Gene

KWMTBOMO11238

Pre Gene Modal

BGIBMGA012611

Annotation

general_odorant-binding_protein_1_precursor_[Bombyx_mori]

Location

Bomo_Chr19(+):1572845-1576704      View in EpiBrowser

Full name

General odorant-binding protein 1       + More
General odorant-binding protein 2      

Alternative Name

APR-10
Pheromone-binding protein 10

Location in the cell

Extracellular   Reliability : 3.05

CDS

ATGGTCACCTTAGTAGATCAGATTCCGCACTATATGTATGATGTCGCATTCTGTAGCCTTCAGTCTGTCATTTTGAAGATGTGGAAACTAGTTGTCGTTTTGACTGTTAACTTACTCCAGGGAGCGCTGACAGATGTCTACGTCATGAAAGACGTCACTCTGGGGTTTGGGCAGGCGCTTGAGCAGTGCAGAGAGGAGAGTCAACTTACCGAAGAGAAGATGGAGGAGTTCTTCCACTTCTGGAATGATGACTTCAAGTTCGAACACAGAGAGCTGGGCTGTGCGATCCAGTGCATGAGCAGACATTTCAACCTCCTCACGGATTCCAGCAGGATGCACCACGAGAACACCGACAAATTCATCAAGTCCTTTCCGAACGGCGAAATCCTATCACAGAAGATGATAGATATGATACACACGTGCGAAAAAAAGTTTGACTCAGAGCCTGACCACTGCTGGCGTATTCTAAGAGTGGCTGAATGTTTCAAGGACGCGTGTAATAAGTCCGGATTAGCGCCTTCAATGGAACTGATATTGGCGGAGTTCATAATGGAATCGGAAGCGGACAAATGA

Protein

MVTLVDQIPHYMYDVAFCSLQSVILKMWKLVVVLTVNLLQGALTDVYVMKDVTLGFGQALEQCREESQLTEEKMEEFFHFWNDDFKFEHRELGCAIQCMSRHFNLLTDSSRMHHENTDKFIKSFPNGEILSQKMIDMIHTCEKKFDSEPDHCWRILRVAECFKDACNKSGLAPSMELILAEFIMESEADK

Description

Present in the aqueous fluid surrounding olfactory sensory dendrites and are thought to aid in the capture and transport of hydrophobic odorants into and through this fluid.

Subunit

Homodimer.

Similarity

Belongs to the PBP/GOBP family.

Keywords

Complete proteome   Direct protein sequencing   Disulfide bond   Olfaction   Reference proteome   Sensory transduction   Signal   Transport   3D-structure  

Feature

chain  General odorant-binding protein 1

Uniprot

H9JSV0   P34171   P87508   A0A345BES2   A0A1B3P5I6   S5T759   + More
P31418   J7G8L0   I1V1V7   A0A2W1BU64   A0A3B0EY70   Q5G1R2   A0A386H9A1   D0E9M4   A0A0K8TUG6   A0A2A4J3R7   A0A0D3L4F6   A0A2H1X5K6   Q27226   A0A0D3L4A2   A0A0P0IGU5   W5XKH8   A1Z1R1   Q00G29   A0A142C7A8   D1LYG6   Q95UJ5   A0A0K0MNP5   Q00G28   A0A0D3L484   A0A075DY87   M4TAA3   A0A0D3L4B7   A0A023I2T6   C0JAP4   A0A0N1ID75   A0A0N1I4K7   I6QLR4   A0A059PCQ9   H9XTU5   A0A0K0KFH5   A0A212F2F4   A0A1B0VEI1   C6F017   A8IJH0   A0A0L7L5W4   A0A346FW83   A0A3G2YUX2   B0FZ35   B5L5X6   A0A2Z5V699   A0A2H4FXX2   H9XFD0   A0A0L7L6S4   A0A2Z5UXS4   A0A2Z5UXM0   A0A1B4ZBH4   A0A3G6V785   A0A386H9B7   A0A0S1S6H9   A0A2U9PF24   A0A3Q9NAH0   A0A346FW84   A0A2H1VX40   H6UEU3   A0A023I2F9   J7G4I1   Q27288   A0A088MJX9   P34170   Q6V4U9   A0A1V1WBY0   Q95VP2   Q9BLY6   A0A2A4JY91   I1V1V8   A0A0G2YHQ6   Q9GRW2   Q7YT53   A0A097BVN8   A0A2W1BSL1   V9TQT3   A0A1B3P5J4   O61563   A0A0D3L4F5   A8CK64   A0A0N7IQU8   A1Z1R2   I6QZY2   A0A0L7KX78   Q6DKZ2   C0JAP5   A0A3G2YUZ0   H9XTU6   B0FZ36   Q17075   H9XFD1   A0A0D3L4D7  

