SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11262
Pre Gene Modal
BGIBMGA004840
Annotation
PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.634
 

Sequence

CDS
ATGAGGCACGTGTACGGTGATCACGTACACTGCGTCAGCCCCGCCTGTCGACGCGACAATACTGAGTACCTCCCACGACCTTCTCGACTGCGCCCTGTCGATGATTACAGACTGACTCCAACGTACGGCCTGGTGCTGGCGACGATCTCCACGCTGGGCCGGCACGCGGGCGCCGGTCCGCTGTGGGGGCTCGTGGTCGGCAGCGAGGCGGCCGCCTGCCGTCGCTACTGGTGGGCGCATCTACTTTACATCAACAACTACATCTACGAAGACGCATTCTGTGCACCGCAGACTTGGTACCTGGCAGCGGACACGCAGCTGTTCTGTGTGGGCGTGGCGGTGTGCGTGTGTGCTCGCCGGCCGCGTGCCCGCGCGGTGTGCCTGGCGGTGCTGCTCCTCCTCTCGCTGCTGACTCCGGCACTGCACACGTACTTGCAACACCTGGACGCCGTCGTCCTGCAGTCTCCCGAGACATACAGGAACCTCTACGAGCGCGAGGACACGTTCCGGCTGCTGTACATCCGCGGTCACACCAACCTCTCCACGTACACGCTGGGGCTGGCGGGCGGCTTCTTGGCCTACCGCGCCCAGACTCAGCCTCAACGTTTCACTGGATACAAGAAGCACCGCTGGCTGGTGTGGCTGCTGCTCCCGCTGGGCGTGGCGGTGATCCTGTCGGGAGGTATATTCTACAGGGACGGCGTGGAGCCCCCGACAGCGCTCAGAGTGATGTACGCTGCACTCTACAAACCTATTTTCCAGCTGCTCGTCGTCGCTCTGATCTTGTCTTGCGTTTTGAAGCTGGAAAACAGCTACCGCGCGGTGGTGGAGTGGCGCGGCTGGGGCTGGAGCGGCCGGGTGTCGTTCAGCGCGTTCCTGCTGCACACGCTGTTCCAGCGCGGGCTCGTCGGCTCGCAGACCGCGCCGCTGCACATCTCCGACTACTACGTCACCAAGCCAGCCCGGCGCAGGATTAAGCTGCGACAGCTCGTTATGCCATACAGCCGACGGCACTTCTTAATGAAGGATGAAGGAGCATTGTCCCTGGATTAA
Protein
MRHVYGDHVHCVSPACRRDNTEYLPRPSRLRPVDDYRLTPTYGLVLATISTLGRHAGAGPLWGLVVGSEAAACRRYWWAHLLYINNYIYEDAFCAPQTWYLAADTQLFCVGVAVCVCARRPRARAVCLAVLLLLSLLTPALHTYLQHLDAVVLQSPETYRNLYEREDTFRLLYIRGHTNLSTYTLGLAGGFLAYRAQTQPQRFTGYKKHRWLVWLLLPLGVAVILSGGIFYRDGVEPPTALRVMYAALYKPIFQLLVVALILSCVLKLENSYRAVVEWRGWGWSGRVSFSAFLLHTLFQRGLVGSQTAPLHISDYYVTKPARRRIKLRQLVMPYSRRHFLMKDEGALSLD

Summary

Catalytic Activity
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.
EMBL
NWSH01001667    PCG70472.1    ODYU01007420    SOQ50170.1    KZ150068    PZC74094.1    + More
RSAL01000205    RVE44373.1    AGBW02013856    OWR42649.1    AGBW02012502    OWR44975.1    KQ459449    KPJ00879.1    KQ461184    KPJ07529.1    KQ459053    KPJ04119.1    SOQ50173.1    JTDY01000850    KOB75675.1    SOQ50171.1    AGBW02015045    OWR40663.1    PZC74095.1    KPJ04014.1    KPJ04118.1    KZ150085    PZC73777.1    AGBW02013474    OWR43366.1    KPJ04116.1    JTDY01004025    KOB68697.1    NWSH01001633    PCG70632.1    KPJ07535.1    KPJ07525.1    KPJ04120.1    KPJ00884.1    BABH01038834    JTDY01010055    KOB61492.1    CH940662    EDW58809.2    PYGN01000196    PSN51492.1    KPJ04127.1    CP012524    ALC41555.1    NEVH01017478    PNF24171.1    CH963846    EDW72357.2    ADMH02001404    ETN62656.1    CH902619    EDV36810.2    ODYU01009435    SOQ53859.1    GGMS01004866    MBY74069.1    GEZM01074205    GEZM01074204    JAV64641.1    JRES01000204    KNC33314.1    PCG70475.1    OUUW01000001    SPP73054.1    AAAB01008807    EAA03947.5    AGBW02008687    OWR52781.1    NWSH01000045    PCG80260.1    SOQ50174.1    KQ459582    KPI98974.1    DS232017    EDS32007.1    KQ461073    KPJ09497.1    GEBQ01030520    JAT09457.1    ATLV01023205    KE525341    KFB48584.1    ABLF02022069    APCN01000152    CH477771    EAT36390.1    AXCM01005440    CH480816    EDW46669.1    GECU01029990    GECU01001596    JAS77716.1    JAT06111.1    CM000362    EDX05929.1    CM002911    KMY91834.1    AE013599    AAF57404.4    KPI98970.1    JXUM01022803    JXUM01022804    KQ560642    KXJ81468.1    CM000157    EDW89100.1    CH478064    EAT34133.1    KRJ98190.1    GEZM01096343    JAV54967.1    DS235172    EEB12971.1    EDO64708.1    LJIG01016315    KRT80969.1    ATLV01023204    KFB48580.1    CH954177    EDV59773.2    PYGN01000071    PSN55352.1    GEZM01096346    JAV54965.1    GEZM01096332    JAV54980.1    GEZM01096331    JAV54981.1    GEZM01096342    JAV54968.1   
Pfam
PF01757   Acyl_transf_3        + More
PF02958   EcKinase
PF00348   polyprenyl_synt
PF04488   Gly_transf_sug
PF00632   HECT
PF00397   WW
PF00168   C2
Interpro
IPR002656   Acyl_transf_3        + More
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       
IPR015897   CHK_kinase-like       
IPR008949   Isoprenoid_synthase_dom_sf       
IPR000092   Polyprenyl_synt       
IPR007577   GlycoTrfase_DXD_sugar-bd_CS       
IPR000569   HECT_dom       
IPR035983   Hect_E3_ubiquitin_ligase       
IPR035892   C2_domain_sf       
IPR036020   WW_dom_sf       
IPR001202   WW_dom       
IPR000008   C2_dom       
IPR006621   Nose-resist-to-fluoxetine_N       
SUPFAM
SSF56112   SSF56112        + More
SSF48576   SSF48576       
SSF56204   SSF56204       
SSF51045   SSF51045       
Gene 3D

Ontologies

Topology

Length:
350
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
99.77182
Exp number, first 60 AAs:
5.18549
Total prob of N-in:
0.65801
inside
1  -  125
TMhelix
126  -  145
outside
146  -  171
TMhelix
172  -  194
inside
195  -  210
TMhelix
211  -  229
outside
230  -  243
TMhelix
244  -  266
inside
267  -  350
 
 

Population Genetic Test Statistics

Pi
214.317291
Theta
193.013664
Tajima's D
0.391286
CLR
0.100858
CSRT
0.47737613119344
Interpretation
Uncertain
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