Gene

KWMTBOMO11230

Pre Gene Modal

BGIBMGA012592

Annotation

PREDICTED:_guanine_nucleotide-binding_protein_subunit_beta-5_[Amyelois_transitella]

Location

Bomo_Chr19(-):1497222-1502584      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.98

CDS

ATGGCGGCCGACACGGCGGTGTCCGCCAGCCCCGAGGAGACTTTGGAGTCCCTGTTACGAGAAGTCGAAGCACTTAAGCAAAAGCTCGAGGAGGAACGCCAGAAACTTAATGATGTCTCGTTATCGAGTATTGCTGAGAAACTGGAGCCCATAACATTCCCAAATCTGAAGTTACGCAGAGTGCTGAAAGGGCACCAGGCTAAAGTATTGTGTTCAGACTGGTGTCCTGATAAGAGACACATTGTTTCCTCTTCACAGGATGGTAAAGTCATAATATGGGATGCATTCAATGCAACCAAAGAATCAACAATCTCAATGCCCAGCACGTGGGTAATGGCTTGTGCCTATGCCCCATCCGGGACATTGATTGCAGCTGGGGGTTTGGACAACAAGGTCACAGTGTTTCCTATAGGAGGAGATGAGGAGCCTGGCGTACGTAAGAGGACTGTGGCCACGCACACGTCGTATATATCGGCCTGCTTGTTCCCAAACACGGACAGGCAACTGCTCACCGGCAGCGGGGATGGTACTTGCGCCTTGTGGGACGTGGAATCAGGGCAGTTGTTGCAGAGTTTCCAGGGTCACGCAGCGGACGTGATGTGCCTGGACCTGGCCCCGTCCGAGATGGGCGACACGTTCGCGTCGGGCTCGTGCGACCGCTCCGCGCTGGTGTGGGACATGCGCACGGGCCAGCCCGTCCAGGCCTTCGACACCCATCTGTCGGACGTGAACGGGGTCAAGTACCACCCGTCCGGCGACTCGATCCTGACGGGCTGCGACGACTCCGTCTGCAGGCTGTTCGACCTGCGGGCGGACCGGGAGGTGGCGCGCTACGGCAAGGACAGCATACTGTTCGGGGTGAACTCGGTGGAGTGGTCGGTGAGCGGGCGGCTGGTGTTCGCGGGCTACAGCGACTACACGGCGGGCGCGTGGGACGCCGTGCGGGCGGCGCGCCTGTGCGTGCTGTGCGGCCACGAGCACCGCGTGGCGCGCCTGCAGCGCTCGCCCGACGGCACGGCGCTCGCCACCGCCTCCTGGGACGCCACCATCAGGATCTGGGCGTAA

Protein

MAADTAVSASPEETLESLLREVEALKQKLEEERQKLNDVSLSSIAEKLEPITFPNLKLRRVLKGHQAKVLCSDWCPDKRHIVSSSQDGKVIIWDAFNATKESTISMPSTWVMACAYAPSGTLIAAGGLDNKVTVFPIGGDEEPGVRKRTVATHTSYISACLFPNTDRQLLTGSGDGTCALWDVESGQLLQSFQGHAADVMCLDLAPSEMGDTFASGSCDRSALVWDMRTGQPVQAFDTHLSDVNGVKYHPSGDSILTGCDDSVCRLFDLRADREVARYGKDSILFGVNSVEWSVSGRLVFAGYSDYTAGAWDAVRAARLCVLCGHEHRVARLQRSPDGTALATASWDATIRIWA

