SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11308
Pre Gene Modal
BGIBMGA001838
Annotation
PREDICTED:_uncharacterized_protein_LOC105387844_[Plutella_xylostella]
Location
Bomo_Chr19(+):2806375-2826303      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 2.864
 

Sequence

CDS
ATGAAACGACACGATGCCATCACTAAAATGACGGAGCTAGTGCAGGAATACGATCCATCAGCGACCAGAGTGCACATTTTAAGAAAAATTGGGAGTCTACGGGCGTGCGTACGTAGGGAATACAAGCGCGTCCAAGAGAGTAGGAGGAAAGCTACTTGTGAAGAAGAAGTTTACGTTCCTAATCTGTGGTATTACGACTTACTGTCATTCATATTTAAGAACGAAGCGCCGGAGCCAGCAAGATCGCCTATCCCCACTGCTCGGGGCGGTGCGGCGGGGCGCGGGGGTCGAGCCACCGATTCGCCCAACCCAACCGCCAGCACGTTCAGTGACCTGCGCGACGCGCTGCTCGACGCACGCATCGGCATGTCGGAAGAAAACGTAGTGTTCCCACAAAAAATACTGAAGAAATTCATACTTTTATACAAAGATCTGCCGTGTTTGTGGGACAAAGAATGTCCAGCTTACAAAATCAAAATGAAACGACACGACGCCATCACTAAAATGACGGAGTTAGTGCAGGAATACGATCCGTCCGCGACCAGAGTGCACATTTTAAGAAAAATTGAGAGTCTACGGGCATGTGTTCGTAGGGAATACAAGCGCGTTCAAGAGAGCAGGAGGAAGGCTAATTGTGAAGAAGAAGTTTACGTTCCTAATCTGTGGTATTACGACTTACTGTCATTCATATTTAAGAACGAAGCGCCGGAGCCAGCAAGATCGCCTATCCCCACTGCTGAAACAGAGGAAGAAGAAGACGATGACTGTCAAGTGTTCGACAGCCAATCTGTGGACTACTCTAACGACTTTAACGAAACAGGGAACATGGTGGAAGCTGATGATGTGTCAACGATATCCAAAAGATATTTGACGTTTGAACCTGAATCTACAACTTCAAAAGTTAAGAGACAGTTTACTGAAGTGGAAGATGAATACGATGCAATTGAAATGGTGCTCACACGGTCCGAGAAGATGAGGTCGTCACGCCTTGACCGGCCCGGCAACGAAGCTGTCTCGGGCTCAACATCGCAAGACGCACAGCAACGAGCTGTGTCGGCCGCGCCGCGTTCGGGAGTGACGCAGGGACCGCCACCGATGGCGGCAACCTCCTCCCAGTCAACCGCGCCGCGTTCGGGAGTGACGCAGGGACCGCCACCGATGGCGGCACCCTCCTCCCAAGTGGAAAAGTGTCCGGGAGTGCCGCGGGGCTCACAAGCGATGCCCCCCTCCCGCCAAATATTGCCTACGCAATACTCGCCGGCGTCGCCAACGGGACCGAACAGCGGGGTCTGTCGTCGAGTGGTCAGACCTCCCAGCACCGCGACACCGGCAACAACTTCAGGCGACGCAGCAACGGAGAGCGTCGTATCCGCGAGCCAGAACAAGAAGGAGTCAGCGCTCGCGGCCAATCAAATAGTACACGGGTCCCACATCACGGACGCCGCTGCCAAAATCTCGACGACAGAAGAAGGCTCCACACTCCGCGACGGGATGGCGCCACCAGTACGAGGATCTTCAAGAAAGTCGAGTCAACAGTCACAACGGCTGTTGCTTATGGCGCGCCTCAAGGAAGAGCATCTTCGCGCCAAGGAAGAACAAGCCCGACTCCAAGCAGAGCTCGCCGCCGCCCGCATCTCAACATTAGAAGCCGAAGCGCTCGTTGAAGAGGAGGAAGATGCGCGCACAACACTCACGGAGGACGAGAACGAGCAATCGCAGCGCATCGATACATGGCTCAGTCAGCAACGATCGATCGCGCTACAGGGAGTCGAAGAAAGAGTAATGCAGCCAACACACGGATCACCAGCCACCATCGAGCAAAAGCAACTGGAACTTCCCGCACCAATAGAACAGCTGAAGCTACCGGCCCCTGCCGCGGCACCGATTGCCGTACCTGTCGCACCGAAGAGCGACATCGCCGAACTAGCAGCTGCCATCGCGACGGCCGCCCGCCAAGCCAGGCCCGGACCATCGCATCGGTACTACGGGGAGCTTCCAGTGTACAGTGGATCGCACCAAGAATGGCTCTCCTTCAAGGTCTCCTACGCCGAATCAGCGGACAGCTTCAGCGCCGCAGAGAACACTGCGAGACTTCGGCGTACGTTGAGAGGAAGAGCAAGAGAAGCGGTCGAAAACTTGTTGCTGCATTACACCGAGCCCGCCGAGATCATGCGGACTCTAGAATCGCGCTTCGGACGTCCAGAAGCAATCGCCGCAACGGAGCTGGAACGACTGCGCGCGCTGCCACGCTGCACGGACACACCGAGGGACATCTGCGTTTTCGCGAACAAGGTGAACAACGTCGTCGCCGCTCTGAGGGCCCTCGACCGCGTACATTATATGTACAACCCGGAGCTCACCAACATCACATCAGAGAAGCTGCCGTCCACTCTACGCCACCGCTGGTTCGAATTCTCAGCGACTCAACCGGCGGGAGAACCGGACCTCGTCAAGCTGTCGCGCTTCCTGCAACGCGAGGCGGACCTGTGCAGCCCATACGCACAGCCGGAGCCAGAGACGAGAGTGGAGAACACCAGCGGTCGGCGGAAGATGGTGAACACGCCTCAGAGGACGCACACCACGCAAGCGAAGGAAGAGAGGAAATGCGCAGCATGTCAGAAGCCGGGGCACATCCCACAAGATTGTCCCGAATTCAAGAGAGCAGCCGTCAGCGAGCGCTGGGATACGGCGAAGCGCGAGAATTTGTGTTTCCGGTGCCTACGGTTCCGGTCCCGGGGACACGTATGCAAAAAGAAGAAGTGCGGCGTCGACAGCTGCGAACGCACGCACCACGAGCTGTTGCATAAGAAGCCAGCATGGCAGAAGCCGAAAGAAAAAGAAGAGGCGGTCACCTCGACGTGGGCCGCAAGAAGTGCGACAGCCTACCTAAAGATGGCGCCAATTACCGTTATCGGACCGGCGGGAGAAGCAGATACATGGGCCCTGCTGGACGACGGGTCAACGATCTCGCTGATTGACGAAGACTTCGCGAGACGAGTGGGCGCCAAAGGACCGATCGAACCCCTCTTCATCACTGCCATCGGAGACAATAAGATAGACGCAACACGCTCACGACGCGTCCCGCTGAAGCTATGCGGACGCACGGGGGAACCGCAAGAACTGAACCTACGGACAGTCAACGGCTTAAAATTAACACCACAGCGACTGAACATCGAAGTCCTCGCGTCGTGCCATCACCTCACCGACCTCCGCCATCACTTCAAAACGAGCTACGCCTCGCCGAAGATCCTGATCGGCCAAGACAACTGGCACCTGCTGGTGACGGAGGAGATGCGGACGGGACGACGCGATCAACCAGTGGCGTCTCGTACTCCACTCGGGTGGGTCGTGCACGGAGCACACCCGGGAGGCAAGAGACAGCGCGTCAACTTCGTGGGACACGCGACGACGGTCGACACGAACATGGACGAAGCCCTCAAACAGTACTTCGCGATCGAGGGACCCACCGTCGCCGCCAAGACGCCGAAGAATGACCCAGACGAGCGCGCGCTGAAGATCCTGCGAGAGACCACTCAACAGCGACCCGGCGGCCGCTACGAGACCGCACTGCTGTGGCGTGAGGAGGGCCTGAAGATGCCCAACAATCTTGAAGCCGCAATGAATCGCCTGACGTCCGTAGAGAAGAAACTGGAGAAGGATCCAAATTTGAAAGAGCGCTACAAGCAACGAACAAACGCACTGGTAGCAAAAGGATACGCCGAAGTAACTCCGTCGACGGAGGGAAGAAGCCCAAACGACTTCCTGCTCACCGACCCGGACCTGCTGCAGTCGCTGCCCGGAGCGATGATGCGCTTCAGGCAGCACGCCGTTGCCGTCTCCACGGACATCGCGGAGATGTTCATCCAGATAGGCGTCCGAAGCGAGGACCGCGACGCGCTCCGGTACTTGTGGAGGGAGAACCCTTCACGAGAACCTATAGAATACCGGATGAGGTCCATCGTCTTTGGCGCGACAAGCTCGCCTGCAACCACCATCTGCGTGAAGAACCGACTGCAGTACCCGGACGCCGCCGACCTCAAGCTCCACACGTACGTGGACACGAGCAAGTACGCCCACGACGCCGCGTTGTACTGGCGCGTGGAGACGCCCGACGGGGAGATGAGGACCTCCCTCGCCAAAGCCCGAGTCGCACCCATGAAGCTAACATCGATACTGCATCTCGAGCTACAAGCCGCCGTGATGAGCAGCCGCATGGCCGCGGCCGTCACGGAAGAACACAATAGAAAGCCAGACAAGAGTGTTCTGGACAGACAGCGCCACCGTATTGACCTGGCTGCGAACGGGGTCGAGGTCGTATCGACCGTTCGTCGCTCACCGCATTGCAGCGATAGAAGAGAACAGCACTGTGGAGGAATGGCGCTGGGCCCGGAATACCTAAGACGGCATCCGGATGATTGGCCCGTACAACGGACTGCAAGAAGAGCAGAAGAGACGGGCGAAGAGAAGTGCGCAATGCTCGCCGTGAGCAGAGAGAGCCTCGGCGAAGCGATCCCGGACCCAAGACGCTTCTCCAAGTGGGAGAAGTACCTGCGTGCAACGGGGCGAATACTGCAATTCGTCGACCTATGCCGCAGAAGTCGCGAGCGCACTTATTACAAGAGGACCAGACGGAACCCGCGCTCGGACCCGACGTGGGAGAGAAATAGAAAGAAGACGACTTCGAAGACCCCGCTGAACACACCGCGGACGCCAGAGCAAGCAGTCATTCAATGGAAGACTTTAGACGCCGACACGCTTCGACGCGCCGAGACGCTCATTTGGCAACAGAGCCAGCGGGCAGCCTTCGAGGAAGAGATTTTGACGCTCCAGCGAGGGAAACAGATATCCCCAGCGAGCCGACTGCGAAACTTGTCCGTAACTTACGCGGACGGGATACTGAAAATAAACGGACGCATCGGCAACATAGAGGGAGCTGACGTCATCACCTCGCCTCTCGTGCTAGACGGATCCCGACGCGAAACGAGACTGATGATAGACTTCATCCATAGAAAGATGCACCACGCCGGAACCGAAGCTACGATCGCCGAGTGCCGACAGTCGTACTGGGTCTTACGCCTACGCCCAGTGACACGGAGCGTGATCCACAATTGTCTTCCGTGTCGTATCCGCAAGGACACTCCACCGCGTCCAGCCACAGGCGACCACCCACCGAGCAGACTGGCACACCATCGGCGACCATTTACATACGTGGGCCTCGATTACTTCGGGCCCTACCAAGTTACCACCGGCAGAAGCACCCAGAAGCACTACGTGGCCATCTTCACATGTCTCACTACGCGTGCGATACATTTAGAACCGGCAGCGAGCCTCAGCACGGACTCAGCAGTGATGGCACTCCGGCGCATGATCGCGCGCCGGGGAGCTCCGACGGAAGTATGGAGCGACAACGGCACCAACTTACGAGGTGCCGACAAGGAGCTGCGCCAAGCTATGGACAAGGCGACTGAGCATGAAGCGAGCTTAAGGCTTATACAATGGCGCTTCATCCCACCGGGCGCGCCTTTCATGGGCGGCGCCTGGGAGAGAATGGTACGGGCAGTAAAGGCCGCGCTCTCGGCCACGGAACAGACGAGGCACCCGACGCCCGAAATATTTCATACTCTGTTAGCAGAGGCAGAGTTCACAGTGAACAGCCGACCTCTCACCCATGTATCGGTGAGCGCCGACGATCCCGACCCTCTGACACCGAACCACTTCCTGCTGGGAGGCCCGGCGCGAGTCCCCGTGCCGGGCAAATTTGACGACGCCGACCTCATAGGGCGCGCACACTGGCGCGCAGCACAACGTCTGGCAGATGTGTTCTGGAGTCGCTGGCTCCGGGAGTACCTGCCCGACCTGCAGAACCGGCGGGAGCCCCACAGCCGCGGGCCCGCCCTGAAGATAGGCGACGTCGTGATAATAGCAGACGGAACGCTCCCACGGAACACCTGGCCACGTGGGATCATCCAGGAGGTTTACCCGGGGGCCGACGGCATCACTCGAGTGGTCGACGTACGCACCGCCGGCGGTATATTGCGACGCCCGGCAAAGAAGATCATCGTGCTGCCCACGATGTCCGCCGCTCACCAGGGAGGATGCAGCGACGTGAACGACGCTGCACGGCGGGAGGATGTTCGCGACGGACATGAATGA
Protein
MKRHDAITKMTELVQEYDPSATRVHILRKIGSLRACVRREYKRVQESRRKATCEEEVYVPNLWYYDLLSFIFKNEAPEPARSPIPTARGGAAGRGGRATDSPNPTASTFSDLRDALLDARIGMSEENVVFPQKILKKFILLYKDLPCLWDKECPAYKIKMKRHDAITKMTELVQEYDPSATRVHILRKIESLRACVRREYKRVQESRRKANCEEEVYVPNLWYYDLLSFIFKNEAPEPARSPIPTAETEEEEDDDCQVFDSQSVDYSNDFNETGNMVEADDVSTISKRYLTFEPESTTSKVKRQFTEVEDEYDAIEMVLTRSEKMRSSRLDRPGNEAVSGSTSQDAQQRAVSAAPRSGVTQGPPPMAATSSQSTAPRSGVTQGPPPMAAPSSQVEKCPGVPRGSQAMPPSRQILPTQYSPASPTGPNSGVCRRVVRPPSTATPATTSGDAATESVVSASQNKKESALAANQIVHGSHITDAAAKISTTEEGSTLRDGMAPPVRGSSRKSSQQSQRLLLMARLKEEHLRAKEEQARLQAELAAARISTLEAEALVEEEEDARTTLTEDENEQSQRIDTWLSQQRSIALQGVEERVMQPTHGSPATIEQKQLELPAPIEQLKLPAPAAAPIAVPVAPKSDIAELAAAIATAARQARPGPSHRYYGELPVYSGSHQEWLSFKVSYAESADSFSAAENTARLRRTLRGRAREAVENLLLHYTEPAEIMRTLESRFGRPEAIAATELERLRALPRCTDTPRDICVFANKVNNVVAALRALDRVHYMYNPELTNITSEKLPSTLRHRWFEFSATQPAGEPDLVKLSRFLQREADLCSPYAQPEPETRVENTSGRRKMVNTPQRTHTTQAKEERKCAACQKPGHIPQDCPEFKRAAVSERWDTAKRENLCFRCLRFRSRGHVCKKKKCGVDSCERTHHELLHKKPAWQKPKEKEEAVTSTWAARSATAYLKMAPITVIGPAGEADTWALLDDGSTISLIDEDFARRVGAKGPIEPLFITAIGDNKIDATRSRRVPLKLCGRTGEPQELNLRTVNGLKLTPQRLNIEVLASCHHLTDLRHHFKTSYASPKILIGQDNWHLLVTEEMRTGRRDQPVASRTPLGWVVHGAHPGGKRQRVNFVGHATTVDTNMDEALKQYFAIEGPTVAAKTPKNDPDERALKILRETTQQRPGGRYETALLWREEGLKMPNNLEAAMNRLTSVEKKLEKDPNLKERYKQRTNALVAKGYAEVTPSTEGRSPNDFLLTDPDLLQSLPGAMMRFRQHAVAVSTDIAEMFIQIGVRSEDRDALRYLWRENPSREPIEYRMRSIVFGATSSPATTICVKNRLQYPDAADLKLHTYVDTSKYAHDAALYWRVETPDGEMRTSLAKARVAPMKLTSILHLELQAAVMSSRMAAAVTEEHNRKPDKSVLDRQRHRIDLAANGVEVVSTVRRSPHCSDRREQHCGGMALGPEYLRRHPDDWPVQRTARRAEETGEEKCAMLAVSRESLGEAIPDPRRFSKWEKYLRATGRILQFVDLCRRSRERTYYKRTRRNPRSDPTWERNRKKTTSKTPLNTPRTPEQAVIQWKTLDADTLRRAETLIWQQSQRAAFEEEILTLQRGKQISPASRLRNLSVTYADGILKINGRIGNIEGADVITSPLVLDGSRRETRLMIDFIHRKMHHAGTEATIAECRQSYWVLRLRPVTRSVIHNCLPCRIRKDTPPRPATGDHPPSRLAHHRRPFTYVGLDYFGPYQVTTGRSTQKHYVAIFTCLTTRAIHLEPAASLSTDSAVMALRRMIARRGAPTEVWSDNGTNLRGADKELRQAMDKATEHEASLRLIQWRFIPPGAPFMGGAWERMVRAVKAALSATEQTRHPTPEIFHTLLAEAEFTVNSRPLTHVSVSADDPDPLTPNHFLLGGPARVPVPGKFDDADLIGRAHWRAAQRLADVFWSRWLREYLPDLQNRREPHSRGPALKIGDVVIIADGTLPRNTWPRGIIQEVYPGADGITRVVDVRTAGGILRRPAKKIIVLPTMSAAHQGGCSDVNDAARREDVRDGHE

Summary

Uniprot
NA  
ProteinModelPortal
NA  

Ontologies

KEGG
101740186    K16672 homeobox protein homothorax | (RefSeq) homeobox protein homothorax
GO
GO:0015074   GO:0003676   GO:0008270   GO:0005515   GO:0042555   GO:0006260   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Topology

Length:
2050
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00540999999999998
Exp number, first 60 AAs:
0.00096
Total prob of N-in:
0.00025
outside
1  -  2050
 
 

Population Genetic Test Statistics

Pi
209.397007
Theta
153.836557
Tajima's D
1.332333
CLR
0.581364
CSRT
0.747212639368032
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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