Gene

KWMTBOMO11271  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002759

Annotation

PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_14_[Papilio_polytes]

Location

Bomo_Chr19(+):2259656-2272963      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.173 Nuclear   Reliability : 1.674

CDS

ATGCCTAACGTTTCAGTGAAGGTAAAATGGGGCAAGGAAATGTACCCAGACGTGGAGGTGAATACAGACGATGAACCGGTACTGTTCAAGGCGCAGATATTTGCACTGACAGGGGTCCAGCCAGAGAGACAAAAAGTCGTTTGCAAAGGAGTCACATTACGGGATGACACATGGGGCAATTTTAAATTGACGAATAACGCCTTAGTACTTGTCATGGGCAGTAAAGAGGAAGACGTGCCAGCAGCACCAGTGGAACAGACACGTTTTGTCGAAGACATGAATGAAGCTGAACTGGCTACAGCCATGGATATGCCAGAGGGTCTCATCAACTTGGGTAACACTTGTTACATGAATGCGACAGTGCAGTGTCTGAAGACGGTCCCTGAACTTAGAAATGCCTTGCTCAATTATGATAAATCATCAACGGGCGGCGACACAGCGGGAGAACTAACGGCGGCACTAAGCGAGACGGTCTCGGCCCTGGACTCCGGGGGCTCCAGCGCGTGCGGCGTGGCGGCGGCGCGCCTGCTGGGAGCCCTGCACGGCGCGGCGCCTCGCTTCGCGGAGCGGGCGGCCGCGGGGGGCTTCGCGCAGCAGGACGCCTCCGAGTGCTGGACCGAAATCGTGAGGGCGTTGCAGCAGAGGCTCCCGGCCGCACCCATGCCAGATAAGAACGCGACAAGGGCATCAGTGATCGAGCAATACTTCGGAGGTACCCTGGATGTGGAGCTTGTATGCTCAGAGGCTGATGAGCCCCCGACCCACTCTGAGGAGTCATTCCTCCAGTTGTCCTGTTTCATATCACAAGACGTCAAATATCTGCAGTCTGGACTTAGATCTAAAATGGCTGAGCATATAACAAAGATGTCACAAACACTGGGCAGGGATGCTGTGTACACAAAAACTAGTAAAATAAGCCGTCTGCCTGCTTATTTGACAGTGCAATTCGTTCGTTTCTACTACAAGGAGAAAGAATCTATCAACGCTAAAATACTAAAAGATGTTAAATTCCCTCTGGACTTGGACGTGTATGAACTTTGCACACCGGAACTACAAGAGAGGCTGACACCGATGCGAAATAAATTCAAGGAGTTGGAAGATGCGAAAGTACAATCATCGCTTAGCTCCGGTAACAAGAGTCACGGGGACAGCAGCAAGGCCAAGAAGAAGCGTGTCTTGCCCTACTGGTTCGAAAACGACGTAGGCAGCAACAACAGCGGCTACTACCGGCTGCAGGCCGTGCTCACGCACCGCGGCCGCTCGTCCTCCTCCGGGCACTACGTGGCGTGGGTGGCGCGCGGCGCGGGCTGGCTGCGCTGCGACGACGACACCGTCACCCCCGTCACCGAGGACGAGGTGCTCAAGCTCAGCGGGGGAGGTGACTGGCACTGCGCCTACCTTCTGCTGTACGGACCTAAAATCCTGGAGCTCCCCGAGCAGGATGAGGACGAGCCCATGGTCACGGACATAACAGACGATCCTGCTGGGGAACCCCCCACAGCGCTCGCATAA

