Gene

KWMTBOMO11273

Pre Gene Modal

BGIBMGA002761

Annotation

PREDICTED:_DC-STAMP_domain-containing_protein_1_[Bombyx_mori]

Location

Bomo_Chr19(+):2281476-2281816      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.402

CDS

ATGGAACGAAGAAAATACATTGACATCCACTCAGCAGCGCTGATGACTGAGAGGAGCAAACTAGTCACTCAAGTCCTGAAGCTGGCCTTAGAGATGATAACAGCAACGACCTTCGTGATGATGGACCGGATGTTCTACGAAGCTTTGGACATGGTGCGGCGCTACGCTGACCTGGAACCGAGGCAGGGGCTGCGAGACTTGGAGATAAAAGTACGGCTTGGAGAATATGGTTCGATAATTATCTGA

Protein

MERRKYIDIHSAALMTERSKLVTQVLKLALEMITATTFVMMDRMFYEALDMVRRYADLEPRQGLRDLEIKVRLGEYGSIII

Uniprot

H9IZS6   A0A2H1WNU5   A0A194QKQ9   A0A2A4JYT5   A0A194QVK6   A0A212FET7   + More
A0A3S2M5G5   E0VPK3   A0A0M9A671   A0A1W4XSW1   A0A3Q0IT30   A0A195DNH3   A0A3L8DAL2   E2ACN4   A0A026VW86   A0A151IQU4   A0A151X0B6   A0A0L7QTC8   A0A158P2L9   A0A0J7KDH5   A0A154P4B4   A0A088AL76   E2CAG3   F4W6D3   T1HLT9   A0A2A3EMH1   A0A2A3EP22   A0A195AW25   D6X0B8   A0A2J7Q8Y1   A0A067RUF8   A0A310S935   U4U5T4   A0A2P8Y877   N6TC46  

Pubmed

19121390    26354079    22118469    20566863    30249741    20798317    + More
24508170    21347285    21719571    18362917    19820115    24845553    23537049    29403074   

EMBL

BABH01039952    ODYU01009911    SOQ54646.1    KQ459053    KPJ04041.1    NWSH01000348    + More
PCG77177.1    KQ461073    KPJ09568.1    AGBW02008904    OWR52228.1    RSAL01000034    RVE51413.1    DS235366    EEB15309.1    KQ435733    KOX77286.1    KQ980724    KYN14049.1    QOIP01000010    RLU17376.1    GL438568    EFN68778.1    KK107790    EZA47771.1    KQ976755    KYN08564.1    KQ982625    KYQ53468.1    KQ414745    KOC61897.1    ADTU01006982    LBMM01008958    KMQ88508.1    KQ434809    KZC06683.1    GL453976    EFN75074.1    GL887707    EGI70268.1    ACPB03012012    ACPB03012013    KZ288209    PBC33003.1    PBC33002.1    KQ976731    KYM76230.1    KQ971372    EFA10523.1    NEVH01016945    PNF25036.1    KK852411    KDR24445.1    KQ763472    OAD55040.1    KB632161    ERL89254.1    PYGN01000811    PSN40459.1    APGK01043553    KB741015    ENN75308.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000007151    UP000283053    + More
UP000009046    UP000053105    UP000192223    UP000079169    UP000078492    UP000279307    UP000000311    UP000053097    UP000078542    UP000075809    UP000053825    UP000005205    UP000036403    UP000076502    UP000005203    UP000008237    UP000007755    UP000015103    UP000242457    UP000078540    UP000007266    UP000235965    UP000027135    UP000030742    UP000245037    UP000019118   

PRIDE

H9IZS6   

Pfam

PF07782   DC_STAMP        + More
PF03392   OS-D

Interpro

IPR012858   DC_STAMP-like        + More
IPR011011   Znf_FYVE_PHD       
IPR036682   OS_D_A10/PebIII_sf       
IPR005055   A10/PebIII       

SUPFAM

SSF57903   SSF57903        + More
SSF100910   SSF100910       

Gene 3D

1.10.2080.10    

ProteinModelPortal

H9IZS6   A0A2H1WNU5   A0A194QKQ9   A0A2A4JYT5   A0A194QVK6   A0A212FET7   + More
A0A3S2M5G5   E0VPK3   A0A0M9A671   A0A1W4XSW1   A0A3Q0IT30   A0A195DNH3   A0A3L8DAL2   E2ACN4   A0A026VW86   A0A151IQU4   A0A151X0B6   A0A0L7QTC8   A0A158P2L9   A0A0J7KDH5   A0A154P4B4   A0A088AL76   E2CAG3   F4W6D3   T1HLT9   A0A2A3EMH1   A0A2A3EP22   A0A195AW25   D6X0B8   A0A2J7Q8Y1   A0A067RUF8   A0A310S935   U4U5T4   A0A2P8Y877   N6TC46  

KEGG

101746709    K22375 E3 ubiquitin-protein ligase DCST1 [EC:2.3.2.27] | (RefSeq) DC-STAMP domain-containing protein

GO

GO:0016021   GO:0016874   GO:0006511   GO:0005515   GO:0003735   GO:0006412   GO:0015935   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

81

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.25151

Exp number, first 60 AAs:

12.25151

Total prob of N-in:

0.86956

POSSIBLE N-term signal

sequence

inside

1  -  81

 

 

Pi

159.419116

Theta

183.420375

Tajima's D

-0.411738

CLR

17.35479

CSRT

0.265736713164342

Interpretation

Uncertain