Gene

KWMTBOMO11217

Pre Gene Modal

BGIBMGA012603

Annotation

cuticular_protein_RR-1_motif_13_precursor_[Bombyx_mori]

Location

Bomo_Chr19(-):1195203-1196925      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.55

CDS

ATGTACCTGCTCATAACTGTAGCCGTCCTGGCTGTGTCTCATGCAGCTAAACTGGACAAGACCTACCTTCCTCCTCACTCGCAGTCCTCCGGCGGGTCTGGTAGCTTCCTCCAGACTCCATTTGTCGAAGCCCAGAGACAAGCACAGCTCGGATCGGCAGCTCAGAATGGCTTCGCTCGTGCCGGTAATGGGTTCGCCCAACCAGCCTTCGGCGGTCAGTACAGCAACGGATACGACGCGGTAGGTGTGGAGAGCCGCCCTGAACGTCCTCGCGCCGCTCTCGAGAGGAACGCAGCCATCCTCCGTCAGGACAACACCAACAACGGAGACTCCTACTCCTACGCGTACGAGACTGAGAACGGCATCTACGCTGAGGAGAACGGAGTCGCCGCCAACGGAGTGGAGGCTCAGGGAGGGTACTCTTACACCGGAGACGACGGACAAGTCTACACTATCCGATACACCGCGGACCAGAACGGCTTCGTGGCTCAAGGAGACCACATCCCCACCGCCCCCCCGGTCCCCGAGGAGATCCTGAGGGCGCTCGAGCAGAACGCTCGGGACGAAGCCGCCGGCATCTACGATGATGGATCCTACAGCGAAGAGAAGTATGGGGGTGGCGAGGCGCGTCTCAACAAGCAGTACGCAGACAGCGTGGTGACCGACTCCGCGGCGTATCGTGACGTCAGCGGCCTGAGGACGCAGGCTTCCTTCCGCAACGGCCCTCAGACGGCATACCTCCCTCCCGCCCAGAGGAGGCAAGATGCCGGCTACCACTACTAA

Protein

MYLLITVAVLAVSHAAKLDKTYLPPHSQSSGGSGSFLQTPFVEAQRQAQLGSAAQNGFARAGNGFAQPAFGGQYSNGYDAVGVESRPERPRAALERNAAILRQDNTNNGDSYSYAYETENGIYAEENGVAANGVEAQGGYSYTGDDGQVYTIRYTADQNGFVAQGDHIPTAPPVPEEILRALEQNARDEAAGIYDDGSYSEEKYGGGEARLNKQYADSVVTDSAAYRDVSGLRTQASFRNGPQTAYLPPAQRRQDAGYHY

Uniprot

C0H6K4   A0A3S2NPI0   A0A2H1VVG3   A0A2H1VWH7   A0A2H1VTR4   A0A194QFC5   + More
A0A2A4K1W4   A0A0N1I4N1   A0A2H1W9J0   A0A0L7KNI3   A0A2H1WD94   A0A2H1VWQ9   A0A194R0Y7   A0A2W1BSJ2   A0A2A4K2A2   A0A212FLW8   A0A2W1BUL2   A0A2A4K0U4   A0A2W1BYY9   C0H6K2   A0A212F6E4   A0A212F6G4   A0A0L7LAY7   A0A212FLY8   A0A194QW22   D6WB15   H9JSU4   U4UZU9   J3JX57   A0A1Y1LS31   U4UUK7   C0H6K6   N6U5T8   N6U358  

Pubmed

19121390    19280704    26354079    26227816    28756777    22118469    + More
18362917    19820115    23537049    22516182    28004739   

EMBL

BABH01035915    BR000514    FAA00515.1    RSAL01000016    RVE52995.1    ODYU01004671    + More
SOQ44803.1    ODYU01004870    SOQ45187.1    ODYU01004383    SOQ44203.1    KQ459053    KPJ04114.1    NWSH01000264    PCG77894.1    KQ459413    KPJ01110.1    ODYU01007203    SOQ49775.1    JTDY01008297    KOB64641.1    ODYU01007880    SOQ51039.1    ODYU01004869    SOQ45186.1    KQ461073    KPJ09506.1    KZ149913    PZC78052.1    PCG77893.1    AGBW02007689    OWR54744.1    PZC78051.1    PCG77895.1    PZC78050.1    BABH01035912    BR000512    FAA00513.1    AGBW02010037    OWR49312.1    OWR49314.1    JTDY01001990    KOB72386.1    OWR54746.1    KPJ09509.1    KQ971311    EEZ98926.1    BABH01035921    KI208855    ERL95946.1    BT127825    AEE62787.1    GEZM01050261    JAV75648.1    KI210327    ERL96243.1    BR000516    FAA00517.1    APGK01041297    APGK01041298    APGK01041299    APGK01041300    APGK01041301    APGK01041302    APGK01041303    APGK01041304    APGK01041305    KB740993    ENN76006.1    ENN76005.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000218220    UP000037510    UP000053240    + More
UP000007151    UP000007266    UP000030742    UP000019118   

PRIDE

C0H6K4    C0H6K6   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR031311   CHIT_BIND_RR_consensus        + More
IPR000618   Insect_cuticle       

ProteinModelPortal

C0H6K4   A0A3S2NPI0   A0A2H1VVG3   A0A2H1VWH7   A0A2H1VTR4   A0A194QFC5   + More
A0A2A4K1W4   A0A0N1I4N1   A0A2H1W9J0   A0A0L7KNI3   A0A2H1WD94   A0A2H1VWQ9   A0A194R0Y7   A0A2W1BSJ2   A0A2A4K2A2   A0A212FLW8   A0A2W1BUL2   A0A2A4K0U4   A0A2W1BYY9   C0H6K2   A0A212F6E4   A0A212F6G4   A0A0L7LAY7   A0A212FLY8   A0A194QW22   D6WB15   H9JSU4   U4UZU9   J3JX57   A0A1Y1LS31   U4UUK7   C0H6K6   N6U5T8   N6U358  

KEGG

101746923    no KO assigned | (RefSeq) pupal cuticle protein 27-like

GO

GO:0042302   GO:0016021   GO:0005549   GO:0007608   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

SignalP

Position:   1 - 15,         Likelihood:  0.987075

 

 

Length:

260

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00652

Exp number, first 60 AAs:

0.00652

Total prob of N-in:

0.01491

outside

1  -  260

 

 

Pi

199.200404

Theta

160.724293

Tajima's D

1.069986

CLR

0

CSRT

0.68061596920154

Interpretation

Uncertain