Gene

KWMTBOMO11229  Validated by peptides from experiments

Annotation

PREDICTED:_basigin_[Bombyx_mori]

Location

Bomo_Chr19(-):1474892-1490804      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.09

CDS

ATGAAAGTGAAAATAGTGAAAAATATAACTATGCGATCTCAACTGTGTTTGCCTTTATCTCTTCTATTTTTAGCCTGCGGAGTTCTTACGAGTGCCCAAAACTCGTCAACGATTGCTCCGGTCACCGAGCCCACCCAAGAACTGGTCAATTATGAGGCCTTGAAGTACATCGTTGGACGCCCGTTCAATTTGAATTGCACTCTCGCCGTGCCACTGGATTCGTTTGAGATCGTATGGAAGAAGAACAGCGTGCCTCTCGGCGAGGTGGCCGGCCTCAAGGAGCGGTACGAGCTCCAGAACAAGGGGCTCACCTTCCAGATCAAGGGCCGCAGTAACGAGGACGACTACGGCAACTACACGTGCGGCCTCAAGAACCAAACGGGACATATCAAAGCCTGGATGGTCACGGGAAACGTGCACGCCAAGATGACCAAGGACGCCAACGTGGTCGAGGGACAGAACATTAAGATCACTTGCAAGTTGATCGGCAAGCCGTACTCTGAGGTGACGTGGAAGTACAAGAAGGACGAGTTGGACAACGGCACGGACGTGAGCGCGGTGCTGGGCAGTCGCGTGCAGCTGGAGAAGAACGAGCAGGGCCTGGACAACACCGTGCTGGTGCTGCAGAACGCGGAGCGCGCCGACGCCGGCCTGTACCAGTGCAGCCCGGCCGGGGGCACGCCCGCCGACGTCACGCTCAGGGTCAAGGGCGTGTACGACGCGCTCTGGCCCTTCCTCGGCATCTGCGCGGAGGTCGTGGTGCTCTGCGCCGTCATACTCTTCTACGAGAAGAGGAGGACCAAGCCCGAGCTCGACGACTCCGACACCGACAACCACGACCAGAAGAAGTCGTAG

Protein

MKVKIVKNITMRSQLCLPLSLLFLACGVLTSAQNSSTIAPVTEPTQELVNYEALKYIVGRPFNLNCTLAVPLDSFEIVWKKNSVPLGEVAGLKERYELQNKGLTFQIKGRSNEDDYGNYTCGLKNQTGHIKAWMVTGNVHAKMTKDANVVEGQNIKITCKLIGKPYSEVTWKYKKDELDNGTDVSAVLGSRVQLEKNEQGLDNTVLVLQNAERADAGLYQCSPAGGTPADVTLRVKGVYDALWPFLGICAEVVVLCAVILFYEKRRTKPELDDSDTDNHDQKKS

Uniprot

A0A2W1BRF1   A0A3B0E3L9   A0A212F2E6   A0A0N1IN03   A0A0N1PHP0   A0A0Q9WS22   + More
A0A1B6FKJ1   B3MMX2   A0A1B6M8H5   A0A1W4WZJ0   A0A1Y1LSW9   A0A1B6LW55   T1E289   A0A0Q5WBY4   A0A0J9QXX0   U5EQY7   T1DEN1   A0A2J7R3K5   Q16ML7   T1D4G7   Q16ML6   Q961I4   A0A0J9QZ03   A0A023ENP6   Q8IPG9   A0A0J9QYA8   A0A0J9TIG8   D3TLY5   B4HYE5   M9PCW5   Q7KTJ7   A0A2M4ABL6   A0A2M4AB32   A0A182PLT5   A0A2M4DNX6   A0A2M4DMI6   A0A0J9QXT7   N6SRJ7   A0A2M4AB34   A0A2M4AAX2   A0A2P6LA76   V5GVB3   A0A0A1XRN1   A0A182XFV9   A0A0J9QYA0   T1DHN0   A0A0J9TIH2   A0A0A9W6U6   A0A2M4DMK3   A0A1L8DA04   A0A1S4GY62   A0A1B6D4E0   E0VQ49   A0A1W7RA30   A0A182F3H9   A0A1B6DMQ0   A0A2M3Z483   A0A1Q3G3R7   A0A2M4DMQ8   A0A0A9X5C1   D6WQV4   A0A1Q3FY83   A0A1Q3FYB0   A0A2M3ZE27   A0A0N8ES29   A0A1W4VWC6   A0A0R1DT06   A0A1I8NUC4   Q29L42   A0A1Q3FY55   A0A0M4E994   W8AD12   A0A2M4BVQ8   A0A2M4BWT8   A0A224YVE7   A0A0K8RFE5   R4WD95   A0A0K8UG24   Q7Q4I1   A0A336LT56   B4KEC5   L7MBI1   A0A2S2R9Q4   L7MHV3   A0A1V9XKW6   A0A2C9GPZ7   B7QIE6   A0A3L8DRF8   A0A2C9GQ66   A0A087UAU7   A0A026WUC4   A0A182MYY3   A0A2C9GQ04   A0A182L0G9   L7M0I3  

