SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11275
Pre Gene Modal
BGIBMGA002762
Annotation
PREDICTED:_DNA_replication_licensing_factor_MCM4_[Amyelois_transitella]
Full name
DNA helicase       + More
DNA replication licensing factor MCM4      
DNA replication licensing factor mcm4-A      
DNA replication licensing factor mcm4      
DNA replication licensing factor mcm4-B      
Alternative Name
Protein disc proliferation abnormal
CDC21 homolog-A
Minichromosome maintenance protein 4-A
P1-CDC21-A
p98
Minichromosome maintenance protein 4
CDC21 homolog-B
Minichromosome maintenance protein 4-B
P1-CDC21-B
Location in the cell
Nuclear   Reliability : 2.169
 

Sequence

CDS
ATGTCTACACCATCTAAACGCCCGTCGTCGCGTGCATCATCGGAAGCATCGACTCCACGAAGAACGCGATCCTCACAACAAGTTATCGTTCCGGAGACTCCGCAGCGTTCAACCGGCACACCTTCGAAAGATGGCACTCCAAGTACACCACGAGCAGCTCCCGGTCCATCTCGGACACCCCGTACACCTCGTGAAGCTCCAGGAACATCACCTGCTCGAGCTCTTGCATCCAGTCCCATAGGCACAGATATAGACATGAGCTCTCCTCTTAATTACGGCACTCCAAGTTCTCTAAGCACTCCTCGCTCGCTCATGAGAGGCATCATGACCCCAGCACGACAGAGGGCTGACCTCCGAGGTCACCATATAGCTCCCAATGTACCGGCACCCACACCTACACGGAGAGTGGAGGGTTCAGAGGAGGCTTCGAGTGAGCCGCAGCTGGTCGTGTGGGGGACGGACGTGGCCATCGCAGAATGCAGGGAGAAATTCATCAAGTTCATCCAGAGATACGTGGAGCCAACTGCTGTCACCAACGAACCTCTTTACGAGCAAAAACTTGAGGAGATTCACACATTGGAAGAGCCATTCTTAGATGTGGACTGTGAACATGTCAGAGTTTTCGATTCCAAACTACACAGACAACTGGTCTCTTATCCCCAAGAGGTTGTGCCGGCATTCGACGCAGCAGTCAACGAGCTGTTCTTCGAGAAGTACCCGGCGGCCGTGCTCGAGCACCAGATCCAGGTCCGGCCGTACAACGCCCCGCCGCGACACATGAGAGACCTCAATCCGGAAGACATAGACCAGCTGGTGACTATATCGGGCATGGTGATACGCACGTCCGGCATCGTGCCGGAGATGCGGGAGGCGTTCTTCAAGTGCGCGGTGTGCGGCGCCGCGGCGGGCGGGGAGCTGCAGCGCGGCCGCGTGCCCGAGCCCGCACACTGCGCGCACTGCAACACGGCGCACTGCTTCCAGCTCATACACAACCGCTCGCACTTCAGCGACAAGCAGCTCGTCAAGCTGCAGGAGGCACCTGGTGACTGGTTTTTTTATTTTATTTTTATTGCTTAG
Protein
MSTPSKRPSSRASSEASTPRRTRSSQQVIVPETPQRSTGTPSKDGTPSTPRAAPGPSRTPRTPREAPGTSPARALASSPIGTDIDMSSPLNYGTPSSLSTPRSLMRGIMTPARQRADLRGHHIAPNVPAPTPTRRVEGSEEASSEPQLVVWGTDVAIAECREKFIKFIQRYVEPTAVTNEPLYEQKLEEIHTLEEPFLDVDCEHVRVFDSKLHRQLVSYPQEVVPAFDAAVNELFFEKYPAAVLEHQIQVRPYNAPPRHMRDLNPEDIDQLVTISGMVIRTSGIVPEMREAFFKCAVCGAAAGGELQRGRVPEPAHCAHCNTAHCFQLIHNRSHFSDKQLVKLQEAPGDWFFYFIFIA

