Gene

KWMTBOMO11221  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012596

Annotation

cuticular_protein_RR-1_motif_17_precursor_[Bombyx_mori]

Location

Bomo_Chr19(-):1302967-1315155      View in EpiBrowser

Full name

Cuticle protein 3       + More
Cuticle protein 2      
Pupal cuticle protein 27      

Alternative Name

MS-PCP27

Location in the cell

Extracellular   Reliability : 1.813

CDS

ATGCAATTGTTAGTGATCTCCGCTCTTTTCGGGCTGGCTGCCGCTGCTTACTCACCAGCTTACCCCGAGCAGTCGAACCGCCCTCAGGCTTCCTTCGAGAAGAACGCCAGAATCCTCGCCTTGGACTCTGATGTCAAAGAAGACTCCTTCAGATACAACTATGAAACGGAAAACGGCATCAAGGCTGAGGAACAAGGTCGCGAGGTCGACGGCATCGAAGCTCAAGGAGGTTTCCAATACACTGGCGATGATGGTCAAGTTTATGCTATCAGCTACGCAGCTGGTCAAGGCGGTTTCCAGGCCCAGGGCGCTCACATCCCTACTGCTCCCCCCACTCCTGAAGCTATCCTGAAGGCTTTGGAGCAGAACGCCCGAGATGAGGCCGCTGGCATCATCGATGACGGCCAGTACAACCCTGGAAAATACGGTGACGCTAGTTTCCCCCAGCAGCAGTACAGAGCGCAGGCCCAAGCGTCAGCCAGCTACAGACAGCCCTACAAGTACTAA

Protein

MQLLVISALFGLAAAAYSPAYPEQSNRPQASFEKNARILALDSDVKEDSFRYNYETENGIKAEEQGREVDGIEAQGGFQYTGDDGQVYAISYAAGQGGFQAQGAHIPTAPPTPEAILKALEQNARDEAAGIIDDGQYNPGKYGDASFPQQQYRAQAQASASYRQPYKY

Description

Component of the pupal abdominal endocuticle. May have important role in the pharate pupal cuticle structure.

Keywords

Cuticle   Direct protein sequencing   Signal  

Feature

chain  Cuticle protein 3

Uniprot

C0H6K8   H9JST5   A0A2H1VAQ8   A0A2W1BWP5   A0A2A4J931   A0A212FLY9   + More
A0A194QX24   I4DLW1   B2DBH1   A0A0L7LC25   A0A212FLX8   A0A2W1BSI1   P85197   C0H6L0   A0A194R0Z3   A0A3S2NPI0   A0A194QW22   A0A0L7LC15   A0A194QGP7   A0A212FLW8   A0A2A4JNS7   P85196   A0A2H1W9J0   A0A194QKY2   A0A2H1VWQ9   A0A0N1I4N1   A0A194QFC5   A0A0L7LCL1   A0A2W1BUL2   I4DM91   A0A2W1BSJ2   C0H6K9   A0A2A4K2A2   A0A194R0Y7   A0A212FLY6   A0A2W1BWM4   A0A2A4JAC8   A0A212F6E4   Q8T4J9   A0A2H1VAQ9   A0A0L7L8Q3   A0A3Q8HPX9   C0H6K6   A0A2H1VVH7   H9JSU4   A0A2A4JB33   A0A2H1VAU4   A0A2W1BSL4   A0A2H1VX73   A0A0L7K283   A0A212FLX3   A0A2A4K0W8   A0A0L7LBR9   A0A2A4K0U6   A0A2W1C1Q8  

Pubmed

19280704    19121390    28756777    22118469    26354079    22651552    + More
18712529    26227816    18342903    12609518    10646967   

EMBL

BR000518    FAA00519.1    BABH01035926    ODYU01001547    SOQ37925.1    KZ149913    + More
PZC78044.1    NWSH01002296    PCG68627.1    AGBW02007689    OWR54751.1    KQ461073    KPJ09510.1    AK402279    BAM18901.1    AB264651    BAG30730.1    JTDY01001769    KOB72940.1    OWR54753.1    PZC78042.1    EU106114    ABU88846.1    BABH01035929    BR000520    FAA00521.1    KPJ09511.1    RSAL01000016    RVE52995.1    KPJ09509.1    KOB72939.1    KQ459053    KPJ04110.1    OWR54744.1    NWSH01001021    PCG73070.1    EU106116    ABU88848.1    ODYU01007203    SOQ49775.1    KPJ04106.1    ODYU01004869    SOQ45186.1    KQ459413    KPJ01110.1    KPJ04114.1    KOB72941.1    PZC78051.1    AK402409    BAM19031.1    PZC78052.1    BABH01035927    BR000519    FAA00520.1    NWSH01000264    PCG77893.1    KPJ09506.1    OWR54752.1    PZC78045.1    PCG68628.1    AGBW02010037    OWR49312.1    AY083171    AAL92478.1    SOQ37928.1    JTDY01002201    KOB71887.1    MG601587    AYA49912.1    BR000516    FAA00517.1    ODYU01004383    SOQ44204.1    BABH01035921    PCG68632.1    SOQ37921.1    PZC78049.1    ODYU01004671    SOQ44804.1    JTDY01019301    KOB51793.1    OWR54745.1    PCG77887.1    KOB72938.1    PCG77891.1    PZC78053.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000037510    UP000283053    + More
UP000053268   

PRIDE

C0H6K8    H9JST5    C0H6L0    C0H6K9    C0H6K6   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6K8   H9JST5   A0A2H1VAQ8   A0A2W1BWP5   A0A2A4J931   A0A212FLY9   + More
A0A194QX24   I4DLW1   B2DBH1   A0A0L7LC25   A0A212FLX8   A0A2W1BSI1   P85197   C0H6L0   A0A194R0Z3   A0A3S2NPI0   A0A194QW22   A0A0L7LC15   A0A194QGP7   A0A212FLW8   A0A2A4JNS7   P85196   A0A2H1W9J0   A0A194QKY2   A0A2H1VWQ9   A0A0N1I4N1   A0A194QFC5   A0A0L7LCL1   A0A2W1BUL2   I4DM91   A0A2W1BSJ2   C0H6K9   A0A2A4K2A2   A0A194R0Y7   A0A212FLY6   A0A2W1BWM4   A0A2A4JAC8   A0A212F6E4   Q8T4J9   A0A2H1VAQ9   A0A0L7L8Q3   A0A3Q8HPX9   C0H6K6   A0A2H1VVH7   H9JSU4   A0A2A4JB33   A0A2H1VAU4   A0A2W1BSL4   A0A2H1VX73   A0A0L7K283   A0A212FLX3   A0A2A4K0W8   A0A0L7LBR9   A0A2A4K0U6   A0A2W1C1Q8  

KEGG

100379449    no KO assigned | (RefSeq) CPR17, BmorCPR17; cuticular protein RR-1 motif 17

GO

GO:0042302   GO:0016021   GO:0005549   GO:0007608   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

SignalP

Position:   1 - 16,         Likelihood:  0.985541

 

 

Length:

168

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.88634

Exp number, first 60 AAs:

0.88591

Total prob of N-in:

0.04876

outside

1  -  168

 

 

Pi

238.584298

Theta

141.960172

Tajima's D

2.397249

CLR

0.580579

CSRT

0.932903354832258

Interpretation

Uncertain