SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11254  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012625
Annotation
PREDICTED:_protein_KRI1_homolog_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.94
 

Sequence

CDS
ATGCCGAAGCAGAAGTTGTTTGATGAAGATTCAGCGGATGAGGTCACATTTAAAACTGAAAATGAATACGCAAAGAAGTACGATTCGTGGCGTGAGAAGGAAGAATTACATAAATTGGAACAAAAATATGGAGACAAGGTGCTCAGCTCTGATATCCTAATGTCTTCGGATAGTGAAGATGAAAGTGATGGGCCACCCGAGGTGTCTGAGGAAATGGAGAGACAATTCCTTAAAACTCTTGCACTACTGAAAACTAAAGATCCCAGAATATATAATCCAAGCTTTAAATTCTTTGAAAGTGCTGAAACAAAAGAGCCAGAAAAGGAGCCTAAGACAAAAACTTTAACATTTGCTGACAGTGATGATGATGACGACGAGGATGATGGCAAAATATTCACTATTGAAAAGAAAGCACTAGAACTTGATACAACAGAAGATAAACCTGAAAATAATATCAACCATATTTCTGAAGAAGGTAAACTAAAAGACTATCTAACAGGCAAATCAGAGCACATAGACAATGCAGTAGAGCAAGAACTGGCACCATTGAAAGCTTTGTGGTCTGATCCTAACTTAAATGAAGGGGAGGCCTTCTTGAGAGATTATATACTTAATAAAAAATATTTGGATGAGGGAGATGTAGGAGAAACATTAGACAAGGTTCGAGATGATGATGATCTGGAGGCGGATGAGAAGATGGTTGAGGAACAAGGCAAGTTCGAGAGAGCATACAACTTTAGGTTTGAAGAACCCGACCAAGAGTATCTCAAACGTTTCCCGCGCACAATGAACTACACGCGGCCCAAAGACGACCGCCGATCTCGCAAACGTGCCGAGGCCAAAACCAGGAAAGAGGAGGAGAAAAAGAAAAAAATGGAAGAGATAGCCAGATTGAAGGCTCTCAAACTTAAAGAATTGCAAGAGAAAATGGCCAAGATAAAAGAAGTCACCGGGAATGAGGATTTGGCGTTCACCGAGGAGGACGTGGAGGGCGAGTGGGAGCCGGCGCAGCACGACCGCCGCATGGCCGCGCTGTTCGACCAGCACTACTACGCACGCCCCGACGCGCGCCGGCCCCCCGCCTGCCCCGCCCTCGACCTCGAGCTGGAGATAGAGCATTGGGAGAACTACGAGCCGGAGGGTGGAGAGTCGCACCCTGCGCCGCACGACGCGCCGCACTGCGAGGACCCCGACTTCAACATGGATGCGGACTACGATCCGAACGAAGCCAGGACGAATCTTGTAGAAGAAATAAAACGCAACCTCGGCAACAAACGAAGGAACAGAAAGAAAAAGTCCAAACTGGCGGAGCTGTTGTCCGGGGAGCGGCCCACGTACGTGCCGGGGGACCTGCCCTACGCGCGCTTCATGGAGCAGTACTACGGCATGGACTGCGAGGACGTCATCGCCGGCGACCTGCCCACGCGCTTCAAGTACCGACAAGTGCTGCCCAACGACTTCGGGCTGTCGGTGGAGGAGATTCTTCTGGCAGACGACAAAGAGCTCACGCAGTGGGTGCCGCTCAAGAAGATAGTCAAGTATCGACCTCAACACGTGGAGAAGGGAGACCTCAATACCTACGCAGCGAAAGCGGCCGATATCAACTTGAAGAAGAAAATATTACCGAGTCTCTTCAAGGATTTACCCGAGGAGCCAGAAGTAATCATACCAGAGCAGAAAGTCAACAAAAAGAAAAAGAAGAAGAAGAAAGATAAAAGTAAACAACATAATGCTGAAAACGTCGCAGATGAAAGTGGCCACTCTGTGCACGAGAACGGAGAGCACAATAATACACAGAATGCAGAGGAACAGGTACTAGATAACAACGAAGAACCTACTTCTTGTCATATAAAAGGAAACAGAAACAAAAAGAAGTATAAAGCACAGGACGAATATATAGAAGACACCACTGAAAATGTTGCAGAAGGTAACATAAAAATAGAACTTAGTTCTACTAAAGTAGGAGTCGAAGATAATGTCATCAAGAAGAAAAAGAAATCTAAACACAACAGTAACAACTTCACTGTTGAGGACATCACCGCCGCGCAGCCGAGCCAGCTGGGCGGTCCGCCCCCGCACAGGGCTGCCAAGAGGGAGCTCGGCGGGCTGCCGGACTGCAATGAGCCTTGTGCAAAGAAAACAAAACTCCAAAATATCAAACATAAAAATAATTTTAAATCTAAATTTAACCAAAATAGACACAGCGATAAATTAGAAAATATTTCCGACAACAGACTAAAAGCTTACGGATTGAACCCGAAGAAGTACAGGAATTTCTTGAAATATAAAAATTTTTAA
Protein
MPKQKLFDEDSADEVTFKTENEYAKKYDSWREKEELHKLEQKYGDKVLSSDILMSSDSEDESDGPPEVSEEMERQFLKTLALLKTKDPRIYNPSFKFFESAETKEPEKEPKTKTLTFADSDDDDDEDDGKIFTIEKKALELDTTEDKPENNINHISEEGKLKDYLTGKSEHIDNAVEQELAPLKALWSDPNLNEGEAFLRDYILNKKYLDEGDVGETLDKVRDDDDLEADEKMVEEQGKFERAYNFRFEEPDQEYLKRFPRTMNYTRPKDDRRSRKRAEAKTRKEEEKKKKMEEIARLKALKLKELQEKMAKIKEVTGNEDLAFTEEDVEGEWEPAQHDRRMAALFDQHYYARPDARRPPACPALDLELEIEHWENYEPEGGESHPAPHDAPHCEDPDFNMDADYDPNEARTNLVEEIKRNLGNKRRNRKKKSKLAELLSGERPTYVPGDLPYARFMEQYYGMDCEDVIAGDLPTRFKYRQVLPNDFGLSVEEILLADDKELTQWVPLKKIVKYRPQHVEKGDLNTYAAKAADINLKKKILPSLFKDLPEEPEVIIPEQKVNKKKKKKKKDKSKQHNAENVADESGHSVHENGEHNNTQNAEEQVLDNNEEPTSCHIKGNRNKKKYKAQDEYIEDTTENVAEGNIKIELSSTKVGVEDNVIKKKKKSKHNSNNFTVEDITAAQPSQLGGPPPHRAAKRELGGLPDCNEPCAKKTKLQNIKHKNNFKSKFNQNRHSDKLENISDNRLKAYGLNPKKYRNFLKYKNF