Uniprot

H9JST1   A0A2A4JJA0   A0A2W1BRC0   A0A212F2C3   A0A1E1WCF4   A0A0N1PEL8   + More
A0A0N1I4V2   A0A0L7KYE2   A0A2J7RDU3   A0A0L0C370   D6WR87   A0A0M5JDH0   A0A1I8MPG0   A0A1Y1K6H4   A0A2J7RDU6   B0W655   A0A1Q3F6Z3   B4L8G9   A0A1I8PPH9   A0A1B0G829   A0A1A9XA06   A0A1A9VWS3   A0A1B0AXY0   A0A182FLY1   B4MSE8   A0A1A9X5P6   E0VQ40   A0A1W4VJ92   B4R6G5   B4Q0F0   B4IKX8   B3NX03   Q9W3J1   Q16TZ3   A0A182G998   W5JBI9   A0A067QMQ6   A0A2M4BSG6   A0A3B0K3Z4   A0A182QN27   B3MRL6   A0A182W7X5   Q29HD3   B4GXW3   A0A182JLT0   B4M200   W8BW82   A0A182NP72   A0A1B6D8A7   A0A182M1L3   A0A182YDY0   A0A182GZK1   A0A182RS99   A0A1S4H3M9   A0A0K8UYT3   A0A034W9L7   B4JNQ0   A0A1B6FGD5   A0A1B6K5V6   A0A1Y1K6B2   A0A1B6LJB6   A0A182K3Q8   A0A084VJI1   A0A224YYG3   A0A131YW79   A0A0M9A8X2   A0A1E1X289   A0A131XLR3   A0A023F4F6   A0A087ZQN4   A0A1J1IN35   A0A0L7QY26   J9JU95   A0A154P8U4   A0A2R5LJK4   U5EZ09   A0A182KY22   A0A182ICL7   A0A182XQ43   V5HHH2   A0A182TMN3   A0A2A3E5M9   T1JEV6   J3JTJ6   A0A164LKU2   E9J3G4   A0A2H1VZ39   E9FT66   A0A0C9R4R3   A0A232FBT3   K7IZG3   A0A026W7X4   A0A182VJD4   A0A151J3M3   F4WQL4   A0A195CTH9   S4PTB3   A0A151WGV2   A0A0J7K9F0   E2ACT2  

Pubmed

19121390    28756777    22118469    26354079    26227816    26108605    + More
18362917    19820115    25315136    28004739    17994087    20566863    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17510324    26483478    20920257    23761445    24845553    15632085    24495485    25244985    12364791    25348373    24438588    28797301    26830274    28503490    28049606    25474469    20966253    25765539    22516182    21282665    21292972    28648823    20075255    24508170    30249741    21719571    23622113    20798317   

EMBL

BABH01035942    NWSH01001223    PCG72051.1    KZ149965    PZC76194.1    AGBW02010753    + More
OWR47895.1    GDQN01006394    JAT84660.1    KQ459449    KPJ00917.1    KQ461184    KPJ07501.1    JTDY01004504    KOB68069.1    NEVH01005284    PNF39000.1    JRES01000955    KNC26775.1    KQ971354    EFA05995.1    CP012528    ALC48668.1    GEZM01091257    JAV56983.1    PNF39001.1    DS231847    EDS36402.1    GFDL01011746    JAV23299.1    CH933815    EDW07944.1    CCAG010000157    JXJN01005456    CH963851    EDW75037.1    DS235389    EEB15496.1    CM000366    EDX17395.1    CM000162    EDX02287.1    CH480859    EDW52749.1    CH954180    EDV46832.1    AE014298    BT004841    AAF46336.1    AAO45197.1    CH477636    EAT38001.1    JXUM01153756    KQ571785    KXJ68112.1    ADMH02001606    ETN61837.1    KK853243    KDR09453.1    GGFJ01006859    MBW56000.1    OUUW01000016    SPP88885.1    AXCN02002423    CH902622    EDV34421.1    CH379064    EAL31826.1    CH479196    EDW27590.1    AXCP01007713    CH940651    EDW65704.1    GAMC01003093    JAC03463.1    GEDC01016415    GEDC01015365    JAS20883.1    JAS21933.1    AXCM01000973    JXUM01099675    KQ564510    KXJ72155.1    AAAB01008985    GDHF01020809    JAI31505.1    GAKP01007940    JAC51012.1    CH916371    EDV92343.1    GECZ01020501    JAS49268.1    GECU01000860    JAT06847.1    GEZM01091250    JAV56992.1    GEBQ01016239    JAT23738.1    ATLV01013578    ATLV01013579    KE524868    KFB38125.1    GFPF01008227    MAA19373.1    GEDV01005113    JAP83444.1    KQ435724    KOX78343.1    GFAC01005815    JAT93373.1    GEFH01001084    JAP67497.1    GBBI01002302    JAC16410.1    CVRI01000054    CRK99889.1    KQ414699    KOC63449.1    ABLF02029695    KQ434846    KZC08319.1    GGLE01005550    MBY09676.1    GANO01001640    JAB58231.1    APCN01008747    GANP01001358    JAB83110.1    KZ288386    PBC26479.1    JH432130    BT126553    AEE61517.1    LRGB01003123    KZS04209.1    GL768066    EFZ12582.1    ODYU01005342    SOQ46088.1    GL732524    EFX89319.1    GBYB01002960    JAG72727.1    NNAY01000510    OXU27923.1    KK107348    QOIP01000010    EZA52155.1    RLU17450.1    KQ980275    KYN17040.1    GL888274    EGI63504.1    KQ977279    KYN04003.1    GAIX01012338    JAA80222.1    KQ983140    KYQ47073.1    LBMM01011287    KMQ86914.1    GL438574    EFN68760.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000235965    UP000037069    UP000007266    UP000092553    UP000095301    UP000002320    UP000009192    UP000095300    UP000092444    UP000092443    UP000078200    UP000092460    UP000069272    UP000007798    UP000091820    UP000009046    UP000192221    UP000000304    UP000002282    UP000001292    UP000008711    UP000000803    UP000008820    UP000069940    UP000249989    UP000000673    UP000027135    UP000268350    UP000075886    UP000007801    UP000075920    UP000001819    UP000008744    UP000075880    UP000008792    UP000075884    UP000075883    UP000076408    UP000075900    UP000001070    UP000075881    UP000030765    UP000053105    UP000005203    UP000183832    UP000053825    UP000007819    UP000076502    UP000075882    UP000075840    UP000076407    UP000075902    UP000242457    UP000076858    UP000000305    UP000215335    UP000002358    UP000053097    UP000279307    UP000075903    UP000078492    UP000007755    UP000078542    UP000075809    UP000036403    UP000000311   

