Gene

KWMTBOMO11298  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002769

Annotation

putative_Lancl1_protein_[Danaus_plexippus]

Location

Bomo_Chr19(+):2642576-2644159      View in EpiBrowser

Full name

LanC-like protein 3 homolog       + More
LanC-like protein 3      

Location in the cell

Cytoplasmic   Reliability : 1.653

CDS

ATGGTTCGGTATTTTGAAAACCCTTACGAAGACTACGAATGTGGTGCGGTTGCTATCTATATAGACACTATTTGTGGACAAATAAATGAATATTTAGAAAATATTACTAAGCGCTTACCAGCTACACGATCTAAAGTCGACGGTGGTCTTTATGTCGGCGTTACGGGAGTTTCTTTCATGTTTTACCATTTGGCCAAAAATCTGCGCCTGTCAGAAAATAAATCAGCTTATCTTGCAAAAGCACTGGAATATTTATCACCGGCCCTAGAAGTGTCTGCAGGAGATAAAACCTCCTTCTTACTGGGGGATGCTGGCACGTACGCTTTAAGCACAGTTTTGTACAAAGAAATGGGTGACGGCAGTTTTAAAGAAAGTTTGAAACAATATCAATCTTTGTTTAAGCTCTATCTCAACCCAAAATTTTTAAAGTGTGGAGGAGACGAGTTTTTCGTGGGTAGAGCTGGGTACCTTGCTGGAGCGCTCTGGCTAACCAGAGAACTGCAAACTCCAATATTATCGCCAGATGAATGGTTCCAGTTATGTAATGTGATTGTTGATTCTGGTCGAGAATATTCCTCTAAATTCAAAAGTCCTTGTCCGCTCATGTATCATTATTACAATACAGAGTATTTAGGAGCTGCACACGGACTCTCTTTTATATTACAAATGCTGTTAACTGTACCTGGGTATATATCGCACAACAAGTCAGCCGCACACGATATCAAAACAACTATAGACTATATGGTATTCTTACAAACTGATGAAGGAAACTGGCCGGCTTGTATGGAAGAGAGAACCATGAAGGAGCACAAATTAGTACACTGGTGCCATGGAGCGCCTGGAGTAGTATACCTCATGGCAAAGGCTTATTTAGTATACCAAGAGCAGAAATATCTTGAAGCTTGTATTAAAGCAGCTGAATTAATCTGGAAGAAGGGCTTGCTCTTTAAAGGACCTGGTATCTGCCATGGTGTGTCCGGTAATGGTTATGTTTTCCTTCTGTTGTATCGACTTACTGACGAGGAAAAATATTTATATCGGGCAAAGATGTTTGCCGAGTTCCTGAACACAGAAGCTTTTAACAGAGATGCCAAACTGCCTGATAATCCTGAGAGTTTGTATGAGGGAGCAGCAGGTGCTGTTTGCTTTTTATCAGATCTACTTTACGTAGATAAGGCTGAATTCCCATTCCAAGATGTATTTACTTCTTATTAG

Protein

MVRYFENPYEDYECGAVAIYIDTICGQINEYLENITKRLPATRSKVDGGLYVGVTGVSFMFYHLAKNLRLSENKSAYLAKALEYLSPALEVSAGDKTSFLLGDAGTYALSTVLYKEMGDGSFKESLKQYQSLFKLYLNPKFLKCGGDEFFVGRAGYLAGALWLTRELQTPILSPDEWFQLCNVIVDSGREYSSKFKSPCPLMYHYYNTEYLGAAHGLSFILQMLLTVPGYISHNKSAAHDIKTTIDYMVFLQTDEGNWPACMEERTMKEHKLVHWCHGAPGVVYLMAKAYLVYQEQKYLEACIKAAELIWKKGLLFKGPGICHGVSGNGYVFLLLYRLTDEEKYLYRAKMFAEFLNTEAFNRDAKLPDNPESLYEGAAGAVCFLSDLLYVDKAEFPFQDVFTSY

Similarity

Belongs to the LanC-like protein family.

Keywords

Complete proteome   Reference proteome   Alternative splicing  

Feature

chain  LanC-like protein 3 homolog
splice variant  In isoform 2.

