SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11237
Pre Gene Modal
BGIBMGA012588
Annotation
PREDICTED:_tafazzin_homolog_[Amyelois_transitella]
Full name
Tafazzin family protein       + More
Tafazzin homolog      
Location in the cell
Mitochondrial   Reliability : 2.009
 

Sequence

CDS
ATGAGCTACGACATCGGTTGGATTATCCCTCGGCTGCGAAACCCGGGGCGGCTGTGGTATTGTGCGAGCTCGCTCACAGTCGCCGTCGTGGGACTTTTTAGCAAAATTATAATAGAATTCTTAAATAAAACGACAGTGTACAACAAAGAGACGCTCCGCCGAGCGGTGCTCCGGCCCCCTGGAGTGCCGCTCCTCACCATCTCCAACCACCACTCGTGCTTCGACGACCCGGGACTCTGGGGCGTCTTAGACTATGTAGTTCTACTCCGCGAATCCCGGATGCGCTGGTCGCTCGCTGCCCACGACATATGCTTCACGAACACGCTACATTCGTGCTTCTTCGCCCTGGGCAAATGCGTGCCCGTGGTCCGCGGCGCGGGGGTCTACCAGCCCGCGATGGACTTCTGCGTCGAGAGGCTATCCAAAGGCGAATGGGTCCACATCTTTCCCGAGGGACGGGTCAATGTGGAGAAACAGCCCTTGAGGTTTAAGTGGGGCGTTGGAAGGTTGATCGCTGAGAGCCCCAAGGCTCCGCTGATCGTACCGGTTTGGCACGAGGGCCTGGACCGGGTGCTTCCCAACACGGAGCCGTACTTATTAAAATTCAGGAAGAGAGTGTTCCTATGTGTTGGTGAACCTATACAGATGCAGCACTTACTTGATACGTTAAGAAAATCGAATGCAACCGACGAGGAGACAAGGAAAGCGATAACTGATCGCATCCAAGATGAGCTCCTGAGGCTTAGGGATCGGTCCCACGCGCTCATCCGGAGGGCGCTGGGGTCGCACGCCGGCTCGCTACTGGACAACCGCACCGACGTGCAGATGAAGCCGAGCACGGACCAACCTAACGGGAAACACAGTGAAGGTCTAGAGAAAGAATAG
Protein
MSYDIGWIIPRLRNPGRLWYCASSLTVAVVGLFSKIIIEFLNKTTVYNKETLRRAVLRPPGVPLLTISNHHSCFDDPGLWGVLDYVVLLRESRMRWSLAAHDICFTNTLHSCFFALGKCVPVVRGAGVYQPAMDFCVERLSKGEWVHIFPEGRVNVEKQPLRFKWGVGRLIAESPKAPLIVPVWHEGLDRVLPNTEPYLLKFRKRVFLCVGEPIQMQHLLDTLRKSNATDEETRKAITDRIQDELLRLRDRSHALIRRALGSHAGSLLDNRTDVQMKPSTDQPNGKHSEGLEKE

Summary

Description
Essential for the formation of normal cardiolipin (CL). Essential for the final stage of spermatogenesis, spermatid individualization.
Similarity
Belongs to the taffazin family.
Keywords
Alternative splicing   Complete proteome   Membrane   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Tafazzin homolog
splice variant  In isoform B.
EMBL
BABH01035947    RSAL01000017    RVE52925.1    NWSH01006152    PCG63627.1    KZ149965    + More
PZC76198.1    AGBW02010753    OWR47901.1    KQ461184    KPJ07506.1    JTDY01002570    KOB71172.1    KQ459449    KPJ00910.1    GL766194    EFZ15459.1    KQ978060    KYM97729.1    KZ288201    PBC33562.1    KQ981560    KYN39864.1    GL888828    EGI57717.1    GL451712    EFN78704.1    KK852981    KDR12926.1    KQ982116    KYQ59943.1    NNAY01000991    OXU25590.1    KQ976690    KYM78109.1    KQ980800    KYN12944.1    ADTU01012423    QOIP01000005    RLU22883.1    PYGN01000340    PSN48161.1    KK107102    EZA59612.1    KQ434783    KZC04959.1    GL434776    EFN74554.1    KQ435732    KOX77380.1    KQ971354    EFA06877.2    GECZ01005571    JAS64198.1    GEBQ01005585    JAT34392.1    GECU01025475    GECU01017913    JAS82231.1    JAS89793.1    GANO01003938    JAB55933.1    GAMC01014015    GAMC01014012    JAB92540.1    DS235308    EEB14586.1    GBGD01002558    JAC86331.1    GAMC01014014    JAB92541.1    GEZM01033092    JAV84420.1    CP012524    ALC41484.1    AJWK01019415    AJWK01019416    JRES01001578    KNC21862.1    CH963849    EDW73982.1    GDKW01003396    JAI53199.1    ACPB03001635    GEDC01020408    GEDC01019019    JAS16890.1    JAS18279.1    GDHF01013650    GDHF01006118    JAI38664.1    JAI46196.1    GBBI01000335    JAC18377.1    KQ414705    KOC63176.1    GDHF01016098    JAI36216.1    GAKP01011769    GAKP01011767    JAC47183.1    GAKP01011766    JAC47186.1    CH954179    KQS62791.1    CM000071    EAL25843.3    ENO01699.2    GDHF01007400    JAI44914.1    CM000158    KRJ99388.1    KQS62792.1    CH916367    EDW02324.1    GAKP01011768    JAC47184.1    CM000362    CM002911    EDX06830.1    KMY93332.1    KRJ99386.1    KRJ99387.1    ENO01698.1    CH479183    EDW36321.1    EDV56260.1    ATLV01017808    KE525192    KFB42475.1    KMY93329.1    KMY93333.1    AF148684    AE013599    AY071059    AF017783    AAL48681.1    ADV37163.1    GDHF01026857    JAI25457.1    EDW90713.1    GDUN01000682    JAN95237.1    GAPW01002576    JAC11022.1    CH902619    KPU76377.1    BT088982    ACT83761.1    KMY93330.1    CH480816    EDW47623.1    BT132865    AEV12240.1    KMY93331.1    GDHF01003803    JAI48511.1    KQS62793.1    GBXI01008915    GBXI01008387    GBXI01007388    JAD05377.1    JAD05905.1    JAD06904.1    KPU76376.1    AXCM01000512    EDV36712.1    GBHO01035396    GBRD01006374    GDHC01003117    JAG08208.1    JAG59447.1    JAQ15512.1    AXCN02000594    GBXI01007599    JAD06693.1    GFDF01002504    JAV11580.1    AAAB01008807    EAA03923.4   
Pfam
PF01553   Acyltransferase
Interpro
IPR002123   Plipid/glycerol_acylTrfase        + More
IPR000872   Tafazzin       

Ontologies

Topology

Subcellular location
Membrane   Isoforms with hydrophobic N-terminus are thought to be membrane-anchored.   With evidence from 1 publications.
Length:
294
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
15.23801
Exp number, first 60 AAs:
14.84034
Total prob of N-in:
0.49372
POSSIBLE N-term signal
sequence
outside
1  -  294
 
 

Population Genetic Test Statistics

Pi
224.806684
Theta
166.788987
Tajima's D
0.82813
CLR
0.22836
CSRT
0.612419379031048
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号