Gene

KWMTBOMO11252

Pre Gene Modal

BGIBMGA012624

Annotation

PREDICTED:_delta(24)-sterol_reductase-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(+):2019710-2023113      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.515

CDS

ATGTTAAGCAGACGAGCATACGGCCCAGCTGATGGTGAGTGTTTACTGTCGCTCATGGACGTCAGCAATGCCAGGGGCAGAGCCAAGCTGCTGCCTACCGTTAAGTACTCTCCACAAGCCTCGTTTGAAGAAGGACATGTCATAGCGCTCCGGAAACACCGCGAGGGTAGCTCATTCCACAGGATGATGGTGCATTTGAAAGCTAGACTGATTAGTTGGTTGGAGAACAACCGGGAGTTAGTAGTGGCGCTGTTCTGTCTGCCAGCCAGCTTCCTGTTCACGGTAGCGCTGCAGCTGCGAGCGCACTTACGGAGACTCGTCGCTCGCGCCGACCAGCACGAGAGGGCCGTTAAAGAGATCCAGGCTAGGGTCCAGGAATGGAACAAGCTTCCGTCACGAGACCGTCGACTGCTGTGCACGTCGAGACCCAACTGGTTGTCTCTCTCTACTACGTTTTTCGAAAAACATCTCCATCATCGAGTTCCTATACCGCTTTACGACATATTGGAGCTGGATGAACAAGCTATGACTGTCAGAGTCGAGCCAATGGTGACCATCGGCGACATCACAGAATACCTCATACCGAAGGGCTATTCATTGGCCGTCACTATTGAATTGGTTGACGCTACACTTGGAGGTCTTGCATTCGGCACTGGAATGTCCACTCACTCCCACAAAGCGGGCTTGTACCACGAGACTATTACTGCGTATGAAGTGGTTCTCGGTGACGGGTCCCTGGTCACAGCTACAGCTGACAATGAACACTCTGATCTCTTCAAAGCCCTCCCGTGGTCGCATGGTAGTCTTGGCTTCCTTGTGGCGCTCACGTTGAAAATTGTCAAAGTAAAACCATTCATTAAGATCAAGTACACTCCGGTTGAAGGACAGAAGGAATATTGCAACATGCTGCGAGAACTTTCTGGAACGTACGAAAGAGAACCTAAAGAATTCCCCGATTTTCTCGAGGCAACAATCTTTAGTGAGAACGAGGCGGTCGTCATGTCAGGAGACTACTGCGACCGCGACCCGACTGCGCCAGTGAATCACTGCTCGAGGTGGTACAAGCCGTGGTTTTACAAACACGTACAGTCCTTCTTGAAGAAGGGGGAGAGCGTCGAGTTGATACCGTTGAAAGATTATTTACTCCGACACAACAGAGCTATCTTCTGGGTCGTCGAGGACATGCTCTCATTCGGAAACGACGCCTTGTTCCGATACTTGTTCGGTTGGCTGCTGCCCCCCAAGCCCGCCTTTTTAAAATTCACGACGACGCCGGGGGTGCGAGCCTACACATTCACGAAGCAAGTCTTCCAAGACATAGTGTTGCCGATCAGTGAACTGGAACGGCAGATCGAGATGGCCACGCAATTGTTTGACAAATTCCCGCTGCTTGTGTACCCGTGTAAAGTGATCGATCGCGGTCCATCGTCCGGACAACTGAAACGACCCCACTCTAAGTACTTGGTCCCGGGAACAAACTATGCGATGTACAATGATTTGGGAGTTTACGGCGTCCCGGGGAAGGTCAAAGAGAAGAAGCCATACAGCCCGGTGACGGCTATGAGAAAGATGGAAGAGTTCACGAGAGAAGTGGGTGGTTTTTCATTTCTTTACGCCGATATATTCATGACCCGAGAGGAGTTTGAGGCCATGTTTGATTTATCTCTGTACGAGAGAGTTCGAAGGAAGTATGGAGCTGAAGGAGCCTTCCCACATTTATATGTTAAAGTCAAGCCAGAGATTGATGTTTTCGCTATTGGTGAAGAGAACGCTGTCCAGTGA