Uniprot

H9IZT4   A0A2A4JDW0   A0A212EZH8   A0A2H1X033   A0A0L7KTY8   A0A194QX57   + More
A0A194QEU9   N6U318   U4UHG5   A0A0T6AW46   A0A1Y1KXZ1   A0A1Y1KX01   D6WR42   A0A2J7QQT4   E1ZYF8   A0A0J7KHE2   A0A023F7L6   A0A0N7Z8N7   C3ZME3   R4G4V9   A0A067QQ23   A0A224XD49   W4XEU5   A0A1B6CNQ0   A0A1W4XDT1   A0A1S3IQA6   A0A2H8TQM8   A0A2S2P8I3   J9K0R7   A0A3S3NZQ3   A0A0P6IW80   A0A1S4EWF3   A0A224Z2N4   Q17NS4   A0A0B6ZXQ7   A0A131XXB4   A0A1S3D9V8   B7QMW6   R7UM20   A0A026VTT0   A0A131Z9U3   L7ML24   A0A2I4BZ12   A0A2B4SPZ8   A0A3P9JVN5   H2LYK8   A0A182GM93   A0A3P9IJB4   A0A3P8UXZ4   A0A3Q3QCB2   A0A2P8ZDK7   A0A3P9QI78   A0A3B4TN88   A0A3Q3BK64   H2TVK4   A0A3B4Y5I3   A0A3B3DVF3   A0A3Q0TA64   A0A3B3YBV3   A0A087Y7S6   A0A3Q2D5M1   A0A3Q3MRI3   G1SR89   V4C0B3   A0A3P8YSZ5   A0A3B5A171   A0A3B5R874   A0A0K8TK76   I3MJJ2   A0A3Q3XCY7   A0A3Q1CH45   A0A3P8RR91   D3ZG98   A0A3B3QB62   A0A1W4ZWY0   A0A2U4C157   A0A0R3NZE3   B4H4S0   Q29HZ1   A0A3Q1EBV4   I3KA18   A0A2K5WM40   F7DVY1   A0A1B0GQ92   T2MBE4   A0A3Q3KWB3   A0A341D6J8   A0A2Y9FP44   A0A287AZ75   M3XCW9   A0A2K6GJ09   B4PYG1   F6U2W0   Q8CD19   H2R4S0   Q6ZV70   A0A1V4JBZ4   A0A1S3G0N4   G1QJI0   A0A2K5E8F1  

Pubmed

19121390    22118469    26227816    26354079    23537049    28004739    + More
18362917    19820115    20798317    25474469    27129103    18563158    24845553    26999592    17510324    28797301    23254933    24508170    30249741    26830274    25576852    17554307    26483478    24487278    29403074    21551351    29451363    21993624    25069045    23542700    26369729    15057822    29240929    15632085    17994087    25186727    17431167    24065732    17975172    17550304    17495919    16141072    19468303    15489334    16136131    14702039    15772651   

EMBL

BABH01039988    NWSH01001952    PCG69583.1    AGBW02011289    OWR46890.1    ODYU01012423    + More
SOQ58720.1    JTDY01005884    KOB66516.1    KQ461073    KPJ09545.1    KQ459053    KPJ04063.1    APGK01041551    KB740994    ENN75965.1    KB632356    ERL93419.1    LJIG01022664    KRT79369.1    GEZM01073535    GEZM01073534    JAV65020.1    GEZM01073533    GEZM01073532    JAV65021.1    KQ971354    EFA06012.2    NEVH01012082    PNF30948.1    GL435204    EFN73857.1    LBMM01007558    KMQ89626.1    GBBI01001351    JAC17361.1    GDKW01002835    JAI53760.1    GG666644    EEN46399.1    ACPB03021727    GAHY01001035    JAA76475.1    KK853069    KDR11825.1    GFTR01006089    JAW10337.1    AAGJ04123659    GEDC01022284    JAS15014.1    GFXV01004699    MBW16504.1    GGMR01013073    MBY25692.1    ABLF02039538    NCKU01001361    NCKU01001360    RWS12311.1    RWS12318.1    GDUN01000534    JAN95385.1    GFPF01009328    MAA20474.1    CH477197    EAT48329.2    HACG01026498    CEK73363.1    GEFM01003892    JAP71904.1    ABJB010337534    ABJB010435871    ABJB010532111    ABJB010758887    ABJB011051378    ABJB011052594    DS973378    EEC20188.1    AMQN01007973    KB301890    ELU04987.1    KK107942    QOIP01000007    EZA47090.1    RLU20249.1    GEDV01000975    JAP87582.1    GACK01001165    JAA63869.1    LSMT01000039    PFX31189.1    JXUM01074194    KQ562816    KXJ75071.1    PYGN01000089    PSN54550.1    AYCK01006151    AAGW02040515    AAGW02040516    KB201750    ESO94854.1    GDAI01002931    JAI14672.1    AGTP01031394    AGTP01031395    AGTP01031396    AGTP01031397    AGTP01031398    AABR07037146    AABR07037147    AABR07037148    CH379064    KRT06402.1    CH479209    EDW32682.1    AERX01029954    AQIA01084128    AQIA01084129    JSUE03045288    AJVK01006587    HAAD01003030    CDG69262.1    AEMK02000113    AANG04003539    CM000162    EDX02023.1    AK045254    AK031623    AK043841    AL672060    BC115944    AC196243    AC205736    NBAG03000411    PNI27569.1    AK124915    AL627244    AL121577    BC093667    BC093669    LSYS01008075    OPJ69711.1    ADFV01062823    ADFV01062824    ADFV01062825    ADFV01062826    ADFV01062827   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    + More
UP000019118    UP000030742    UP000007266    UP000235965    UP000000311    UP000036403    UP000001554    UP000015103    UP000027135    UP000007110    UP000192223    UP000085678    UP000007819    UP000285301    UP000008820    UP000079169    UP000001555    UP000014760    UP000053097    UP000279307    UP000192220    UP000225706    UP000265180    UP000001038    UP000069940    UP000249989    UP000265200    UP000265120    UP000261600    UP000245037    UP000242638    UP000261420    UP000264800    UP000005226    UP000261360    UP000261560    UP000261340    UP000261480    UP000028760    UP000265020    UP000261640    UP000001811    UP000030746    UP000265140    UP000261400    UP000002852    UP000005215    UP000261620    UP000257160    UP000265080    UP000002494    UP000261540    UP000192224    UP000245320    UP000001819    UP000008744    UP000257200    UP000005207    UP000233100    UP000006718    UP000092462    UP000261660    UP000252040    UP000248484    UP000008227    UP000011712    UP000233160    UP000002282    UP000002280    UP000000589    UP000002277    UP000005640    UP000190648    UP000081671    UP000001073    UP000233020   

