SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11260
Annotation
glutathione_S-transferase_14?_partial_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.058 Nuclear   Reliability : 1.197 PlasmaMembrane   Reliability : 1.108
 

Sequence

CDS
ATGATGACTCGCAGCATCAAATTCACAGCTTCACAAGTAAATTCGGCGAAGAAACCTCCCATACTCTACGGAGATGAAGTATCTCCGCCCGTGAGATTTGTGATGATGACAGCAGCGCACCTCAACATTCAGTTGGATTTCCACCCAATTGATCTCTTTAAGTCTGAACACAAAATGGACGCTTTTAATCAGATTAATCCACTTCAAAAGGTGCCAGTGTTGAAAGTTGATAAAGATGTGATCTGTGACAGTCACGCTATTGCAATGTACCTTTGTGAAACTACTAAATCTGAAGATTTGTATCCAGGAAGTGCTTTGGCCAGGGCAAAAATAAATCAAATGCTTTTCTACAATGCGACAACTTTATTTCCAATTGACAGTTTCATACTTTCTGAATATTTTTGTGGAAAAATGCCATCTGGAGTTAAAGTTGATGAATGGTTTAATTCTCTGCATTACCTAAATACAGCTCTGTCGGTTTCTCCATGGCTCGCTGGAGATCAGATGAGGATTTGCGACTTTTGCTGTGCTTCCACCATTAGTTCCATGGAGACGGTCGTTAATGGAATCAAGAAATTTGTTTACTTGAAGAGGTGGATGGATGAATTGGAAAAACTACCTTGTTTTGAAATCAACAGACGTGGCTTAGAGCGATTGAAATATTTTATGAGTCTTTACAAGCCAAACTAA
Protein
MMTRSIKFTASQVNSAKKPPILYGDEVSPPVRFVMMTAAHLNIQLDFHPIDLFKSEHKMDAFNQINPLQKVPVLKVDKDVICDSHAIAMYLCETTKSEDLYPGSALARAKINQMLFYNATTLFPIDSFILSEYFCGKMPSGVKVDEWFNSLHYLNTALSVSPWLAGDQMRICDFCCASTISSMETVVNGIKKFVYLKRWMDELEKLPCFEINRRGLERLKYFMSLYKPN

Summary

Similarity
Belongs to the GST superfamily.
EMBL
EU216545    ABY66602.1    KZ149965    PZC76185.1    NWSH01000613    PCG75296.1    + More
MH177595    AYM01167.1    RSAL01000455    RVE41652.1    JTDY01000131    KOB78695.1    KM099184    AIL29314.1    KF929206    AHW45904.1    ODYU01002684    SOQ40499.1    KQ461184    KPJ07532.1    AK401893    BAM18515.1    KQ459449    KPJ00876.1    AGBW02010741    OWR47941.1    CH933816    EDW17223.2    EDW17222.1    CM000158    EDW91642.1    UFQS01001849    UFQT01001849    SSX12555.1    SSX31998.1    EDW91639.1    CH480816    EDW48450.1    UFQT01000238    SSX22201.1    CH954179    EDV55072.1    CAQQ02019672    AE013599    AY071644    AAF57700.1    AAL49266.1    LJIG01009495    KRT82966.1    CM002911    KMY94817.1    EDV55074.1    CH940647    EDW68745.1    GDAI01002240    JAI15363.1    EDW48453.1    CH933807    EDW12554.1    OUUW01000001    SPP75876.1    KF733214    AHH02320.1    EDV55071.1    CM000362    EDX07667.1    KMY94820.1    KF733189    AHH02254.1    HQ418398    AEJ87232.1    AY070254    AAAB01008984    AAL59653.1    EAA43410.1    KF733197    AHH02278.1    CH902619    EDV36032.1    KF733200    AHH02287.1    KF733190    KF733201    KF733202    KF733203    KF733204    KF733205    KF733206    KF733207    AHH02257.1    AHH02290.1    AHH02293.1    AHH02296.1    AHH02299.1    AHH02302.1    AHH02305.1    AHH02308.1    KF733195    KF733198    AHH02272.1    AHH02281.1    APCN01003837    KF733188    KF733191    KF733192    KF733193    KF733194    KF733199    AHH02251.1    AHH02260.1    AHH02263.1    AHH02266.1    AHH02269.1    AHH02284.1    KF733213    AHH02319.1    KJ868741    AIL23542.1    AY231720    AAR09743.1    CH479183    EDW36391.1    GBXI01014162    JAD00130.1    KF733208    AHH02311.1    JRES01000655    KNC29542.1    KF733196    AHH02275.1    CAQQ02196866    GANO01002595    JAB57276.1    CM000071    EAL25887.2    ADMH02001962    ETN60212.1    EDW36392.1    KF733187    KF733211    AHH02248.1    AHH02317.1    GANO01000594    JAB59277.1    CP012525    ALC44418.1    KF733209    AHH02314.1    EDV36036.1    EAL25886.2    CH916366    EDV95927.1    GGFJ01009174    MBW58315.1    KQ971319    KYB28851.1    AXCP01008582    GBXI01009289    JAD05003.1    HQ418410    AEJ87244.1    GAMC01008536    JAB98019.1    KQ971311    EEZ98839.1    EDV36039.1    EDV36038.1    AXCN02000116    KJ868740    AIL23541.1    KR107238    ALF04573.1    CCAG010018997    CH916372    EDV98898.1    SPP75877.1    KMY94816.1    CH964282    EDW85738.1    JRES01001005    KNC26194.1    AXCN02000826    GBXI01000558    JAD13734.1    GAPW01004097    JAC09501.1    GAMC01004854    GAMC01004851    JAC01702.1   
Pfam
PF13417   GST_N_3        + More
PF00043   GST_C
PF02798   GST_N
PF12763   EF-hand_4
PF14497   GST_C_3
Interpro
IPR004045   Glutathione_S-Trfase_N        + More
IPR040079   Glutathione_S-Trfase       
IPR010987   Glutathione-S-Trfase_C-like       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR036249   Thioredoxin-like_sf       
IPR004046   GST_C       
IPR000261   EH_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
SUPFAM
SSF47616   SSF47616        + More
SSF52833   SSF52833       
SSF47473   SSF47473       
PDB
4PNG     E-value=1.25178e-21,     Score=251

Ontologies

Topology

Length:
229
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.26617
Exp number, first 60 AAs:
0.0096
Total prob of N-in:
0.21187
outside
1  -  229
 
 

Population Genetic Test Statistics

Pi
175.543342
Theta
159.744452
Tajima's D
0.290571
CLR
16.873121
CSRT
0.456327183640818
Interpretation
Uncertain
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