Gene

KWMTBOMO11272

Pre Gene Modal

BGIBMGA002761

Annotation

PREDICTED:_DC-STAMP_domain-containing_protein_1_[Bombyx_mori]

Location

Bomo_Chr19(+):2275296-2277780      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.353

CDS

ATGTACTGCGGTAAAGTTGGCCGTGGAGTACTGAAAGCTATAATATTGACTTATATTGTAGCCGGTCCGATCACTAACATGGGATTGAATGCTAAAGAGGTTGTAAGAGTGTTCGGTTGCAGCAATGAGTTAGCATACAATCTATCTACATATAAATACACGTTGTTAATGAACGTAATCAGAAAAACTGCATTGGATATGAACATTGAAGTGGATCGAGTCAAAGATAGTTTTAGGTATTTCAAAGTTGTCGCCAGACCTATAGAAAAGGAATTGGTAAAAACAAAAGAATTAGATATTGAGGAATACGATTATTTGGACTATATGTACGATCTCACTTCTAAGCCTGCTGATGGTTTTGTTCATGAGAACGGGAAATGTTAA

Protein

MYCGKVGRGVLKAIILTYIVAGPITNMGLNAKEVVRVFGCSNELAYNLSTYKYTLLMNVIRKTALDMNIEVDRVKDSFRYFKVVARPIEKELVKTKELDIEEYDYLDYMYDLTSKPADGFVHENGKC

Uniprot

H9IZS6   A0A2A4JYT5   A0A194QKQ9   A0A2H1WNU5   A0A194QVK6   A0A212FET7   + More
U4U5T4   D6X0B8   E0VPK3   A0A0M9A671   A0A067RUF8   K7J1D9   A0A232F1P8   A0A3Q0IT30   T1HLT9   A0A182IMI2   A0A1I8N8N6   A0A1B0AWL2   A0A1B6FDP0   A0A182KBE7   A0A084W152   A0A182T7D0   A0A1A9W580   J9KI33   A0A182WAL4   A0A182YQ08   A0A1A9V515   A0A182PFH5   A0A182LUT7   A0A1W4XSW1   W8AV87   A0A182R2L1   A0A1I8NW43   A0A182FEL5   A0A1B0BH84   A0A0K8V9A3   A0A182N7W5   A0A0K8WAL2   W8B5I3   W8AR45   W8AJ54   B0WAM1   A0A1S3H559   A0A1A9X9Z8   A0A182TDZ1   A0A182KW18   A0A182HMF7   A0A182V3B4   A0A182XD26   Q7Q7E7   V4A403   B7QFK8   A0A1S3IFY8   W4YHV3   W4XPQ4  

Pubmed

19121390    26354079    22118469    23537049    18362917    19820115    + More
20566863    24845553    20075255    28648823    25315136    24438588    25244985    24495485    20966253    12364791    14747013    17210077    23254933   

EMBL

BABH01039952    NWSH01000348    PCG77177.1    KQ459053    KPJ04041.1    ODYU01009911    + More
SOQ54646.1    KQ461073    KPJ09568.1    AGBW02008904    OWR52228.1    KB632161    ERL89254.1    KQ971372    EFA10523.1    DS235366    EEB15309.1    KQ435733    KOX77286.1    KK852411    KDR24445.1    NNAY01001210    OXU24726.1    ACPB03012012    ACPB03012013    JXJN01004812    GECZ01021464    JAS48305.1    ATLV01019208    KE525264    KFB43946.1    ABLF02031264    AXCM01000178    GAMC01018007    JAB88548.1    JXJN01014219    GDHF01016877    JAI35437.1    GDHF01031701    GDHF01023907    GDHF01004439    GDHF01000993    JAI20613.1    JAI28407.1    JAI47875.1    JAI51321.1    GAMC01018009    GAMC01018005    JAB88546.1    GAMC01018013    JAB88542.1    GAMC01018010    JAB88545.1    DS231873    EDS41575.1    APCN01004428    AAAB01008960    EAA11283.4    KB202544    ESO89720.1    ABJB010055564    ABJB010307077    ABJB010326616    ABJB010430901    ABJB010605439    ABJB010748771    ABJB010883392    ABJB010944745    DS926264    EEC17630.1    AAGJ04013565   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000030742    + More
UP000007266    UP000009046    UP000053105    UP000027135    UP000002358    UP000215335    UP000079169    UP000015103    UP000075880    UP000095301    UP000092460    UP000075881    UP000030765    UP000075901    UP000091820    UP000007819    UP000075920    UP000076408    UP000078200    UP000075885    UP000075883    UP000192223    UP000075900    UP000095300    UP000069272    UP000075884    UP000002320    UP000085678    UP000092443    UP000075902    UP000075882    UP000075840    UP000075903    UP000076407    UP000007062    UP000030746    UP000001555    UP000007110   

PRIDE

H9IZS6   

Pfam

PF07782   DC_STAMP        + More
PF02460   Patched
PF03392   OS-D
PF04500   FLYWCH

Interpro

IPR012858   DC_STAMP-like        + More
IPR000731   SSD       
IPR003392   Ptc/Disp       
IPR036682   OS_D_A10/PebIII_sf       
IPR005055   A10/PebIII       
IPR011011   Znf_FYVE_PHD       
IPR007588   Znf_FLYWCH       
IPR000859   CUB_dom       
IPR035914   Sperma_CUB_dom_sf       
IPR036028   SH3-like_dom_sf       
IPR001452   SH3_domain       

SUPFAM

SSF100910   SSF100910        + More
SSF57903   SSF57903       
SSF49854   SSF49854       
SSF50044   SSF50044       

Gene 3D

1.10.2080.10     2.60.120.290    

ProteinModelPortal

H9IZS6   A0A2A4JYT5   A0A194QKQ9   A0A2H1WNU5   A0A194QVK6   A0A212FET7   + More
U4U5T4   D6X0B8   E0VPK3   A0A0M9A671   A0A067RUF8   K7J1D9   A0A232F1P8   A0A3Q0IT30   T1HLT9   A0A182IMI2   A0A1I8N8N6   A0A1B0AWL2   A0A1B6FDP0   A0A182KBE7   A0A084W152   A0A182T7D0   A0A1A9W580   J9KI33   A0A182WAL4   A0A182YQ08   A0A1A9V515   A0A182PFH5   A0A182LUT7   A0A1W4XSW1   W8AV87   A0A182R2L1   A0A1I8NW43   A0A182FEL5   A0A1B0BH84   A0A0K8V9A3   A0A182N7W5   A0A0K8WAL2   W8B5I3   W8AR45   W8AJ54   B0WAM1   A0A1S3H559   A0A1A9X9Z8   A0A182TDZ1   A0A182KW18   A0A182HMF7   A0A182V3B4   A0A182XD26   Q7Q7E7   V4A403   B7QFK8   A0A1S3IFY8   W4YHV3   W4XPQ4  

KEGG

101746709    K22375 E3 ubiquitin-protein ligase DCST1 [EC:2.3.2.27] | (RefSeq) DC-STAMP domain-containing protein

GO

GO:0016021   GO:0016874  

Length:

127

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

14.51944

Exp number, first 60 AAs:

14.50722

Total prob of N-in:

0.65114

POSSIBLE N-term signal

sequence

outside

1  -  127

 

 

Pi

307.925671

Theta

183.888679

Tajima's D

2.437311

CLR

0.479688

CSRT

0.937353132343383

Interpretation

Uncertain