Pubmed

28756777    22118469    26354079    17994087    18057021    28004739    + More
24330624    22936249    17510324    24945155    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    23537049    25830018    25401762    26823975    12364791    20566863    18362917    19820115    26999592    17550304    15632085    24495485    28797301    23691247    25576852    28327890    30249741    24508170    20966253   

EMBL

KZ149965    PZC76195.1    RBVL01000249    RKO10146.1    AGBW02010753    OWR47894.1    + More
KQ459449    KPJ00918.1    KQ461184    KPJ07500.1    CH963857    KRF98397.1    GECZ01019256    JAS50513.1    CH902620    EDV30997.2    KPU73178.1    KPU73179.1    GEBQ01007823    JAT32154.1    GEZM01049149    JAV76071.1    GEBQ01012072    JAT27905.1    GALA01000954    JAA93898.1    CH954177    KQS70735.1    KQS70736.1    KQS70737.1    KQS70738.1    KQS70739.1    KQS70740.1    KQS70741.1    CM002910    KMY88927.1    GANO01003997    JAB55874.1    GALA01000967    JAA93885.1    NEVH01007819    PNF35400.1    CH477858    EAT35573.1    GALA01000968    JAA93884.1    EAT35571.1    EAT35572.1    EAT35574.1    AY051571    AAK92995.1    KMY88918.1    KMY88919.1    KMY88921.1    KMY88923.1    GAPW01003042    GEHC01001388    JAC10556.1    JAV46257.1    AE014134    BT005198    BT006333    AAN10653.1    AAN10654.1    AAN10655.1    AAN10656.1    AAN10657.1    AAN10658.1    AAN10659.1    AAN10660.1    AAO61755.1    AAP20829.1    KMY88928.1    KMY88920.1    KMY88922.1    KMY88924.1    EZ422437    ADD18713.1    CH480818    EDW52075.1    AGB92760.1    AAN10661.2    GGFK01004687    MBW38008.1    GGFK01004674    MBW37995.1    GGFL01014640    MBW78818.1    GGFL01014602    MBW78780.1    KMY88917.1    APGK01059412    KB741293    KB632046    ENN70239.1    ERL88250.1    GGFK01004601    MBW37922.1    GGFK01004606    MBW37927.1    MWRG01000736    PRD35473.1    GALX01004293    JAB64173.1    GBXI01000660    JAD13632.1    KMY88926.1    GAMD01002256    JAA99334.1    KMY88925.1    GBHO01041381    GBRD01012929    GDHC01008080    JAG02223.1    JAG52897.1    JAQ10549.1    GGFL01014604    MBW78782.1    GFDF01010924    JAV03160.1    AAAB01008964    GEDC01016729    JAS20569.1    DS235389    EEB15505.1    GFAH01000388    JAV48001.1    GEDC01010337    JAS26961.1    GGFM01002575    MBW23326.1    GFDL01000597    JAV34448.1    GGFL01014641    MBW78819.1    GBHO01029439    GBHO01027677    GDHC01020275    JAG14165.1    JAG15927.1    JAP98353.1    KQ971351    EFA06512.2    GFDL01002539    JAV32506.1    GFDL01002528    JAV32517.1    GGFM01006035    MBW26786.1    GDUN01000618    JAN95301.1    CM000157    KRJ97791.1    KRJ97792.1    KRJ97793.1    KRJ97794.1    KRJ97796.1    KRJ97797.1    KRJ97798.1    CH379061    EAL32982.2    GFDL01002560    JAV32485.1    CP012523    ALC38726.1    GAMC01020680    JAB85875.1    GGFJ01008016    MBW57157.1    GGFJ01008047    MBW57188.1    GFPF01008563    MAA19709.1    GADI01004007    JAA69801.1    AK417493    BAN20708.1    GDHF01026700    JAI25614.1    EAA12759.4    UFQS01000180    UFQT01000180    SSX00826.1    SSX21206.1    CH933807    EDW12893.2    GACK01004491    JAA60543.1    GGMS01017526    MBY86729.1    GACK01002275    JAA62759.1    MNPL01008544    OQR74180.1    APCN01000774    ABJB010175462    ABJB010273414    ABJB010820902    DS945857    EEC18618.1    QOIP01000005    RLU22378.1    KK119043    KFM74486.1    KK107102    EZA59607.1    GACK01008396    JAA56638.1   