Protein

MPNVSVKVKWGKEMYPDVEVNTDDEPVLFKAQIFALTGVQPERQKVVCKGVTLRDDTWGNFKLTNNALVLVMGSKEEDVPAAPVEQTRFVEDMNEAELATAMDMPEGLINLGNTCYMNATVQCLKTVPELRNALLNYDKSSTGGDTAGELTAALSETVSALDSGGSSACGVAAARLLGALHGAAPRFAERAAAGGFAQQDASECWTEIVRALQQRLPAAPMPDKNATRASVIEQYFGGTLDVELVCSEADEPPTHSEESFLQLSCFISQDVKYLQSGLRSKMAEHITKMSQTLGRDAVYTKTSKISRLPAYLTVQFVRFYYKEKESINAKILKDVKFPLDLDVYELCTPELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKKRVLPYWFENDVGSNNSGYYRLQAVLTHRGRSSSSGHYVAWVARGAGWLRCDDDTVTPVTEDEVLKLSGGGDWHCAYLLLYGPKILELPEQDEDEPMVTDITDDPAGEPPTALA

Similarity

Belongs to the peptidase C19 family.

Uniprot

A0A194QGF7   A0A2H1WNJ8   H9IZS4   A0A194QW90   D6WPP3   A0A1B6EH15   + More
A0A1Y1MW02   E2BDN2   A0A1B6GDA5   A0A1B6CDA9   A0A087ZQN5   A0A0L7QXV5   A0A1W4X482   A0A2A3E461   U4UIN8   A0A154PAW0   J3JZF1   A0A2J7QET0   E9J3G3   F4WPY4   A0A0N0U6N3   A0A3L8DAW3   A0A2J7QER1   A0A151JU35   A0A0C9R6V4   A0A151J194   A0A151HYU3   A0A151WGX3   A0A232FAQ5   K7IZG1   A0A0N8E077   E9H1J0   A0A026WAW6   A0A0P6AB63   A0A0P6IKD3   A0A182VAE0   A0A2L2Y6Q4   A0A182Q9F0   A0A1B6LZN6   U5EZI9   J9JTF1   A0A2M4BKR3   A0A1S4FQW4   A0A2H8TGA1   A0A087TJS9   A0A1S4H1L1   T1IX76   A0A2M4ADJ1   T1E8N2   A0A2S2P739   Q7QGE8   A0A2M4CSG8   V9IKQ5   E0VQI8   A0A0N7Z981   A0A2R5LJH8   A0A3S3RZB5   V4ALX1   A0A336K563   W8BWE7   A0A069DUM5   A0A0A1XK47   T1IFE6   A0A0P5CEX1   A0A0L0BQE2   Q29NI2   B4G7H7   A0A1Q3FVI4   A0A1S4EF74   A0A293MSB2   A0A034WU48   A0A224XNG6   A0A3B0JMS0   B4KJF9   A0A0V0G683   A0A3M6TW59   A0A0M4EC75   B4NZ95   B4Q8T6   Q9VKZ8   B4HWK5   B4LR09   A0A0K8U1E3   B3N970   V5HHU1   A0A1I8PCJ9   A0A131XU62   B3MPR0   L7M340   A0A1W4UUS3   A0A023F4P6   A0A0P4VVM3   B4JPP8   A0A1I8MRJ9   A0A1B0A536   A0A224Z2W2   A0A131YZR6   T1PCQ4   A0A1A9V9I6   D3TQ68  

Pubmed

26354079    19121390    18362917    19820115    28004739    20798317    + More
23537049    22516182    21282665    21719571    30249741    28648823    20075255    21292972    24508170    26561354    12364791    20566863    27129103    23254933    24495485    26334808    25830018    26108605    15632085    17994087    25348373    30382153    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25765539    25576852    25474469    25315136    28797301    26830274    20353571   