Pubmed

19121390    8900598    2010751    9783439    29727827    27538507    + More
23894529    1719155    28756777    19789654    26017144    8508187    26346731    25345813    23499610    29375398    26354079    24728949    22454283    22118469    26227816    29425254    30465940    26517714    29869368    22648659    19371749    12530222    12459206    25460831    9874246    19152087   

EMBL

BABH01035949    X94988    Y10970    MG788228    AXF48746.1    KX655910    + More
AOG12859.1    KC887506    AGS36742.1    M73797    JN701809    AFP66957.1    JQ394902    AFI25167.1    KZ149965    PZC76186.1    RBVL01000061    RKO12629.1    AY864774    AAW65076.1    MG546573    AYD42196.1    GQ433367    ACX47893.1    GCVX01000096    JAI18134.1    NWSH01003619    PCG66043.1    KC783392    AGJ83358.1    ODYU01013191    SOQ59884.1    X96862    KC783389    AGJ83355.1    KR780027    ALJ93806.1    KF840411    AHI16728.1    EF159978    EU086372    KP331514    ABM54823.1    ABV32168.1    AKI87960.1    DQ838577    ABI24159.1    KT963078    AMP46760.1    GU082319    ACY78412.1    AY049739    AAL09821.1    KM272263    AKF16201.1    DQ838578    ABI24160.1    KC783391    AGJ83357.1    KF208643    AHY86493.1    JX962784    AGH70097.1    KC783390    KY225486    AGJ83356.1    ARO70498.1    JX978464    AGS41498.1    FJ156732    ACN29680.1    KQ461184    KPJ07508.1    KQ459449    KPJ00908.1    JQ822243    AFM36759.1    JX275383    AGJ71276.1    JN857939    AFH02841.1    KF513152    AII15787.1    AGBW02010753    OWR47903.1    KT070561    AMR99729.1    EU825765    EU825766    EU825767    EU825768    ACJ07126.1    EU163980    ABW05104.2    JTDY01002721    KOB70852.1    MF538528    AXN76737.1    MG820722    AYP30814.1    EU368114    ABY71034.1    EU413989    ACB47481.1    LC085603    BBB15960.1    KY130468    APG32536.1    JN867057    AFG72996.1    JTDY01002570    KOB71173.1    LC085601    BBB15958.1    LC085602    BBB15959.1    LC027683    BAV56786.1    MH027970    AZB49388.1    MG546577    AYD42200.1    KT803048    ALM04194.1    MG256559    AWT50454.1    MH050634    AZT78911.1    MF538529    AXN76738.1    ODYU01004992    SOQ45417.1    JN637466    AEZ52491.1    JX978465    AGS41499.1    JN701810    AFP66958.1    X96863    KJ143717    AIN41151.1    X94989    AY351670    AAQ54909.1    GENK01000024    JAV45889.1    AF411460    AAL05869.1    AY017411    AAG54078.1    NWSH01000361    PCG76987.1    JQ394903    AFI25168.1    KP331515    AKI87961.1    AJ278991    CAC08211.1    AY301980    AAP57462.1    KJ956693    AIS72932.1    PZC76187.1    KF150178    AHC72380.1    KX655913    AOG12862.1    AF051144    AAC05703.2    KC783387    AGJ83353.1    EU086371    ABV32167.1    KR780028    ALJ93807.1    EF159979    ABM54824.1    JQ822244    AFM36760.1    JTDY01004678    KOB67878.1    AY669087    AAT74555.1    FJ156733    ACN29681.1    MG820729    AYP30821.1    JN857940    AFH02842.1    EU368115    KT070564    ABY71035.2    AMR99732.1    X96772    JN867058    AFG72997.1    KC783388    AGJ83354.1   

