SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11224
Pre Gene Modal
BGIBMGA012608
Annotation
PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.901
 

Sequence

CDS
ATGCCAGCGTTATTCAAATTTGACAATTACGAAGAATGCTTGAGCAAGCCAGAAGGGATATACTGTACTACCAAATTTGAAATTATAAAGATTACGCCAAACCCCGTTTATGATATGATAGTTGAATTTTCCAAGCACACCGTGAAACATTACAATCATTCTAAGCTTTTCTACGGTGTGTGCTTGTCTGATAATCGTAACCAAACAAATATTTCAACGTGGGACCTGAAACAGAGCGTTGAGGCCCGTCTCAACGAATCGTTTTGGTCCGAGCATCGCTTGAGAACAAAAATCACCGATATATCGTGTTCCAATGAGAAGGAAGATTATAAGTTGGATATCGGTGACGTAATTGTTGGCACCGCCTGTCTTATTTTAGTTCTACTGAACGTCGTTGCAAGTTTTTGTGATTTATACTTCGGTGATGAAAATAATAAAAGCCCGGAATGGTACCACTATTTTTCAATACGATGCAACTGGCGTAGGCTGATGGAGCCATTTGACGAGACCAACCCGCGGCTTCGTCCACTGAAATGTTTGAACGGTTTAAGGAGTGTATTAATGTGTTTGGTGATATTGATACACACGAGCGTCCCAGTCTTCGTGTGTAACAATAATCCTAGATATTTGGAGCAGTGGTTTGACAATATTTACTACCATCTACTGTTCAACGCTACCTTTATAATGCAGATTTTCATTGTAATATCGGGATTCCTGTTAATATACAACCAGCAAATATCTGATGAAAGTAATGAAATTAGCTGGAAAATTTTACCAAAACGGACTTTAGAGAGATGGTTGCGGCTTACACCGCCGTATGCCGTAATATTGGCGCTGACCGCGACTTGGTTCAGACATGTCGGTTCAGGACCATTCTGGCCTGAGGTCGCCGGGTCCGAAATACGTGATTGCAGAAGATATTGGTGGCAACATCTCTTGTACATCCACAACTACAGTAACGAATCAGACTGCACGATACAATCTTGGTACATAGCCGCTGATATGCAGCTGTTCATTTTCGGATTAATCATCTATCTGGCCTGCCGAACTCCGAGGTCTAGGAAGATAGTCCTTCCCACTTTTTTCTTTATAGGCATCGCCATAGTAGCCGCTCACACGTACTTAGAAAACTTGGATGGAACCGTCATTTGCACTCCTGAAGTCATTCGCAACCAAATCAGGATAGACCCGACGTTCTTAAAAGTCTACAGACGAAGTCACACTAATATACCCTGTTACATTCTGGGGATGGGTGCAGGATACCTGTTTTACTATTGGCAGAAGATTAACCTGAATTTGGATAAAATTAAGAAATATAAAATGCTCTGCTGGATGCTTGGTCCGCTGCCAGTAGTCCTGGGTTCTGGCATAATGGTCATGGCCTCGTATTTCTACATGGACGCGCCAAGGTCTTCAGTCATGTTGAGAACAATGTACGCTGCAACTGCGAAACCTGTTTTTGGATTACTGTTCACAGTACTTATATGCGCAATGATCATGAAACTTGAAAACGTCTTCCGTACAATATTCGAGTGGGATTGTTGGTCGATCGTGGCGCGTCTATCGTACTGCGCCTACAATATCCATGTGACCATTATTCGGTACACCGCATCACTGTCCACCGTTCCTTTCCAACAATCGATTATGGCTATGGTTCAGTACTACATTTTCATCCTGGTCGTCTCTTTGCTTCTCTCCATTCCGCTTTGGTTGCTGGTTGAAGAACCGATGAACCGAGTGTGGAAATTATATCTAAGATCTTCCTCTAAGACGACTCAGGTGCAGGAGAAAATTAAGCTGAAATAG
Protein
MPALFKFDNYEECLSKPEGIYCTTKFEIIKITPNPVYDMIVEFSKHTVKHYNHSKLFYGVCLSDNRNQTNISTWDLKQSVEARLNESFWSEHRLRTKITDISCSNEKEDYKLDIGDVIVGTACLILVLLNVVASFCDLYFGDENNKSPEWYHYFSIRCNWRRLMEPFDETNPRLRPLKCLNGLRSVLMCLVILIHTSVPVFVCNNNPRYLEQWFDNIYYHLLFNATFIMQIFIVISGFLLIYNQQISDESNEISWKILPKRTLERWLRLTPPYAVILALTATWFRHVGSGPFWPEVAGSEIRDCRRYWWQHLLYIHNYSNESDCTIQSWYIAADMQLFIFGLIIYLACRTPRSRKIVLPTFFFIGIAIVAAHTYLENLDGTVICTPEVIRNQIRIDPTFLKVYRRSHTNIPCYILGMGAGYLFYYWQKINLNLDKIKKYKMLCWMLGPLPVVLGSGIMVMASYFYMDAPRSSVMLRTMYAATAKPVFGLLFTVLICAMIMKLENVFRTIFEWDCWSIVARLSYCAYNIHVTIIRYTASLSTVPFQQSIMAMVQYYIFILVVSLLLSIPLWLLVEEPMNRVWKLYLRSSSKTTQVQEKIKLK

