Gene

KWMTBOMO11245

Pre Gene Modal

BGIBMGA012618

Annotation

PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr19(+):1770455-1773866      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.007 Mitochondrial   Reliability : 1.465

CDS

ATGGATTTTGCTAAATATATTCCACTTTTTGAACAATATTGCCGGTACAAAGGCGACGTTCAGTTGAAGCTCTGCGTCTCAACTCTCGGGTTGCTTTCAAAACTCCTTCTCCTTCTCACATTAACATCAGTAAAAGCTGATCTTTTCACCAAAGCGACGAGGACAAAAGCCGATGAAAGGGATCTTAGACAAAGTGTTTTTGATTTCATAATTGTCGGCGGAGGCACTGCTGGCTGCGTCTTGGCTAACAGGCTGTCAGCTGTCTCGGATTGGAAGGTTCTTTTAGTAGAAACTGGTGATGATGAGAACATAGATTATAATATCCCAGGAGTTCCGACCAATGAGTACCGTCCGATTCTGTGGAACTATAGGACAGAGAGAAACGGCTACTCCTGTCTATCCAGGCCTAGTGGAAGCTGCGAGGTCAAAACTGGAAAAGTACTCGGGGGCTCCAGTGTAACCAACGATATGAAGTATACAAGAGGCTCTAAAGTGGACTATGATGGCTGGCACAATACTGGAACGCTTGCCTCTTTGGAGTGGAAGTTCGAAAATTTAATTGATGACTTTAAATACAGCGAAGATAACGGAGATTACGACATCTTAATGAACTCATTATATCACTCTCGCGGTGGAGAGATGCACGTCAAAAAGTTCAAGTATACAGATCGATACATCGAAGTATTTAATGGAGCTTTCTCTGAAATGGGCTTACGGACCTTGGATATAAATACAAATATTCCAGAAGCTGTTGTTAATAATCAATTCGCAATGATAAACAATACTAGACTTAGTACTAATAGTGCCTTTTTGAAGCCAGTAAGACACAGGAAGAATCTAACAATTCTGAAGGGAGCTACAGTTACCAAAATTGTTATCAATAAACAAGAAAATACAGTTGATGGAATTTTGTATGAGATAGAAAAGGGTAAAGAAAGACCCGCTTATGTTAAAAGAGAAATAATTCTCACTACTGGAGCCATCAACAATGTGCGTTTGTTACACTTATCTGGAATAGGTCCAAAGATAGAATTGAAAAAGTATAATATTACTACTATCAAAGATCTTCCTGTAGGAATGAATTACCAAGATCAAGTCACCACTGGGGGTCTGGCTTTCGTGATGAACGATGTCGCACCGGTTACTGAGGAAAAAATTACTAATGATTTCAAGACCTGGTTCCAGAGCCGTAGTGGTCCGTTAGCTTCTAGAGGAATTAATCAAGTATCTGCATTTTTACAATTATATGAAAACATTAATGCTCCGGACGTTGAATTGGCATTAGATGGAAACTATATTAGAAGCGATAAGTATTTACTAACCAATCTTACCGTTCACAGCGCTGAAGAATTTAATCTACCGCTTCCTTATTATAATTTAGTTAATATTCACCCAATTTTACTGAGACCCAAAAGCAAAGGTCGAGTACTTTTAAACAAAAGAAACCCAAAGTATGGTCGACCAGTCATACAAGCAAACTTGCTAAAGGAAACAGAGGATCTGGACACTTTGGTTGATAGCATAGACATTGCTTTGCAACTCCTTGATACCAAAGAAATGAAGAAAGCAGAAGTGAAATTTGCTCCTTTAGACTTATTTCCGTGCGATAGACTAAGCAACAGAGATCAATGGAACTGCATAGCCAGACATTATACTAGAGCCATGAGTAGGCCTATTGGGACTTGTAGAATGGGAGATAATAGCACGGAGTCCGTAGTAGACTTCCAGCTTAGGGTACACGGCATCGAAGGTTTGCGCATAATTGATGCTTCTGTTATGCCTTCACACGTCCGTGGAGGCATATTTGCACCGACATTGATGATAGCAGAGAAAGGTGCAAAAATGATTTTAAAAGATTGGAAAGAAAATAAAGCTATCATTATCACAGGAGCAGCAGTTGAACCTCTAGTTATCTTAGGAATTATTGACGCATCTACCACTCTTAAATTAGAAATACCGTACACCCCCAGACTACTGTCGACAACTGATTTCGAATCAGTGACTGTACCCATCTTACATGTGCCTACGTAA