Summary

Description
Acts as component of the Mcm2-7 complex (Mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the Mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for DNA replication and cell proliferation. Essential role in mitotic DNA replication but not in endoreplication.
Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.
Catalytic Activity
ATP + H2O = ADP + H(+) + phosphate
Subunit
Component of the Mcm2-7 complex. The complex forms a toroidal hexameric ring with the proposed subunit order Mcm2-Mcm6-Mcm4-Mcm7-Mcm3-Mcm5 (Probable).
Component of the mcm2-7 complex (RLF-M). The complex forms a toroidal hexameric ring with the proposed subunit order mcm2-mcm6-mcm4-mcm7-mcm3-mcm5 (Probable). The heterodimer of mmcm3/mcm5 interacts with mcm4, mmcm6, mcm7 and weakly with mcm2.
Component of the mcm2-7 complex (RLF-M). The complex forms a toroidal hexameric ring with the proposed subunit order mcm2-mcm6-mcm4-mcm7-mcm3-mcm5 (Probable). The heterodimer of mmcm3/mcm5 interacts with mcm4, mmcm6, mcm7 and weakly with mcm2. Begins to associate with zmcm6 at the neurula stage (By similarity).
Component of the mcm2-7 complex (RLF-M). The complex forms a toroidal hexameric ring with the proposed subunit order mcm2-mcm6-mcm4-mcm7-mcm3-mcm5 (Probable). The heterodimer of mmcm3/mcm5 interacts with mcm4, mmcm6, mcm7 and weakly with mcm2. Begins to associate with zmcm6 at the neurula stage.
Similarity
Belongs to the MCM family.
Keywords
ATP-binding   Complete proteome   DNA replication   DNA-binding   Helicase   Hydrolase   Nucleotide-binding   Nucleus   Phosphoprotein   Reference proteome   Cell cycle   Metal-binding   Zinc   Zinc-finger  
Feature
chain  DNA replication licensing factor MCM4
EC Number
3.6.4.12
EMBL
AGBW02008904    OWR52231.1    ODYU01012011    SOQ58075.1    NWSH01000348    PCG77182.1    + More
KQ461073    KPJ09565.1    KQ459053    KPJ04044.1    JXUM01024334    JXUM01024335    JXUM01087698    JXUM01087699    KQ563653    KQ560687    KXJ73554.1    KXJ81271.1    CH477637    EAT37976.1    BT021329    AAX33477.1    GFDL01015765    JAV19280.1    GDHF01000205    JAI52109.1    GAKP01007211    JAC51741.1    DS232126    EDS35571.1    JRES01000780    KNC28392.1    CH954177    EDV59679.1    CM000157    EDW89190.1    CH902619    EDV37871.1    GBXI01006639    JAD07653.1    GAMC01001959    JAC04597.1    CM002911    KMY92000.1    CH480816    EDW46767.1    AAAB01008948    EAA10355.3    APCN01004657    AE013599    AHN55958.1    S80255    CH933808    EDW09225.1    CH940648    EDW61876.1    GBYB01015313    JAG85080.1    KF471133    AHA42533.1    CP012524    ALC40873.1    AXCM01003001    CM000071    EAL25984.1    PYGN01002995    PSN29765.1    KK852792    KDR16461.1    CH963719    EDW71975.1    ATLV01023101    KE525340    KFB48455.1    CCAG010007472    CH920114    EDV90433.1    ADMH02000108    ETN67810.1    OUUW01000001    SPP75703.1    GEBQ01025966    JAT14011.1    GECZ01025975    JAS43794.1    GEZM01085192    JAV60140.1    KA645406    AFP60035.1    CH479223    EDW35043.1    CH916367    EDW02583.1    NNAY01001603    OXU23451.1    KQ971352    EFA06648.2    AXCN02000977    APGK01025879    KB740605    ENN80029.1    LBMM01000833    KMQ97399.1    NEVH01024950    PNF16400.1    KK107151    QOIP01000003    EZA57318.1    RLU25202.1    UFQS01000188    UFQT01000188    SSX00981.1    SSX21361.1    QCYY01001161    ROT80053.1    CVRI01000030    CRK92530.1    U44049    BC083031    AAC60225.1    AAH83031.1    CM004477    OCT74714.1    FR904442    CDQ63477.1    BC074670    AAH74670.1    GL437781    EFN69966.1    GL451850    EFN78411.1    KB201262    ESO98208.1    PPHD01022692    POI27685.1    GCES01027262    JAR59061.1    BT059391    ACN11104.1    CP026249    AWP03956.1    AZIM01000957    ETE68700.1    IACM01111057    LAB33628.1    CM004476    OCT76788.1    U29178    U46131    BC072870    Z15033    KK714268    KFQ35316.1   
Pfam
PF00493   MCM        + More
PF17207   MCM_OB
PF17855   MCM_lid
PF14551   MCM_N
PF01448   ELM2
PF02944   BESS
Interpro
IPR008047   MCM_4        + More
IPR018525   MCM_CS       
IPR027925   MCM_N       
IPR041562   MCM_lid       
IPR027417   P-loop_NTPase       
IPR033762   MCM_OB       
IPR031327   MCM       
IPR001208   MCM_dom       
IPR012340   NA-bd_OB-fold       
IPR003593   AAA+_ATPase       
IPR001005   SANT/Myb       
IPR017884   SANT_dom       
IPR009057   Homeobox-like_sf       
IPR000949   ELM2_dom       
IPR004210   BESS_motif       
IPR006578   MADF-dom       
SUPFAM
SSF52540   SSF52540        + More
SSF50249   SSF50249       
SSF46689   SSF46689       
PDB
6HV9     E-value=4.83071e-32,     Score=344

Ontologies

Topology

Subcellular location
Nucleus  
Length:
358
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00126
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01388
outside
1  -  358
 
 

Population Genetic Test Statistics

Pi
288.645183
Theta
171.762322
Tajima's D
1.794012
CLR
0.411089
CSRT
0.846207689615519
Interpretation
Uncertain
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