Protein

MLSRRAYGPADGECLLSLMDVSNARGRAKLLPTVKYSPQASFEEGHVIALRKHREGSSFHRMMVHLKARLISWLENNRELVVALFCLPASFLFTVALQLRAHLRRLVARADQHERAVKEIQARVQEWNKLPSRDRRLLCTSRPNWLSLSTTFFEKHLHHRVPIPLYDILELDEQAMTVRVEPMVTIGDITEYLIPKGYSLAVTIELVDATLGGLAFGTGMSTHSHKAGLYHETITAYEVVLGDGSLVTATADNEHSDLFKALPWSHGSLGFLVALTLKIVKVKPFIKIKYTPVEGQKEYCNMLRELSGTYEREPKEFPDFLEATIFSENEAVVMSGDYCDRDPTAPVNHCSRWYKPWFYKHVQSFLKKGESVELIPLKDYLLRHNRAIFWVVEDMLSFGNDALFRYLFGWLLPPKPAFLKFTTTPGVRAYTFTKQVFQDIVLPISELERQIEMATQLFDKFPLLVYPCKVIDRGPSSGQLKRPHSKYLVPGTNYAMYNDLGVYGVPGKVKEKKPYSPVTAMRKMEEFTREVGGFSFLYADIFMTREEFEAMFDLSLYERVRRKYGAEGAFPHLYVKVKPEIDVFAIGEENAVQ

Uniprot

H9JSW2   A0A2A4JYM3   A0A2H1VSB6   A0A2W1BPJ6   A0A0N1ID81   A0A0N1PGV7   + More
A0A212F2H7   A0A0L7L9T6   D6WTX2   V5GXQ9   A0A1W4WBU7   A0A0P5KUL6   A0A0P5YW80   A0A0P5GEV7   A0A0P5J9A1   A0A0N8DB92   A0A0P5YK95   A0A1D2NDB4   C7DR07   A0A0P5WAM6   A0A0P6A5I7   A0A0P6BAP2   A0A0P5PHY4   A0A1B6JIJ3   A0A267FXT9   A0A226F1P3   A0A267H929   A0A267FY07   A0A1B6C9D4   A0A3R7T0B8   A0A0P5NP72   A0A0P5CP71   A0A1W2W6U8   A0A0P4WH00   E3MJD7   Q9XVZ2   A0A261CPQ7   F6ZXA7   H2ZIN9   A0A2H2I517   A0A1I7TRT2   G0MAQ7   A0A1I7SVI7   A0A2G5T0E7   A8X449   A0A0P5CH18   A0A0P4W8Z8   A0A0P6HFF3   H3EYA8   A0A2A2KPH2   A0A261BD58   A0A0P5BQE7   A0A2A2KPD6   A0A2A2KVH6   A0A0P5RHF8   A0A0P5XTY9   A0A0P5RPZ0   A0A1I2FH59   A0A2P4WHZ1   A0A2S9YWS8   A0A2S9YJN9   A0A0C2DFF7   A0A1G0GBE5   A0A367LEX4   A0A369H047   A0A094IY66   A0A179I8B4   A0A162MZF9   A0A369GVF9   W7TVX8   A0A137NTE9   A0A1Y1XUM5   A0A2H4S6G3   A0A1V4JZG3   A0A218UXF9   A0A3L8SQF0   K7F6B9   Q5ZIF2   G1K8B5   A0A3M0KCB9   A0A093Q065   M7B6K0   A0A1S9CYJ4   A0A0S8BZW2  