Protein

MDFAKYIPLFEQYCRYKGDVQLKLCVSTLGLLSKLLLLLTLTSVKADLFTKATRTKADERDLRQSVFDFIIVGGGTAGCVLANRLSAVSDWKVLLVETGDDENIDYNIPGVPTNEYRPILWNYRTERNGYSCLSRPSGSCEVKTGKVLGGSSVTNDMKYTRGSKVDYDGWHNTGTLASLEWKFENLIDDFKYSEDNGDYDILMNSLYHSRGGEMHVKKFKYTDRYIEVFNGAFSEMGLRTLDINTNIPEAVVNNQFAMINNTRLSTNSAFLKPVRHRKNLTILKGATVTKIVINKQENTVDGILYEIEKGKERPAYVKREIILTTGAINNVRLLHLSGIGPKIELKKYNITTIKDLPVGMNYQDQVTTGGLAFVMNDVAPVTEEKITNDFKTWFQSRSGPLASRGINQVSAFLQLYENINAPDVELALDGNYIRSDKYLLTNLTVHSAEEFNLPLPYYNLVNIHPILLRPKSKGRVLLNKRNPKYGRPVIQANLLKETEDLDTLVDSIDIALQLLDTKEMKKAEVKFAPLDLFPCDRLSNRDQWNCIARHYTRAMSRPIGTCRMGDNSTESVVDFQLRVHGIEGLRIIDASVMPSHVRGGIFAPTLMIAEKGAKMILKDWKENKAIIITGAAVEPLVILGIIDASTTLKLEIPYTPRLLSTTDFESVTVPILHVPT

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

H9JSV6   A0A2Z5UWZ3   A0A2W1BRG2   A0A2H1WDI9   A0A0N1INC3   A0A0N1I9N2   + More
A0A212F2G7   A0A0L7KXH2   J9JJZ7   A0A2S2PRI8   A0A2S2QWK2   A0A2P8ZKR6   E0VFX6   K7J278   A0A154PBV5   A0A232FLV0   A0A3L8D6T0   A0A088AJU8   A0A0M8ZT63   A0A0M8ZRW9   A0A2J7RBH7   A0A0L7RJT5   K7J043   E2BJK2   A0A232EYA8   A0A310ST84   A0A0N0BBJ4   A0A2A3EHZ9   A0A067RC53   A0A2J7QFI3   A0A232EL32   A0A2J7QFJ6   A0A2J7QFH1   H9JW74   K7J0Y3   K7IPD7   A0A139WEV9   H9JWN7   A0A2A4JMY6   K7J0D1   A0A2H1X0I6   A0A2W1BFE7   A0A067R493   E0VUA7   A0A0C9QE18   A0A232FF98   A0A2P8XFT3   A0A2A4JID4   K7J281   K7J0C4   A0A224XLN0   A0A2J7Q2J7   A0A2J7Q2I0   A0A194QP52   A0A1B6D9F6   T1HCA7   A0A2J7QTE5   A0A2P8XR67   A0A232FKY7   A0A2J7RBH2   A0A2J7PRD5   K7IV19   A0A067RKI1   A0A212FML5   A0A194RET1   A0A232F8Y5   A0A0N1PFX8   A0A2S2R240   A0A026WCZ8   A0A3L8D7W0   A0A1A9WC57   K7IXL5   A0A0N0PAP0   A0A067QSX6   A0A151WMQ2   A0A2J7PES5   A0A2A4JIB7   A0A232FM80   A0A151I237   A0A194PY98   E9IKF8   A0A291P0Y5   A0A0N0P9F7   A0A1B6F402   A0A291P0N5   A0A2P8YJ25   F5HJA1   A0A195E3M0   E9IKG5   A0A2Z5UWZ1   A0A088AJU4   A0A232F996   F5HJA2   F4WAD9   A0A2J7PET3   A0A1B6DKE4   A0A1W4XEG1   A0A1B6DYE3   D2A3N1  