EMBL

KQ459053    KPJ04040.1    ODYU01009911    SOQ54645.1    BABH01039951    BABH01039952    + More
KQ461073    KPJ09569.1    KQ971354    EFA06193.1    GEDC01000107    JAS37191.1    GEZM01022944    JAV88645.1    GL447678    EFN86194.1    GECZ01009337    JAS60432.1    GEDC01025861    JAS11437.1    KQ414699    KOC63450.1    KZ288386    PBC26480.1    KB632319    ERL92273.1    KQ434846    KZC08320.1    APGK01045645    BT128633    KB741037    AEE63590.1    ENN74687.1    NEVH01015306    PNF27077.1    GL768066    EFZ12593.1    GL888258    EGI63735.1    KQ435724    KOX78344.1    QOIP01000010    RLU17451.1    PNF27078.1    KQ981829    KYN35072.1    GBYB01012064    JAG81831.1    KQ980541    KYN15590.1    KQ976717    KYM76785.1    KQ983140    KYQ47074.1    NNAY01000510    OXU27924.1    GDIQ01074652    LRGB01000024    JAN20085.1    KZS21373.1    GL732583    EFX74497.1    KK107348    EZA52154.1    GDIP01033149    JAM70566.1    GDIQ01009631    JAN85106.1    IAAA01003043    IAAA01003044    LAA02825.1    AXCN02000845    GEBQ01010831    JAT29146.1    GANO01000714    JAB59157.1    ABLF02040831    GGFJ01004471    MBW53612.1    GFXV01001265    MBW13070.1    KK115530    KFM65368.1    AAAB01008835    JH431644    GGFK01005471    MBW38792.1    GAMD01002613    JAA98977.1    GGMR01012650    MBY25269.1    EAA05748.4    GGFL01004114    MBW68292.1    JR052538    AEY61718.1    DS235430    EEB15644.1    GDKW01001283    JAI55312.1    GGLE01005574    MBY09700.1    NCKU01003779    NCKU01002879    NCKU01002874    RWS06929.1    RWS08623.1    RWS08633.1    KB199650    ESP05184.1    UFQS01000111    UFQT01000111    SSW99799.1    SSX20179.1    GAMC01000905    JAC05651.1    GBGD01001239    JAC87650.1    GBXI01003042    JAD11250.1    ACPB03001633    GDIP01171335    JAJ52067.1    JRES01001517    KNC22305.1    CH379059    EAL34238.3    CH479180    EDW28377.1    GFDL01003480    JAV31565.1    GFWV01018996    MAA43724.1    GAKP01001649    JAC57303.1    GFTR01006733    JAW09693.1    OUUW01000006    SPP81622.1    CH933807    EDW13539.1    GECL01002607    JAP03517.1    RCHS01002807    RMX45643.1    CP012523    ALC39185.1    CM000157    EDW88790.1    CM000361    CM002910    EDX04501.1    KMY89484.1    AE014134    BT031279    AAF52908.1    ABY20520.1    AGB92856.1    CH480818    EDW52400.1    CH940649    EDW64548.1    GDHF01031981    JAI20333.1    CH954177    EDV58505.1    GANP01001228    JAB83240.1    GEFM01006610    JAP69186.1    CH902620    EDV32308.1    GACK01006752    JAA58282.1    GBBI01002768    JAC15944.1    GDRN01110638    JAI56875.1    CH916372    EDV98878.1    GFPF01013052    MAA24198.1    GEDV01004060    JAP84497.1    KA646459    AFP61088.1    CCAG010004816    EZ423570    ADD19846.1   

Proteomes

UP000053268    UP000005204    UP000053240    UP000007266    UP000008237    UP000005203    + More
UP000053825    UP000192223    UP000242457    UP000030742    UP000076502    UP000019118    UP000235965    UP000007755    UP000053105    UP000279307    UP000078541    UP000078492    UP000078540    UP000075809    UP000215335    UP000002358    UP000076858    UP000000305    UP000053097    UP000075903    UP000075886    UP000007819    UP000054359    UP000007062    UP000009046    UP000285301    UP000030746    UP000015103    UP000037069    UP000001819    UP000008744    UP000079169    UP000268350    UP000009192    UP000275408    UP000092553    UP000002282    UP000000304    UP000000803    UP000001292    UP000008792    UP000008711    UP000095300    UP000007801    UP000192221    UP000001070    UP000095301    UP000092445    UP000078200    UP000092444   

