Silkworm Genome Informatics Database

Gene

KWMTBOMO11244

Pre Gene Modal

BGIBMGA012615

Annotation

pheromone-binding_protein_1_[Bombyx_mandarina]

Location

Bomo_Chr19(+):1743355-1755417 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 3.76

CDS

ATGTCTATCCAAGGACAGATCGCTTTGGCGCTCATGGTCTACATGGCTGTGGGCTCAGTGGATGCGTCTCAAGAAGTCATGAAGAACTTATCCTTAAATTTCGGTAAAGCATTGGACGAATGCAAAAAAGAGATGACGCTAACAGATGCGATCAATGAAGACTTCTACAATTTCTGGAAAGAGGGATATGAAATTAAAAACCGGGAGACTGGATGCGCTATAATGTGCCTTTCCACCAAGCTAAACATGCTCGACCCTGAAGGAAACCTTCATCACGGAAACGCTATGGAGTTTGCCAAGAAACATGGAGCCGATGAGACGATGGCCCAACAACTGATCGACATAGTGCATGGCTGCGAAAAGTCCACTCCAGCTAACGATGACAAGTGTATCTGGACCCTCGGTGTCGCGACCTGCTTCAAAGCTGAAATCCACAAATTGAACTGGGCTCCGAGCATGGACGTAGCAGTGGGAGAAATTTTAGCTGAAATGGGCCTCACAGAAACAGTTTTGAAAGATTTTTATAATTTTTGGATAGAAGATTATGAATTTACCGATCGCAATACGGGCTGTGCAATCCTGTGCATGTCCAAAAAACTAGAACTTATGGATGGAGATTATAATTTACATCACGGAAAAGCTCACGAGTTTGCTAGGAAGCATGGCGCTGATGAAACAATGGCAAAACAGCTAGTGGACCTCATCCACGGGTGTTCGCAATCCGTCGCAACTATGCCTGATGAATGCGAAAGAACACTGAAGGTGGCAAAATGCTTCATCGCTGAGATCCACAAGTTAAAATGGGCCCCCGACGTGGAGCTCTTAATGGCAGAGGTCTTAAATGAGGATAACGCACAGCCTAAATTATCAACGATAAATTTGATCAACGGTATATGGCATAAACAATTGGACTATGCCAATTTCACGATGCTTTGTAATCTGAGACACTTCCAACCAGAAGTTCGGCTAAAAGTTATGACGTTTTGGTATTCTGAAAGCTCGACATGGGATAGAGATGTTGGTTGTGCTTTCTTGTGTATCTTTAAGAAAATGGAAATTGATAATCCACAGGACCCTTCATATAGAACTCATTTGGAACTTTTAAGTTTTGCAAACAGTGAAGAGAAGAGTAAAATGGCGAGATACAATATAGTGGTTGCTGTACTGGTTCTTGGGGTAGTTGGTGCCAGAGGCTCTTCAGAAGCAATGAGACACATCGCAACAGGTTTCATTCGAGTCCTTGACGAGTGTAAACAAGAACTCGGTCTCACGGACCACATCCTGACAGACATGTATCACTTCTGGAAGCTGGACTACTCTATGATGACTAGAGAGACAGGGTGCGCCATAATATGCATGAGCAAGAAGCTGGATCTGATCGACGGAGACGGGAAACTACATCACGGGAACGCACAGGCCTACGCTCTGAAGCATGGCGCTGCCACTGAGGTAGCTGCAAAACTGGTGGAAGTGATCCACGGGTGTGAGAAGCTGCACGAATCGATAGACGACCAGTGCTCCAGAGTACTGGAGGTGGCCAAGTGTTTCAGGACTGGCGTGCACGAGCTCCACTGGGCACCGAAACTCGACGTCATTGTAGGAGAAGTTATGACGGAAATATAA

Protein

MSIQGQIALALMVYMAVGSVDASQEVMKNLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLNMLDPEGNLHHGNAMEFAKKHGADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMDVAVGEILAEMGLTETVLKDFYNFWIEDYEFTDRNTGCAILCMSKKLELMDGDYNLHHGKAHEFARKHGADETMAKQLVDLIHGCSQSVATMPDECERTLKVAKCFIAEIHKLKWAPDVELLMAEVLNEDNAQPKLSTINLINGIWHKQLDYANFTMLCNLRHFQPEVRLKVMTFWYSESSTWDRDVGCAFLCIFKKMEIDNPQDPSYRTHLELLSFANSEEKSKMARYNIVVAVLVLGVVGARGSSEAMRHIATGFIRVLDECKQELGLTDHILTDMYHFWKLDYSMMTRETGCAIICMSKKLDLIDGDGKLHHGNAQAYALKHGAATEVAAKLVEVIHGCEKLHESIDDQCSRVLEVAKCFRTGVHELHWAPKLDVIVGEVMTEI

Uniprot

NA

ProteinModelPortal

NA

PDB

2FJY E-value=1.49737e-78, Score=747

KEGG

100036586 no KO assigned | (RefSeq) Pbp3; pheromone binding protein 3

GO

GO:0005549 GO:0006810 GO:0015074 GO:0004190 GO:0006508 GO:0005515 GO:0006811 GO:0005622 GO:0003824

SignalP

Position: 1 - 22, Likelihood: 0.985159

Length:

540

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.84257000000001

Exp number, first 60 AAs:

2.02852

Total prob of N-in:

0.11364

outside

1 - 540

Pi

204.996425

Theta

161.618749

Tajima's D

0.796207

CLR

0.207885

CSRT

0.605119744012799

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics