Gene

KWMTBOMO11223  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012594

Annotation

cuticular_protein_RR-1_motif_19_precursor_[Bombyx_mori]

Location

Bomo_Chr19(-):1354164-1359395      View in EpiBrowser

Full name

Cuticle protein 3       + More
Cuticle protein 2      
Pupal cuticle protein 27      

Alternative Name

MS-PCP27

Location in the cell

Extracellular   Reliability : 2.008

CDS

ATGAATATCATCTTCGCAGCCTTTATTGGTGTGTGCGCCGCGGGTGCCCTCCCAGCGTACGTCCCTCCTCAATACCGCTTTTCGCCGGCTTATTACCAGGACGGTAGAGCCAGGTCATCCTTGGAGGGGGGCGCCGCTATCTTGAGGTCGGAATCAGAAGTCAACGAACAGGGCTTCCACTACGCTTACGATACAGAGAACGGTATTTCTGCTGAGGCTTCAGGAGTTGAAGCTAATGGCATCCAGTCCCAGGGTCGTTTCTCTTACACCGGTGACGACGGTCAGGTTTACGCCGTGACCTACACTGCTGACGCTAATGGCTATCAGCCTCAGGGCTCTCACCTGCCCACCCCTCCGCCCATCCCGGAAGCCATCGCCAGGTCTCTACAAGAGAACGCCAGAGACGAGGCAGCCGGTATTTTCGATGATGGAAGCTACCGCGACGCTAAATACGAACCTGCCGTGATTGCTGCCCGAGCCCAGTATCCCTACGCGAAAGGGCAGTACGTGAACCCTGCCTTCCGTCGCTTCTACAAATACTAG

Protein

MNIIFAAFIGVCAAGALPAYVPPQYRFSPAYYQDGRARSSLEGGAAILRSESEVNEQGFHYAYDTENGISAEASGVEANGIQSQGRFSYTGDDGQVYAVTYTADANGYQPQGSHLPTPPPIPEAIARSLQENARDEAAGIFDDGSYRDAKYEPAVIAARAQYPYAKGQYVNPAFRRFYKY

Description

Component of the pupal abdominal endocuticle. May have important role in the pharate pupal cuticle structure.

Keywords

Cuticle   Direct protein sequencing   Signal  

Feature

chain  Cuticle protein 3

Uniprot

C0H6L0   P85197   A0A2A4JNS7   A0A2W1BSI1   A0A194R0Z3   A0A212FLX8   + More
A0A194QKY2   A0A2H1VAQ9   P85196   I4DM91   A0A212FLY9   A0A2H1VAQ8   B2DBL5   B2DBH1   I4DLW1   A0A0L7LC25   A0A2A4K1W4   I4DIQ6   A0A194QW22   A0A2W1BSL4   A0A2W1BWQ5   C0H6K7   A0A212FLX3   Q8T4J9  

Pubmed

19121390    19280704    18342903    28756777    26354079    22118469    + More
22651552    18712529    26227816    12609518    10646967   

EMBL

BABH01035929    BR000520    FAA00521.1    EU106114    ABU88846.1    NWSH01001021    + More
PCG73070.1    KZ149913    PZC78042.1    KQ461073    KPJ09511.1    AGBW02007689    OWR54753.1    KQ459053    KPJ04106.1    ODYU01001547    SOQ37928.1    EU106116    ABU88848.1    AK402409    BAM19031.1    OWR54751.1    SOQ37925.1    AB264699    BAG30774.1    AB264651    BAG30730.1    AK402279    BAM18901.1    JTDY01001769    KOB72940.1    NWSH01000264    PCG77894.1    AK401174    BAM17796.1    KPJ09509.1    PZC78049.1    PZC78054.1    BABH01035926    BR000517    FAA00518.1    OWR54745.1    AY083171    AAL92478.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000037510    + More

PRIDE

C0H6L0    C0H6K7   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6L0   P85197   A0A2A4JNS7   A0A2W1BSI1   A0A194R0Z3   A0A212FLX8   + More
A0A194QKY2   A0A2H1VAQ9   P85196   I4DM91   A0A212FLY9   A0A2H1VAQ8   B2DBL5   B2DBH1   I4DLW1   A0A0L7LC25   A0A2A4K1W4   I4DIQ6   A0A194QW22   A0A2W1BSL4   A0A2W1BWQ5   C0H6K7   A0A212FLX3   Q8T4J9  

KEGG

100379447    no KO assigned | (RefSeq) CPR19, BmorCPR19; cuticular protein RR-1 motif 19

GO

GO:0042302   GO:0016021   GO:0005549   GO:0007608   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

SignalP

Position:   1 - 16,         Likelihood:  0.941353

 

 

Length:

180

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

14.56704

Exp number, first 60 AAs:

14.56646

Total prob of N-in:

0.49810

POSSIBLE N-term signal

sequence

outside

1  -  180

 

 

Pi

238.047342

Theta

160.129959

Tajima's D

1.587499

CLR

0.702062

CSRT

0.806109694515274

Interpretation

Uncertain