PRIDE

H9IZS4    Q9VKZ8    V5HHU1    L7M340   

Pfam

PF00443   UCH        + More
PF00240   ubiquitin

Interpro

IPR038765   Papain-like_cys_pep_sf        + More
IPR018200   USP_CS       
IPR001394   Peptidase_C19_UCH       
IPR029071   Ubiquitin-like_domsf       
IPR028889   USP_dom       
IPR000626   Ubiquitin_dom       
IPR019954   Ubiquitin_CS       

SUPFAM

SSF54001   SSF54001        + More
SSF54236   SSF54236       

ProteinModelPortal

A0A194QGF7   A0A2H1WNJ8   H9IZS4   A0A194QW90   D6WPP3   A0A1B6EH15   + More
A0A1Y1MW02   E2BDN2   A0A1B6GDA5   A0A1B6CDA9   A0A087ZQN5   A0A0L7QXV5   A0A1W4X482   A0A2A3E461   U4UIN8   A0A154PAW0   J3JZF1   A0A2J7QET0   E9J3G3   F4WPY4   A0A0N0U6N3   A0A3L8DAW3   A0A2J7QER1   A0A151JU35   A0A0C9R6V4   A0A151J194   A0A151HYU3   A0A151WGX3   A0A232FAQ5   K7IZG1   A0A0N8E077   E9H1J0   A0A026WAW6   A0A0P6AB63   A0A0P6IKD3   A0A182VAE0   A0A2L2Y6Q4   A0A182Q9F0   A0A1B6LZN6   U5EZI9   J9JTF1   A0A2M4BKR3   A0A1S4FQW4   A0A2H8TGA1   A0A087TJS9   A0A1S4H1L1   T1IX76   A0A2M4ADJ1   T1E8N2   A0A2S2P739   Q7QGE8   A0A2M4CSG8   V9IKQ5   E0VQI8   A0A0N7Z981   A0A2R5LJH8   A0A3S3RZB5   V4ALX1   A0A336K563   W8BWE7   A0A069DUM5   A0A0A1XK47   T1IFE6   A0A0P5CEX1   A0A0L0BQE2   Q29NI2   B4G7H7   A0A1Q3FVI4   A0A1S4EF74   A0A293MSB2   A0A034WU48   A0A224XNG6   A0A3B0JMS0   B4KJF9   A0A0V0G683   A0A3M6TW59   A0A0M4EC75   B4NZ95   B4Q8T6   Q9VKZ8   B4HWK5   B4LR09   A0A0K8U1E3   B3N970   V5HHU1   A0A1I8PCJ9   A0A131XU62   B3MPR0   L7M340   A0A1W4UUS3   A0A023F4P6   A0A0P4VVM3   B4JPP8   A0A1I8MRJ9   A0A1B0A536   A0A224Z2W2   A0A131YZR6   T1PCQ4   A0A1A9V9I6   D3TQ68  

PDB

5GJQ     E-value=7.10223e-128,     Score=1172

KEGG

101744178    K11843 ubiquitin carboxyl-terminal hydrolase 14 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-termina

GO

GO:0006511   GO:0036459   GO:0016579   GO:0016021   GO:0016787   GO:0016567   GO:0005829   GO:0005654   GO:0008063   GO:0004843   GO:0007623   GO:0016740   GO:0005515   GO:0003735   GO:0006412   GO:0015935   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

503

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00237

Exp number, first 60 AAs:

3e-05

Total prob of N-in:

0.00401

outside

1  -  503

 

 

Pi

185.281627

Theta

148.46656

Tajima's D

-1.000394

CLR

1096.013158

CSRT

0.138243087845608

Interpretation

Uncertain