SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11269  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012651
Annotation
PREDICTED:_uncharacterized_protein_LOC106139693_isoform_X1_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.242 Mitochondrial   Reliability : 1.494
 

Sequence

CDS
ATGTCTTTGAAGAATAGGTTAATTGCATGTCTACAAAAACTAAAGGAATACGATTACACTGACGTAGACAAGGCAAGAGCTAGTGACGCGAAGGCCGAGAATGCCCTCAACTTAATATACCAGACCGCTTTAAAGAAAACAACTTTTACAACAGAAGAGAAGAAAATTGTAGGTTCTCTTTTATTTGATGCCATCACACCGATACAAAGCAACATAGAAGGAACGCTCTGCGAATACAGAACTAGATTAGATACCTCTGTGCTTATGAAAAGATCTGCAATACAATTCTTGATTGACGAATACGGGAAGTTTCCAGTTGAGAATTCTATCTTGGCTACAAAGTTAGAGGAAGCCGGCATAGCAGAGAGCGTTGAAATACTCAATGAAATTATAAATAGGACATCGGCGGTCCTAGCAGGAGGAGCAGTTGGATGCCTCGCAGGACCGGCAGGAGCTGCATTGGGAGGCGTATACGGAGGCATGATTACAGACGGCTTGGTTTCTGCGGCTAAGAACGAGCCTGTAGGTATTTTTGAGTCAAGTGCAAATATAGGTAGAGACATTGCTTCAGGCAAAAATCCAATGGCTTCTGTGGGTTCCGCAAGTTTCAAAATCGCCATGGACGGTATAGGTGGCTTTGGCATGGGAGGAGTTTCTAGCGTTGCCAGTAAAGTCCCGGCGAAGGCCGTCGCAAAAACCATAGAAGGCACTGTAAAAAAAGCTGCTGCAACTATTGGGGAGGAGATGATTGAGAAGTCAGTGCAATTAACTGCAGAAGAAATGACAAAAATTGTGGCAAAGAAAGTGTCAGAAAAAGCCGTGAAAAAAGCTGTAGAAACTGCAGCAATACAAACACAAATGCTTCTGGTATCTGCGCACGTCGGAGTAAATGCTAGTGAAAAAACCAAAGCTGAAATGCGTGCTGAAGAAGAACGTAAACAACAGAAACAAAAAGAAGAAGAAAAAAAGGCGCGTGAAAATGGCGATAAAAAAAATACTGGATCGTGGCAACCACCACGCGAGAACAGAAACAATAAAGAGTCCAATGTTGATAATGAAGAGTCCGACGAGGAGGTATTTGAAAAGTTCATGAAATTACTTAAACAGCTCTTGAAGCTTCTCTACGGCAATAACAGCGAACCGTTCACAAGAATTTTCGAGAATTTATCACCAGGCCAAATAGCGTATTTGGTGAAAATAATCAGAAACCTTAACTCAACTGGAATTTTACAGATAGTGTTAGATTTTACATTAAAACTGTTTAAATTGTACTTTTCTAAAGATATCTCATTCACAAATATCCTGAGTATGTTAGAATTCGTCGCAACTTACATTGAAGACCAGTTGTATTTTATGACCAAAACCAAAGGTAAGCCGACTCGTCAATCAGATGCCGACCGAAATGAGCGTCGAAGGAACGCCATCAAAGAACTTCAAAACAAAAGGGATATAATTCAGAAAATTGCTGATCTATTCAGACATTTACAAGCGGAAATCATAGCTGAAACGAGCGCGCCTAATATAATTTCCCCCTATTTTCGTGATATATTCGCAGCTGTGTATCATTATTACAAACACAGACGCGTGCCCGTGCCAGGCCATGAGAAGCTGACAGTCAAACAATATTTCGACTTGATAAGGATGGTAATTATAAAAATGAAAGAATCACCGGAATACAAAAAAATGCAGAGGGCCAGAAATGGAACGACCCTCACTTGTGAAATGTACGTGGTCTTGTTCGGTAGGATGTTCAGAATTATTATTACTGTTCGAGATGGTGAAATTGTATTGAGTACCGCCTATGTAGTCAAGCGTATGAACTTTAATGCCAAAGAAGGCATTCTTTACATAAAATTCGATGACGGAGATGTACAGCAGTAA
Protein
MSLKNRLIACLQKLKEYDYTDVDKARASDAKAENALNLIYQTALKKTTFTTEEKKIVGSLLFDAITPIQSNIEGTLCEYRTRLDTSVLMKRSAIQFLIDEYGKFPVENSILATKLEEAGIAESVEILNEIINRTSAVLAGGAVGCLAGPAGAALGGVYGGMITDGLVSAAKNEPVGIFESSANIGRDIASGKNPMASVGSASFKIAMDGIGGFGMGGVSSVASKVPAKAVAKTIEGTVKKAAATIGEEMIEKSVQLTAEEMTKIVAKKVSEKAVKKAVETAAIQTQMLLVSAHVGVNASEKTKAEMRAEEERKQQKQKEEEKKARENGDKKNTGSWQPPRENRNNKESNVDNEESDEEVFEKFMKLLKQLLKLLYGNNSEPFTRIFENLSPGQIAYLVKIIRNLNSTGILQIVLDFTLKLFKLYFSKDISFTNILSMLEFVATYIEDQLYFMTKTKGKPTRQSDADRNERRRNAIKELQNKRDIIQKIADLFRHLQAEIIAETSAPNIISPYFRDIFAAVYHYYKHRRVPVPGHEKLTVKQYFDLIRMVIIKMKESPEYKKMQRARNGTTLTCEMYVVLFGRMFRIIITVRDGEIVLSTAYVVKRMNFNAKEGILYIKFDDGDVQQ

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
626
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.47325
Exp number, first 60 AAs:
0.00036
Total prob of N-in:
0.48061
outside
1  -  626
 
 

Population Genetic Test Statistics

Pi
86.599636
Theta
143.163617
Tajima's D
-1.0894
CLR
40.511258
CSRT
0.119094045297735
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
31250652 AKIIITFQRYYVNDSFYDFKNQGPVFLMIGGEGPADARWMVTGTWINYAKKFNALCINLEHRFYGESHPTL 99.14 0.0
28556443 SAIQFLIDEYGK 100.00 3e-09
28556443 EYDYTDVDK 100.00 7e-05
26280517 NDPVVITDFHDGPGWK 100.00 7e-04
28556443 IAMDGIGGFGMGGVSSVASK 100.00 7e-04
28556443 IAMDGIGGFGMGGVSSVASK 100.00 7e-04
28556443 LDTSVLMK 100.00 0.011
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