Proteomes

UP000005204    UP000276569    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000037510   

PRIDE

H9JSV0    P34171    Q27288    P34170   

Pfam

PF01395   PBP_GOBP

Interpro

IPR006072   Odorant/phero-bd_Lep        + More
IPR036728   PBP_GOBP_sf       
IPR006170   PBP/GOBP       

SUPFAM

SSF47565   SSF47565       

Gene 3D

1.10.238.20    

ProteinModelPortal

H9JSV0   P34171   P87508   A0A345BES2   A0A1B3P5I6   S5T759   + More
P31418   J7G8L0   I1V1V7   A0A2W1BU64   A0A3B0EY70   Q5G1R2   A0A386H9A1   D0E9M4   A0A0K8TUG6   A0A2A4J3R7   A0A0D3L4F6   A0A2H1X5K6   Q27226   A0A0D3L4A2   A0A0P0IGU5   W5XKH8   A1Z1R1   Q00G29   A0A142C7A8   D1LYG6   Q95UJ5   A0A0K0MNP5   Q00G28   A0A0D3L484   A0A075DY87   M4TAA3   A0A0D3L4B7   A0A023I2T6   C0JAP4   A0A0N1ID75   A0A0N1I4K7   I6QLR4   A0A059PCQ9   H9XTU5   A0A0K0KFH5   A0A212F2F4   A0A1B0VEI1   C6F017   A8IJH0   A0A0L7L5W4   A0A346FW83   A0A3G2YUX2   B0FZ35   B5L5X6   A0A2Z5V699   A0A2H4FXX2   H9XFD0   A0A0L7L6S4   A0A2Z5UXS4   A0A2Z5UXM0   A0A1B4ZBH4   A0A3G6V785   A0A386H9B7   A0A0S1S6H9   A0A2U9PF24   A0A3Q9NAH0   A0A346FW84   A0A2H1VX40   H6UEU3   A0A023I2F9   J7G4I1   Q27288   A0A088MJX9   P34170   Q6V4U9   A0A1V1WBY0   Q95VP2   Q9BLY6   A0A2A4JY91   I1V1V8   A0A0G2YHQ6   Q9GRW2   Q7YT53   A0A097BVN8   A0A2W1BSL1   V9TQT3   A0A1B3P5J4   O61563   A0A0D3L4F5   A8CK64   A0A0N7IQU8   A1Z1R2   I6QZY2   A0A0L7KX78   Q6DKZ2   C0JAP5   A0A3G2YUZ0   H9XTU6   B0FZ36   Q17075   H9XFD1   A0A0D3L4D7  

PDB

2WCM     E-value=3.69436e-39,     Score=401

KEGG

693051    no KO assigned | (RefSeq) GOBP1; general odorant binding protein 1

GO

GO:0005549   GO:0050896   GO:0007608   GO:0006810   GO:0008152   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0003824  

Length:

190

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.62682999999999

Exp number, first 60 AAs:

4.62571

Total prob of N-in:

0.14751

outside

1  -  190

 

 

Pi

224.67843

Theta

183.215384

Tajima's D

2.115039

CLR

0.519791

CSRT

0.900054997250137

Interpretation

Uncertain