Pubmed

19121390    29425254    28756777    26354079    22118469    26227816    + More
29403074    20566863    20075255    28648823    30249741    20798317    24845553    18362917    19820115    24508170    21282665    28986331    12364791    14747013    17210077    21719571   

EMBL

BABH01035963    LC085606    BBB15976.1    KZ149965    PZC76205.1    ODYU01007937    + More
SOQ51145.1    KQ461184    KPJ07515.1    KQ459449    KPJ00897.1    AGBW02010753    OWR47911.1    JTDY01004802    KOB67734.1    ABLF02037931    GGMR01019368    MBY31987.1    GGMS01012934    MBY82137.1    PYGN01000027    PSN57091.1    DS235129    EEB12282.1    AAZX01006810    AAZX01008181    KQ434869    KZC09322.1    NNAY01000068    OXU31327.1    QOIP01000012    RLU16177.1    KQ435889    KOX69466.1    KQ435923    KOX68393.1    NEVH01005904    PNF38171.1    KQ414579    KOC71130.1    GL448571    EFN84159.1    NNAY01001663    OXU23279.1    KQ759784    OAD62860.1    KQ435991    KOX67668.1    KZ288238    PBC31350.1    KK852802    KDR16287.1    NEVH01015297    PNF27347.1    NNAY01003669    OXU19031.1    PNF27348.1    PNF27345.1    BABH01025443    KQ971354    KYB26474.1    BABH01018352    NWSH01000973    PCG73341.1    ODYU01012451    SOQ58762.1    KZ150184    PZC72475.1    KK852991    KDR12780.1    DS235784    EEB16963.1    GBYB01012653    JAG82420.1    NNAY01000290    OXU29434.1    PYGN01002308    PSN30832.1    NWSH01001458    PCG71172.1    AAZX01008029    GFTR01007495    JAW08931.1    NEVH01019370    PNF22797.1    PNF22796.1    KQ458756    KPJ05261.1    GEDC01015002    GEDC01002775    JAS22296.1    JAS34523.1    ACPB03007733    ACPB03007734    ACPB03007735    ACPB03007736    NEVH01011195    PNF31843.1    PYGN01001493    PSN34475.1    OXU31332.1    PNF38172.1    NEVH01022362    PNF18879.1    AAZX01001198    KK852622    KDR19978.1    AGBW02007651    OWR55004.1    KQ460323    KPJ15969.1    NNAY01000675    OXU27062.1    KQ461158    KPJ08048.1    GGMS01014842    MBY84045.1    KK107261    EZA53937.1    RLU16172.1    AAZX01005632    KPJ07516.1    KK853319    KDR08567.1    KQ982937    KYQ49100.1    NEVH01026088    PNF14837.1    PCG71173.1    NNAY01000026    OXU31834.1    KQ976551    KYM80868.1    KQ459588    KPI97724.1    GL763984    EFZ18947.1    MF687602    ATJ44528.1    KPJ00896.1    GECZ01024829    JAS44940.1    MF687547    ATJ44473.1    PYGN01000560    PSN44247.1    AAAB01008844    EGK96362.1    KQ979701    KYN19666.1    EFZ18935.1    BBB15977.1    NNAY01000704    OXU26887.1    EGK96363.1    GL888048    EGI68822.1    PNF14838.1    GEDC01024026    GEDC01011147    JAS13272.1    JAS26151.1    GEDC01006623    JAS30675.1    KQ971348    EFA05531.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000037510    UP000007819    + More
UP000245037    UP000009046    UP000002358    UP000076502    UP000215335    UP000279307    UP000005203    UP000053105    UP000235965    UP000053825    UP000008237    UP000242457    UP000027135    UP000007266    UP000218220    UP000015103    UP000053097    UP000091820    UP000075809    UP000078540    UP000007062    UP000078492    UP000007755    UP000192223   