Pubmed

19121390    28756777    26354079    22118469    26227816    18362917    + More
19820115    27289101    19727923    21292972    9851916    12481130    15114417    21909270    14624247    18806794    26114425    26394399    27774985    26511477    27071652    23966634    25977457    29178836    30282656    17381049    15592404    15642098    23624526    25922666   

EMBL

BABH01035994    NWSH01000411    PCG76593.1    ODYU01003846    SOQ43114.1    KZ149965    + More
PZC76211.1    KQ461184    KPJ07522.1    KQ459449    KPJ00888.1    AGBW02010741    OWR47932.1    JTDY01002142    KOB72016.1    KQ971352    EFA07314.1    GALX01003323    JAB65143.1    GDIQ01184362    JAK67363.1    GDIP01052309    JAM51406.1    GDIQ01249136    JAK02589.1    GDIQ01205159    JAK46566.1    GDIP01050711    JAM53004.1    GDIP01070601    LRGB01002994    JAM33114.1    KZS05093.1    LJIJ01000081    ODN03240.1    GQ199603    GL732567    ACT20728.1    EFX76668.1    GDIP01088803    JAM14912.1    GDIP01046912    JAM56803.1    GDIP01019387    JAM84328.1    GDIQ01133836    JAL17890.1    GECU01008590    JAS99116.1    NIVC01000721    PAA77819.1    LNIX01000001    OXA63121.1    NIVC01000017    PAA94059.1    NIVC01000720    PAA77842.1    GEDC01027191    JAS10107.1    QCYY01000619    ROT83942.1    GDIQ01149832    JAL01894.1    GDIP01171442    JAJ51960.1    GDRN01062447    JAI65069.1    DS268450    EFP03687.1    BX284606    CAA22461.1    NIPN01000002    OZG23886.1    EAAA01002802    GL379788    EGT40606.1    PDUG01000006    PIC20596.1    HE601041    CAP27409.1    GDIP01171444    JAJ51958.1    GDRN01062450    JAI65068.1    GDIQ01019818    JAN74919.1    LIAE01008038    PAV75789.1    NMWX01000001    OZG07670.1    GDIP01181780    JAJ41622.1    PAV75790.1    LIAE01007639    PAV77912.1    GDIQ01102589    JAL49137.1    GDIP01067606    JAM36109.1    GDIQ01104425    JAL47301.1    FOMX01000026    SFF04605.1    LFJK02000005    POM49163.1    PVNL01000019    PRQ09509.1    PVNK01000015    PRQ05323.1    JMCC02000011    KIG18352.1    MGXV01000089    OGT34925.1    LKCN02000007    RCI12967.1    PDHQ01000162    RDA90277.1    JPKC01000171    KFZ01618.1    LUKN01002828    OAQ98532.1    AZHF01000007    OAA73049.1    PDHP01000033    RDA86842.1    AZIL01000038    EWM30282.1    KQ964783    KXN66002.1    MCFE01000445    ORX89423.1    CP023322    ATY58678.1    LSYS01005497    OPJ77037.1    MUZQ01000109    OWK58100.1    QUSF01000010    RLW05965.1    AGCU01155374    AGCU01155375    AGCU01155376    AADN05000647    AJ720832    CAG32491.1    QRBI01000117    RMC08720.1    KL671386    KFW82046.1    KB535465    EMP33601.1    MUGK01000090    OOO01917.1    LJTN01000014    KPK16474.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000007266    UP000192223    UP000076858    UP000094527    UP000000305    UP000215902    UP000198287    UP000283509    UP000008281    UP000001940    UP000216463    UP000008144    UP000007875    UP000005237    UP000095282    UP000008068    UP000095284    UP000230233    UP000008549    UP000005239    UP000218231    UP000216624    UP000199400    UP000237256    UP000238823    UP000237968    UP000031599    UP000253664    UP000253071    UP000029284    UP000076881    UP000252748    UP000070444    UP000193498    UP000190648    UP000197619    UP000276834    UP000007267    UP000000539    UP000001646    UP000269221    UP000053258    UP000031443    UP000191121   