Summary

EMBL
BABH01035994    ODYU01010042    SOQ54865.1    KQ461184    KPJ07523.1    KQ459449    + More
KPJ00886.1    GAIX01013998    JAA78562.1    KZ149965    PZC76213.1    NWSH01000613    PCG75295.1    AGBW02010741    OWR47934.1    LJIG01022772    KRT78798.1    DS235442    EEB15788.1    CCAG010015091    GL451188    EFN79791.1    GDIQ01206803    JAK44922.1    GDIP01078885    JAM24830.1    GDIQ01069292    JAN25445.1    GDIP01176021    GDIP01176020    JAJ47382.1    GDIQ01164501    JAK87224.1    GDIP01089694    JAM14021.1    GDIP01089693    JAM14022.1    GDIP01156922    JAJ66480.1    GDIQ01183200    JAK68525.1    GDIP01165028    JAJ58374.1    GDIP01213331    JAJ10071.1    GDIQ01078779    JAN15958.1    GDIP01218614    GDIP01159731    JAJ63671.1    GDIP01167776    JAJ55626.1    GDIP01213369    JAJ10033.1    GDIQ01106781    JAL44945.1    GDIP01156923    JAJ66479.1    GDIP01169019    JAJ54383.1    GDIP01199711    GDIP01197270    GDIP01182915    GDIP01062844    GDIP01051999    JAJ23691.1    GDIP01231120    GDIP01229421    GDIP01086539    JAI93980.1    GDIP01133571    JAL70143.1    GDIP01231121    GDIP01086540    JAM17175.1    GDIP01222318    JAJ01084.1    GDIP01044742    JAM58973.1    GDIP01238070    JAI85331.1    GDIP01239718    JAI83683.1    GDIP01133572    JAL70142.1    GDIP01206114    GDIP01181271    GDIP01155128    GDIP01130983    GDIP01038394    JAM65321.1    GDIP01239719    JAI83682.1    GDIP01221168    GDIP01211575    GDIP01195065    GDIP01132366    JAJ28337.1    GDIQ01093024    GDIQ01059743    JAN34994.1    GDIP01216422    JAJ06980.1    GDIP01073043    JAM30672.1    GDIP01044743    JAM58972.1    GDIP01236622    JAI86779.1    GDIP01058240    JAM45475.1    GDIP01232420    GDIP01203967    GDIP01197935    JAJ25467.1    GDIP01161080    JAJ62322.1    GDIP01227521    JAI95880.1    GDIP01035195    JAM68520.1    GDIP01222317    JAJ01085.1    GDIP01199712    GDIP01197271    GDIP01182916    GDIP01158879    GDIP01062843    GDIP01051998    JAJ40486.1    GDIP01232419    GDIP01197934    JAJ25468.1    GDIP01202369    GDIP01185619    GDIP01087641    JAJ37783.1    GDIP01078884    JAM24831.1    GDIP01202370    GDIP01087640    JAJ21032.1    GDIP01225114    JAI98287.1    GDIP01221167    GDIP01211574    GDIP01195064    GDIP01132367    JAJ02235.1    GDIP01234820    JAI88581.1    GDIP01238069    JAI85332.1    GDIP01073044    JAM30671.1    GDIP01133570    JAL70144.1    GDIQ01062351    JAN32386.1    GDIP01141128    JAL62586.1    GDIP01181272    GDIP01179370    GDIP01130982    JAJ42130.1    GDIP01141129    JAL62585.1    GDIQ01017974    JAN76763.1    GDIP01147967    JAJ75435.1    GDIP01134639    JAL69075.1   
Pfam
PF12936   Kri1_C        + More
PF05178   Kri1
PF13901   zf-RING_9
PF00130   C1_1
Interpro
IPR018034   Kri1        + More
IPR024626   Kri1-like_C       
IPR002219   PE/DAG-bd       
IPR025258   Zf-RING_9       
IPR001965   Znf_PHD       

Ontologies

Topology

Length:
765
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00010
outside
1  -  765
 
 

Population Genetic Test Statistics

Pi
219.243263
Theta
206.367727
Tajima's D
0.407672
CLR
0.204899
CSRT
0.486625668716564
Interpretation
Uncertain
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