Summary

Catalytic Activity
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.
EMBL
KQ459053    KPJ04119.1    ODYU01007420    SOQ50171.1    KZ150085    PZC73777.1    + More
NWSH01001633    PCG70632.1    KZ150068    PZC74095.1    KPJ04116.1    AGBW02012502    OWR44975.1    SOQ50170.1    NWSH01001667    PCG70472.1    AGBW02015045    OWR40663.1    SOQ50173.1    KPJ04118.1    RSAL01000205    RVE44373.1    KQ459449    KPJ00879.1    PZC74094.1    JTDY01004025    KOB68696.1    KPJ00868.1    KQ461073    KPJ09500.1    KQ461184    KPJ07529.1    KPJ07525.1    BABH01038834    KPJ07535.1    KPJ00884.1    PCG70631.1    GEZM01074205    GEZM01074204    JAV64641.1    BABH01004270    BABH01004271    SOQ50174.1    ODYU01007576    SOQ50462.1    JX846987    AGG55004.1    JTDY01003022    KOB70291.1    NWSH01000045    PCG80260.1    KQ460635    KPJ13420.1    KZ149997    PZC75398.1    KPJ04127.1    AGBW02008687    OWR52781.1    GEZM01042633    JAV79751.1    KZ150097    PZC73595.1    AXCN02000449    DS232017    EDS31995.1    NEVH01017478    PNF24171.1    AAAB01008807    EDO64708.1    EDO64706.1    NWSH01000169    PCG78819.1    AE013599    AAF57404.4    EDO64707.1    AGBW02007654    OWR54851.1    EDO64709.1    KPJ09497.1    ODYU01009435    SOQ53859.1    EAA03947.5    GAKP01011630    JAC47322.1    APCN01000148    APCN01000149    GDHF01008758    JAI43556.1    AXCN02000448    PCG70475.1    BABH01025581    GBXI01015426    JAC98865.1    AXCM01001275    JXUM01076912    JXUM01076913    JXUM01076914    JXUM01076915    KQ562977    KXJ74719.1    CM000362    EDX05929.1    CH477678    EAT37346.1    CM002911    KMY91834.1    KQ459582    KPI98970.1    EAU77672.2    APCN01000146    AXCM01001276    AXCM01001277    GEZM01096350    JAV54960.1    CH478459    EAT32956.1    CH478446    EAT32978.1   
Pfam
PF01757   Acyl_transf_3        + More
PF04488   Gly_transf_sug
PF02958   EcKinase
PF00632   HECT
PF00397   WW
PF00168   C2
Interpro
IPR002656   Acyl_transf_3        + More
IPR007577   GlycoTrfase_DXD_sugar-bd_CS       
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       
IPR015897   CHK_kinase-like       
IPR000569   HECT_dom       
IPR035983   Hect_E3_ubiquitin_ligase       
IPR035892   C2_domain_sf       
IPR036020   WW_dom_sf       
IPR001202   WW_dom       
IPR000008   C2_dom       
SUPFAM
SSF56112   SSF56112        + More
SSF56204   SSF56204       
SSF51045   SSF51045       
Gene 3D

Ontologies

Topology

Length:
601
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
231.19298
Exp number, first 60 AAs:
0.00108
Total prob of N-in:
0.03290
outside
1  -  113
TMhelix
114  -  136
inside
137  -  179
TMhelix
180  -  202
outside
203  -  216
TMhelix
217  -  239
inside
240  -  265
TMhelix
266  -  284
outside
285  -  324
TMhelix
325  -  347
inside
348  -  355
TMhelix
356  -  375
outside
376  -  406
TMhelix
407  -  426
inside
427  -  441
TMhelix
442  -  464
outside
465  -  478
TMhelix
479  -  501
inside
502  -  513
TMhelix
514  -  536
outside
537  -  550
TMhelix
551  -  573
inside
574  -  601
 
 

Population Genetic Test Statistics

Pi
187.715462
Theta
169.279439
Tajima's D
-0.794671
CLR
0.470882
CSRT
0.180890955452227
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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