PRIDE

H9JSW2   

Pfam

PF01565   FAD_binding_4

Interpro

IPR036318   FAD-bd_PCMH-like_sf        + More
IPR016169   FAD-bd_PCMH_sub2       
IPR006094   Oxid_FAD_bind_N       
IPR016166   FAD-bd_PCMH       
IPR040165   Diminuto-like       
IPR036691   Endo/exonu/phosph_ase_sf       

SUPFAM

SSF56176   SSF56176        + More
SSF56219   SSF56219       

Gene 3D

3.30.465.10    

ProteinModelPortal

H9JSW2   A0A2A4JYM3   A0A2H1VSB6   A0A2W1BPJ6   A0A0N1ID81   A0A0N1PGV7   + More
A0A212F2H7   A0A0L7L9T6   D6WTX2   V5GXQ9   A0A1W4WBU7   A0A0P5KUL6   A0A0P5YW80   A0A0P5GEV7   A0A0P5J9A1   A0A0N8DB92   A0A0P5YK95   A0A1D2NDB4   C7DR07   A0A0P5WAM6   A0A0P6A5I7   A0A0P6BAP2   A0A0P5PHY4   A0A1B6JIJ3   A0A267FXT9   A0A226F1P3   A0A267H929   A0A267FY07   A0A1B6C9D4   A0A3R7T0B8   A0A0P5NP72   A0A0P5CP71   A0A1W2W6U8   A0A0P4WH00   E3MJD7   Q9XVZ2   A0A261CPQ7   F6ZXA7   H2ZIN9   A0A2H2I517   A0A1I7TRT2   G0MAQ7   A0A1I7SVI7   A0A2G5T0E7   A8X449   A0A0P5CH18   A0A0P4W8Z8   A0A0P6HFF3   H3EYA8   A0A2A2KPH2   A0A261BD58   A0A0P5BQE7   A0A2A2KPD6   A0A2A2KVH6   A0A0P5RHF8   A0A0P5XTY9   A0A0P5RPZ0   A0A1I2FH59   A0A2P4WHZ1   A0A2S9YWS8   A0A2S9YJN9   A0A0C2DFF7   A0A1G0GBE5   A0A367LEX4   A0A369H047   A0A094IY66   A0A179I8B4   A0A162MZF9   A0A369GVF9   W7TVX8   A0A137NTE9   A0A1Y1XUM5   A0A2H4S6G3   A0A1V4JZG3   A0A218UXF9   A0A3L8SQF0   K7F6B9   Q5ZIF2   G1K8B5   A0A3M0KCB9   A0A093Q065   M7B6K0   A0A1S9CYJ4   A0A0S8BZW2  

PDB

5L6G     E-value=0.000197982,     Score=108

KEGG

101746101    K09828 Delta24-sterol reductase [EC:1.3.1.72 1.3.1.-] | (RefSeq) delta(24)-sterol reductase-like

PATHWAY

00100    Steroid biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016491   GO:0071949   GO:0016021   GO:0050660   GO:0008202   GO:0016628   GO:0016020   GO:0005737   GO:0000246   GO:0019899   GO:0031639   GO:0030539   GO:0009888   GO:0006979   GO:0005783   GO:0043588   GO:0043154   GO:0005634   GO:0042987   GO:0008104   GO:0061024   GO:0042605   GO:0006695   GO:0003824   GO:0016614   GO:0006508   GO:0005515   GO:0006811   GO:0005622   GO:0006810   GO:0055114  

PANTHER

PTHR10801  

Length:

593

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

16.06728

Exp number, first 60 AAs:

0.00026

Total prob of N-in:

0.75277

outside

1  -  593

 

 

Pi

150.289218

Theta

208.252144

Tajima's D

-0.88062

CLR

1.10772

CSRT

0.163541822908855

Interpretation

Uncertain