PRIDE

H9JSV6    H9JW74    H9JWN7   

Pfam

PF05199   GMC_oxred_C        + More
PF00732   GMC_oxred_N
PF00320   GATA

Interpro

IPR036188   FAD/NAD-bd_sf        + More
IPR000172   GMC_OxRdtase_N       
IPR007867   GMC_OxRtase_C       
IPR012132   GMC_OxRdtase       
IPR013088   Znf_NHR/GATA       
IPR000679   Znf_GATA       

SUPFAM

SSF51905   SSF51905       

Gene 3D

3.50.50.60     3.30.50.10    

CDD

cd00202  ZnF_GATA

ProteinModelPortal

H9JSV6   A0A2Z5UWZ3   A0A2W1BRG2   A0A2H1WDI9   A0A0N1INC3   A0A0N1I9N2   + More
A0A212F2G7   A0A0L7KXH2   J9JJZ7   A0A2S2PRI8   A0A2S2QWK2   A0A2P8ZKR6   E0VFX6   K7J278   A0A154PBV5   A0A232FLV0   A0A3L8D6T0   A0A088AJU8   A0A0M8ZT63   A0A0M8ZRW9   A0A2J7RBH7   A0A0L7RJT5   K7J043   E2BJK2   A0A232EYA8   A0A310ST84   A0A0N0BBJ4   A0A2A3EHZ9   A0A067RC53   A0A2J7QFI3   A0A232EL32   A0A2J7QFJ6   A0A2J7QFH1   H9JW74   K7J0Y3   K7IPD7   A0A139WEV9   H9JWN7   A0A2A4JMY6   K7J0D1   A0A2H1X0I6   A0A2W1BFE7   A0A067R493   E0VUA7   A0A0C9QE18   A0A232FF98   A0A2P8XFT3   A0A2A4JID4   K7J281   K7J0C4   A0A224XLN0   A0A2J7Q2J7   A0A2J7Q2I0   A0A194QP52   A0A1B6D9F6   T1HCA7   A0A2J7QTE5   A0A2P8XR67   A0A232FKY7   A0A2J7RBH2   A0A2J7PRD5   K7IV19   A0A067RKI1   A0A212FML5   A0A194RET1   A0A232F8Y5   A0A0N1PFX8   A0A2S2R240   A0A026WCZ8   A0A3L8D7W0   A0A1A9WC57   K7IXL5   A0A0N0PAP0   A0A067QSX6   A0A151WMQ2   A0A2J7PES5   A0A2A4JIB7   A0A232FM80   A0A151I237   A0A194PY98   E9IKF8   A0A291P0Y5   A0A0N0P9F7   A0A1B6F402   A0A291P0N5   A0A2P8YJ25   F5HJA1   A0A195E3M0   E9IKG5   A0A2Z5UWZ1   A0A088AJU4   A0A232F996   F5HJA2   F4WAD9   A0A2J7PET3   A0A1B6DKE4   A0A1W4XEG1   A0A1B6DYE3   D2A3N1  

PDB

5NCC     E-value=8.19539e-56,     Score=552

KEGG

101736659    no KO assigned | (RefSeq) glucose dehydrogenase [FAD, quinone]-like

GO

GO:0050660   GO:0016614   GO:0004344   GO:0016021   GO:0006355   GO:0043565   GO:0008270   GO:0016491   GO:0004190   GO:0006508   GO:0005515   GO:0006811   GO:0005622   GO:0006810   GO:0003824   GO:0055114  

Length:

676

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7.21800999999999

Exp number, first 60 AAs:

4.84107

Total prob of N-in:

0.15753

outside

1  -  676

 

 

Pi

166.656645

Theta

169.741354

Tajima's D

-0.884771

CLR

1.308998

CSRT

0.160641967901605

Interpretation

Uncertain