SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11295
Annotation
glutathione_S-transferase_1?_isoform_C-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.458
 

Sequence

CDS
ATGTCTTCCTTAAAATTATACCATTTCCCCGTGAGCGGGCCTTCTAGAGGAGCACTACTCGCAGCTAGAGCCATAGGCATTCCAATACAAATTGAAATAGTAAATCTGTTTAAAAAAGAACAACTGCAAGAAAGTTTCTTAAAACTTAACCCACAGCATTGTGTACCTACACTGGACGATAATAACTTTGTTCTATGGGAAAGTAGAGCTATCGCATGCTATTTAGCCGATAAATATGGAAAAGACGATCAATGGTATCCAAAGGATTTACAAAAACGCGCAGTCGTAAACCAGAGATTATACTTTGACAGCGCATCTTTGTATGTTAAAATAAGAGCAATTTGTTTCCCAATATTATTCCTGGGTGAAACGGAGATTAAACAAAGTTTAAAGGATGACCTTAACTCTACATTGAGTTTCCTCAATCAGTTTTTAGAGAAGACCAAGTGGGTGGCAGCTGATCACCCCACAATTGCAGACACATCTATTTATGCATCTATGTCTAGTATTTTGGCTGTTGGATGGGATATATCAAGTTTTCCAAACATTCAAAGATGGATTAAAGATTGCTTATTATTGCCTGGAGCACAAGAAAATGAAGATGGTGCTCGAACATTTGGAGATGCCGTAAAAAAGAATATCAAACAATAA
Protein
MSSLKLYHFPVSGPSRGALLAARAIGIPIQIEIVNLFKKEQLQESFLKLNPQHCVPTLDDNNFVLWESRAIACYLADKYGKDDQWYPKDLQKRAVVNQRLYFDSASLYVKIRAICFPILFLGETEIKQSLKDDLNSTLSFLNQFLEKTKWVAADHPTIADTSIYASMSSILAVGWDISSFPNIQRWIKDCLLLPGAQENEDGARTFGDAVKKNIKQ

Summary

Similarity
Belongs to the GST superfamily.
EMBL
AB561088    BAJ33499.1    DQ311182    ABD36127.1    GCVX01000121    JAI18109.1    + More
NWSH01001952    PCG69586.1    KT984986    RSAL01000034    AMY26654.1    RVE51400.1    MG879017    AWX68897.1    KF482972    AIH07596.1    KF929214    AHW45912.1    MH177611    AYM01183.1    KM099194    AIL29324.1    ODYU01012758    SOQ59226.1    EU912435    ACK75953.1    AK405078    BAM20479.1    KQ459053    KPJ04059.1    AK401335    BAM17957.1    KQ461073    KPJ09550.1    GAIX01006667    JAA85893.1    KPJ04057.1    KPJ09552.1    JTDY01009037    KOB64176.1    KPJ04058.1    KPJ09551.1    AGBW02011289    OWR46886.1    KX229723    APW77584.1    GDAI01000037    JAI17566.1    KU522307    APX61026.1    AJWK01033041    APGK01045595    KB741037    ENN74626.1    BT128550    KB631678    AEE63507.1    ERL85323.1    GALX01006060    JAB62406.1    KX018745    APC23399.1    AJVK01001837    AJVK01001838    EU035824    ABV44726.1    KQ971351    EFA06571.1    KJ868731    AIL23532.1    LJIG01001159    KRT85781.1    GFDF01000361    JAV13723.1    GEZM01037751    JAV81964.1    GANO01001862    JAB58009.1    UFQS01000045    UFQT01000045    SSW98457.1    SSX18843.1    JN628446    QKKF02019699    AEY80034.1    RZF39717.1    KF680488    AHC08050.1    GFDF01000371    JAV13713.1    GEDC01017596    JAS19702.1    JQ917469    AFJ75804.1    JQ917481    AFJ75816.1    AJWK01033040    EZ966119    ADK66961.1    GECZ01028809    JAS40960.1    CVRI01000047    CRK97493.1    GFDF01000473    JAV13611.1    DS235065    EEB11209.1    AF384858    CH477666    AAK64286.1    EAT37531.1    JXUM01063255    JXUM01063256    GAPW01004201    KQ562239    JAC09397.1    KXJ76340.1    KF680487    AHC08049.1    GFDL01005752    JAV29293.1    GECU01000082    JAT07625.1    GFDF01000358    JAV13726.1    KF680484    AHC08046.1    AJWK01033039    GFDF01000474    JAV13610.1    DS232397    EDS41105.1    KK852722    KDR17708.1    GFDF01000369    JAV13715.1    GEBQ01010473    JAT29504.1    EU124621    ABV60339.1    GFDF01000359    JAV13725.1    GECZ01027187    JAS42582.1    GFDF01000368    JAV13716.1    GBHO01025696    GBRD01011693    GDHC01000303    JAG17908.1    JAG54131.1    JAQ18326.1    OUUW01000005    SPP80476.1    KF061041    AGV08610.1    ATLV01014577    KE524975    KFB39026.1    KY773983    AVC68804.1    DQ315381    DQ315382    ABC46449.1    ABC46450.1    GFDF01000352    JAV13732.1    AXCM01001223    GFDF01000386    JAV13698.1    GGFM01002635    MBW23386.1    CAQQ02005212    JQ917483    AFJ75818.1    FJ855485    FJ855486    KY661296    AEV23867.1    AEV23868.1    AVA17383.1    GFDF01000351    JAV13733.1    AF448500    JQ917467    KU932316    AB980800    AAM21563.1    AFJ75802.1    APA33952.1    BAQ21980.1    GGFJ01009383    MBW58524.1    MG255130    AUW37958.1    GFDF01000353    JAV13731.1   
Pfam
PF13417   GST_N_3        + More
PF00043   GST_C
PF14497   GST_C_3
PF02798   GST_N
Interpro
IPR004045   Glutathione_S-Trfase_N        + More
IPR010987   Glutathione-S-Trfase_C-like       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR036249   Thioredoxin-like_sf       
IPR004046   GST_C       
IPR040079   Glutathione_S-Trfase       
SUPFAM
SSF52833   SSF52833        + More
SSF47616   SSF47616       
PDB
3AY8     E-value=7.91581e-124,     Score=1132

Ontologies

Topology

Length:
216
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.33908
Exp number, first 60 AAs:
0.19909
Total prob of N-in:
0.02638
outside
1  -  216
 
 

Population Genetic Test Statistics

Pi
234.908931
Theta
199.802021
Tajima's D
0.480501
CLR
0
CSRT
0.506274686265687
Interpretation
Uncertain
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