANO01002328    JAB57543.1    GGMS01002268    MBY71471.1    GFDF01007254    JAV06830.1    GGMR01004368    MBY16987.1    GEZM01035130    GEZM01035129    JAV83389.1    GEZM01035131    GEZM01035128    JAV83388.1    CH902619    EDV36578.2    ABLF02021661    ABLF02021662    GGFM01001209    MBW21960.1    GFXV01006452    MBW18257.1    KQ971354    KYB26442.1    UFQS01000264    UFQT01000264    SSX02178.1    SSX22555.1    UFQS01001837    UFQT01001837    SSX12518.1    SSX31961.1    GBXI01005697    JAD08595.1    EFA06982.2    GDHF01024393    JAI27921.1    GBXI01013708    JAD00584.1    GDHF01005914    JAI46400.1    GDHF01004167    JAI48147.1    GDHF01010039    JAI42275.1    GAMC01020268    JAB86287.1    GAMC01020269    JAB86286.1    ABLF02033844    CH940667    KRF77701.1    CH916367    EDW01485.1    CH933808    KRG04087.1    KRG04093.1    KRG04090.1    KRG04094.1    KRG04095.1    KRG04092.1    CH479181    EDW31341.1    KRG04089.1    KRG04098.1    KRG04097.1    KRG04091.1    EDW08386.2    KRG04096.1    CM000071    EAL24681.3    AXCN02000567    KRG04088.1    AE013599    AY069181    KRT01476.1    KRF77707.1    KRF77700.1    KRT01464.1    KRF77695.1    KRF77702.1    KRT01474.1    KRF77704.1    KRF77705.1    KRF77696.1    KRF77698.1    KRF77699.1    KRT01465.1    KRT01466.1    KRT01473.1    KRT01477.1    KRT01478.1    EDW57256.2    KRF77703.1    KRT01457.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053240    UP000235965    UP000015103    + More
UP000075902    UP000009046    UP000000673    UP000002320    UP000027135    UP000075900    UP000076407    UP000007801    UP000007819    UP000007266    UP000092443    UP000095301    UP000091820    UP000008792    UP000075920    UP000075880    UP000076408    UP000001070    UP000009192    UP000008744    UP000095300    UP000001819    UP000075886    UP000000803   

PRIDE

H9IXK4    A8DYE2   

Pfam

PF18139   LSDAT_euk        + More
PF16519   TRPM_tetra
PF00520   Ion_trans

Interpro

IPR041491   TRPM_SLOG        + More
IPR005821   Ion_trans_dom       
IPR032415   TRPM_tetra       
IPR037162   TRPM_tetra_sf       
IPR029597   TRPM6       
IPR029588   TRPM1       

Gene 3D

1.20.5.1010    

ProteinModelPortal

H9IXK4   A0A2H1X0Q7   A0A212FKT9   A0A3S2P3F4   A0A194R122   A0A2J7QQB7   + More
T1HST8   A0A1B6E5Z4   A0A1B6CHW9   A0A023F3Y9   A0A384T281   A0A034V3S7   A0A034V838   A0A146L203   A0A0A9Y3T5   A0A0A9YDY3   A0A182UK91   E0VAW3   W5J248   A0A2H8TK17   B0X5J8   A0A2S2PJE0   A0A067R873   W4VRK0   A0A2S2Q1B3   A0A182RUF7   A0A1L8DKF9   A0A182X2A2   A0A2S2NII2   A0A1Y1MC38   A0A1Y1MEE7   B3MEV7   X1XTV0   A0A2M3Z0A8   A0A2H8TVJ6   A0A139WEV5   A0A336KEI0   A0A1A9XFE3   A0A336L3N5   A0A0A1XCB9   D6WQJ1   A0A1I8M2P5   A0A1I8M2P8   A0A1I8M2Q0   A0A1I8M2P7   A0A1I8M2P6   A0A1I8M2Q1   A0A1I8M2Q2   A0A1I8M2P9   A0A0K8UMW6   A0A1I8M2Q3   A0A1A9WWI0   A0A0A1WNF2   A0A0K8W6A0   A0A0K8WAM8   A0A0K8VUR6   W8AKE0   W8AZI2   J9JY68   A0A0Q9WAX8   A0A182WB94   A0A182IJN8   A0A182Y860   B4J9S1   A0A0Q9XIH8   A0A0Q9X7N1   A0A0Q9XE66   A0A0Q9XH18   A0A0Q9X730   A0A0Q9X792   B4GBW2   A0A0Q9X9I3   A0A0Q9XGL4   A0A0Q9XIF8   A0A1I8P4R3   A0A0Q9X716   B4KSA4   A0A0Q9X728   Q293D0   A0A182QBJ9   A0A0Q9XJP9   A8DYE2-3   A0A0R3NKT9   A0A0Q9WA52   A0A0Q9W945   A0A0R3NKI6   A0A0Q9W9P5   A0A0Q9VYT9   A0A0R3NKP2   A0A0Q9VY84   A0A0Q9VY01   A0A0Q9VY23   A0A0R3NSQ6   B4MFT5   A0A0Q9W5Y3   A0A0R3NKE0  

PDB

5ZX5     E-value=1.99419e-43,     Score=440

KEGG

101738592    K04978 transient receptor potential cation channel subfamily M member 3 | (RefSeq) transient recepto

GO

GO:0016021   GO:0051262   GO:0005216   GO:0016020   GO:0010960   GO:0097682   GO:0055069   GO:0034703   GO:0005385   GO:0072509   GO:0098655   GO:0070838  

PANTHER

PTHR13800:SF15   PTHR13800:SF13  

Subcellular location

Membrane  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.31042

Exp number, first 60 AAs:

0.0003

Total prob of N-in:

0.03940

outside

1  -  247

 

 

Pi

220.576272

Theta

154.718021

Tajima's D

1.042951

CLR

0.065918

CSRT

0.671516424178791

Interpretation

Uncertain