PRIDE

H9JST1    Q9W3J1   

Pfam

PF00400   WD40

Interpro

IPR020472   G-protein_beta_WD-40_rep        + More
IPR016346   Guanine_nucleotide-bd_bsu       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001632   Gprotein_B       
IPR001680   WD40_repeat       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JST1   A0A2A4JJA0   A0A2W1BRC0   A0A212F2C3   A0A1E1WCF4   A0A0N1PEL8   + More
A0A0N1I4V2   A0A0L7KYE2   A0A2J7RDU3   A0A0L0C370   D6WR87   A0A0M5JDH0   A0A1I8MPG0   A0A1Y1K6H4   A0A2J7RDU6   B0W655   A0A1Q3F6Z3   B4L8G9   A0A1I8PPH9   A0A1B0G829   A0A1A9XA06   A0A1A9VWS3   A0A1B0AXY0   A0A182FLY1   B4MSE8   A0A1A9X5P6   E0VQ40   A0A1W4VJ92   B4R6G5   B4Q0F0   B4IKX8   B3NX03   Q9W3J1   Q16TZ3   A0A182G998   W5JBI9   A0A067QMQ6   A0A2M4BSG6   A0A3B0K3Z4   A0A182QN27   B3MRL6   A0A182W7X5   Q29HD3   B4GXW3   A0A182JLT0   B4M200   W8BW82   A0A182NP72   A0A1B6D8A7   A0A182M1L3   A0A182YDY0   A0A182GZK1   A0A182RS99   A0A1S4H3M9   A0A0K8UYT3   A0A034W9L7   B4JNQ0   A0A1B6FGD5   A0A1B6K5V6   A0A1Y1K6B2   A0A1B6LJB6   A0A182K3Q8   A0A084VJI1   A0A224YYG3   A0A131YW79   A0A0M9A8X2   A0A1E1X289   A0A131XLR3   A0A023F4F6   A0A087ZQN4   A0A1J1IN35   A0A0L7QY26   J9JU95   A0A154P8U4   A0A2R5LJK4   U5EZ09   A0A182KY22   A0A182ICL7   A0A182XQ43   V5HHH2   A0A182TMN3   A0A2A3E5M9   T1JEV6   J3JTJ6   A0A164LKU2   E9J3G4   A0A2H1VZ39   E9FT66   A0A0C9R4R3   A0A232FBT3   K7IZG3   A0A026W7X4   A0A182VJD4   A0A151J3M3   F4WQL4   A0A195CTH9   S4PTB3   A0A151WGV2   A0A0J7K9F0   E2ACT2  

PDB

6N9G     E-value=2.02313e-129,     Score=1183

KEGG

101747045    K12616 enhancer of mRNA-decapping protein 4 | (RefSeq) enhancer of mRNA-decapping protein 4-like

PATHWAY

03018    RNA degradation - Bombyx mori (domestic silkworm)

GO

GO:0007165   GO:0004402   GO:0005886   GO:0007186   GO:0005515   GO:0005549   GO:0007608   GO:0016020   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

PANTHER

PTHR19850  

Length:

354

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.44631

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03932

outside

1  -  354

 

 

Pi

36.393937

Theta

150.654912

Tajima's D

-1.596952

CLR

452.364865

CSRT

0.0499475026248688

Interpretation

Uncertain