PRIDE

H9IZT4    D3ZG98    Q29HZ1    Q8CD19    Q6ZV70   

Pfam

PF05147   LANC_like        + More
PF00497   SBP_bac_3
PF00060   Lig_chan

Interpro

IPR012341   6hp_glycosidase-like_sf        + More
IPR020464   LanC-like_prot_euk       
IPR007822   LANC-like       
IPR001320   Iontro_rcpt       
IPR001638   Solute-binding_3/MltF_N       

Gene 3D

1.50.10.10    

CDD

cd04794  euk_LANCL

ProteinModelPortal

H9IZT4   A0A2A4JDW0   A0A212EZH8   A0A2H1X033   A0A0L7KTY8   A0A194QX57   + More
A0A194QEU9   N6U318   U4UHG5   A0A0T6AW46   A0A1Y1KXZ1   A0A1Y1KX01   D6WR42   A0A2J7QQT4   E1ZYF8   A0A0J7KHE2   A0A023F7L6   A0A0N7Z8N7   C3ZME3   R4G4V9   A0A067QQ23   A0A224XD49   W4XEU5   A0A1B6CNQ0   A0A1W4XDT1   A0A1S3IQA6   A0A2H8TQM8   A0A2S2P8I3   J9K0R7   A0A3S3NZQ3   A0A0P6IW80   A0A1S4EWF3   A0A224Z2N4   Q17NS4   A0A0B6ZXQ7   A0A131XXB4   A0A1S3D9V8   B7QMW6   R7UM20   A0A026VTT0   A0A131Z9U3   L7ML24   A0A2I4BZ12   A0A2B4SPZ8   A0A3P9JVN5   H2LYK8   A0A182GM93   A0A3P9IJB4   A0A3P8UXZ4   A0A3Q3QCB2   A0A2P8ZDK7   A0A3P9QI78   A0A3B4TN88   A0A3Q3BK64   H2TVK4   A0A3B4Y5I3   A0A3B3DVF3   A0A3Q0TA64   A0A3B3YBV3   A0A087Y7S6   A0A3Q2D5M1   A0A3Q3MRI3   G1SR89   V4C0B3   A0A3P8YSZ5   A0A3B5A171   A0A3B5R874   A0A0K8TK76   I3MJJ2   A0A3Q3XCY7   A0A3Q1CH45   A0A3P8RR91   D3ZG98   A0A3B3QB62   A0A1W4ZWY0   A0A2U4C157   A0A0R3NZE3   B4H4S0   Q29HZ1   A0A3Q1EBV4   I3KA18   A0A2K5WM40   F7DVY1   A0A1B0GQ92   T2MBE4   A0A3Q3KWB3   A0A341D6J8   A0A2Y9FP44   A0A287AZ75   M3XCW9   A0A2K6GJ09   B4PYG1   F6U2W0   Q8CD19   H2R4S0   Q6ZV70   A0A1V4JBZ4   A0A1S3G0N4   G1QJI0   A0A2K5E8F1  

PDB

3E73     E-value=1.03105e-58,     Score=574

KEGG

101746341    no KO assigned | (RefSeq) lanC-like protein 3

GO

GO:0003824   GO:0016021   GO:0004970   GO:0005886   GO:0003676   GO:0032259   GO:0008276   GO:0042555   GO:0006260   GO:0006811   GO:0005622   GO:0006810  

Length:

404

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

22.1413

Exp number, first 60 AAs:

5.53401

Total prob of N-in:

0.33086

outside

1  -  404

 

 

Pi

208.029414

Theta

112.530404

Tajima's D

-1.121698

CLR

0.72772

CSRT

0.118894055297235

Interpretation

Uncertain