Proteomes

UP000276569    UP000007151    UP000053268    UP000053240    UP000007798    UP000007801    + More
UP000192223    UP000008711    UP000235965    UP000008820    UP000000803    UP000001292    UP000075885    UP000019118    UP000030742    UP000076407    UP000009046    UP000069272    UP000007266    UP000192221    UP000002282    UP000095300    UP000001819    UP000092553    UP000007062    UP000009192    UP000192247    UP000075840    UP000001555    UP000279307    UP000054359    UP000053097    UP000075884    UP000075882   

PRIDE

Q961I4    M9PCW5    Q7KTJ7    L7MBI1    L7MHV3    L7M0I3    + More

Pfam

PF00047   ig        + More
PF07679   I-set

Interpro

IPR003599   Ig_sub        + More
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR013098   Ig_I-set       
IPR013151   Immunoglobulin       
IPR013106   Ig_V-set       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2W1BRF1   A0A3B0E3L9   A0A212F2E6   A0A0N1IN03   A0A0N1PHP0   A0A0Q9WS22   + More
A0A1B6FKJ1   B3MMX2   A0A1B6M8H5   A0A1W4WZJ0   A0A1Y1LSW9   A0A1B6LW55   T1E289   A0A0Q5WBY4   A0A0J9QXX0   U5EQY7   T1DEN1   A0A2J7R3K5   Q16ML7   T1D4G7   Q16ML6   Q961I4   A0A0J9QZ03   A0A023ENP6   Q8IPG9   A0A0J9QYA8   A0A0J9TIG8   D3TLY5   B4HYE5   M9PCW5   Q7KTJ7   A0A2M4ABL6   A0A2M4AB32   A0A182PLT5   A0A2M4DNX6   A0A2M4DMI6   A0A0J9QXT7   N6SRJ7   A0A2M4AB34   A0A2M4AAX2   A0A2P6LA76   V5GVB3   A0A0A1XRN1   A0A182XFV9   A0A0J9QYA0   T1DHN0   A0A0J9TIH2   A0A0A9W6U6   A0A2M4DMK3   A0A1L8DA04   A0A1S4GY62   A0A1B6D4E0   E0VQ49   A0A1W7RA30   A0A182F3H9   A0A1B6DMQ0   A0A2M3Z483   A0A1Q3G3R7   A0A2M4DMQ8   A0A0A9X5C1   D6WQV4   A0A1Q3FY83   A0A1Q3FYB0   A0A2M3ZE27   A0A0N8ES29   A0A1W4VWC6   A0A0R1DT06   A0A1I8NUC4   Q29L42   A0A1Q3FY55   A0A0M4E994   W8AD12   A0A2M4BVQ8   A0A2M4BWT8   A0A224YVE7   A0A0K8RFE5   R4WD95   A0A0K8UG24   Q7Q4I1   A0A336LT56   B4KEC5   L7MBI1   A0A2S2R9Q4   L7MHV3   A0A1V9XKW6   A0A2C9GPZ7   B7QIE6   A0A3L8DRF8   A0A2C9GQ66   A0A087UAU7   A0A026WUC4   A0A182MYY3   A0A2C9GQ04   A0A182L0G9   L7M0I3  

PDB

4U0Q     E-value=3.47232e-13,     Score=180

KEGG

101747153    no KO assigned | (RefSeq) basigin

GO

GO:0016021   GO:0048788   GO:0098609   GO:0008594   GO:0072659   GO:0051647   GO:0051643   GO:0051646   GO:0045214   GO:0005886   GO:0048786   GO:0007156   GO:0030424   GO:0007411   GO:0098632   GO:0070593   GO:0005515   GO:0005549   GO:0007608   GO:0016020   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

SignalP

Position:   1 - 32,         Likelihood:  0.962186

 

 

Length:

284

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

32.824

Exp number, first 60 AAs:

11.47796

Total prob of N-in:

0.66419

POSSIBLE N-term signal

sequence

outside

1  -  240

TMhelix

241  -  263

inside

264  -  284

 

 

Pi

188.682374

Theta

182.161127

Tajima's D

-0.860792

CLR

0.87125

CSRT

0.165441727913604

Interpretation

Uncertain