SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11214  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012601
Annotation
cuticular_protein_RR-1_motif_11_precursor_[Bombyx_mori]
Location
Bomo_Chr19(+):1152106-1160390      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.006
 

Sequence

CDS
ATGATTTTGCTGGTACTAACCGCTCTCACAGCGGTATGTGGCGCCGCGAAGTTAGACAGGACCTACCTACCACCCGCTTCTGCTAAAACAGCTGGTGGGAGTCCAGGGTCCTTACAAACTCCTCTCACGGGAAGCTTTAACCAAGGAATAGGAGAACTACCAGCCGGCGGTTATACTAACGATGCCCAGGGCGTCGTGGTAGACGCAGCATTAACTGGCACTAGATCTACAGGTGAATCGGAACAGTCCGGTTTGGGTGGCCCAAGACCTTCCTACGGATCGACGGCATCTAAGGTTGGTGACGCAGCCTTCAGAGGCTCTCAAAACAATTTCGGGGCTCCACTAAGCGGCCAAGTAAATGGGGCATTCGAAGCGAAACCCGAAAGACCTCAAGCGACTCAAGACAGGAATTCGAATATAATAACTTACGAAAACAATGTCGACATAAATAACTATAATTATGGCTTCGAAACTGATAATGGAATAGCTGTCGGAGAAAATGGCGTGGCCCATGATGGAGTGCATGCCCAGGGCGGGTACTCTTACAAGGGCGACGATGGCCAAGTCTATAGCGTCACCTACACTGCTGATAAGAACGGGTACAAGCCGCAAGGAAACCATTTGCCGACCGCTCCTCCGATTCCTGACGAGATTCTAAAGTCCATCGAGCAGAACAAAAAGGATGAAGCTGCTGGCCTAGTTGACGACGGCTCTTACGATGCTCAGAAATACAATGCGGAAGGTGATTACACTGAGAGTGACAGTAATAAATACAATGGCGAACAACAGAGTCAATTTGACAAGCGACCTGGATCAGATACGACTTCCAATGGAGCTGTCATCAATCAGAACGGCTTGAACTCGGGCCCCGCTAATGGCGCTCAAACGCAAAATGACGTACCAACCATCATCCCCGGATTGAGCAGCCAAACATTTACTGGCCAACCATTGCCAGGTTTTGGCCAATTGGCCCAAATAGGATCGCAGTTCATTTCGAAACCTGGAGGACAAAATGGTTTTGATAGTTTGATCAGCACTGGTTCTGCTATTGGATCTGCTGTACAACATGGATTGCAGTCACTGAAACCACAGTTTGGTCAATCTTCGATAATTCCCAGTACGTTTCCTAGTCTCCTGCCTAATCAAGGACCGTCATTGCTTGGTGGCTCAACCTCCCAGACAAACATTGGCAGCGCTATTATCGGTTCTTTCACCCAATTTGATGAAGCACAAGGAACACCATCTACAGCTAACAATCAGCAGTCATCATCTAATGATGAACAACCTATTGCTCAAAATTCACTAACTTATACTGGTACTTCAAGCAAACCGGGTATCCAACAATTTGGGTCAAACTATAAGCCAACTGGAACTACCACCAATAACTTTGGCCAAGCTGGACAAAGTGGTTTTATAAATAATGAGTACTTGCCACCTTTTAGTGACGCCGGACAAACTCAACTTAATTATAATGCACAGCCTCAAAAGCCAGGAGCTTTCACTTTTAGTACAAATAAACCATTTGGATCTATCGGAGGGTTTCCAACCCCATCTGGAAGTCCTCCCGGACAGTTCACTTCATCTACTCTAAACTCACAATCTTCTTACGGAAATCAGCAACAAGTCTCTGGTTCCATAGAATCAGTGTCTCGACCGGGACTTTTGCAATCAACCTCTCCCCAAGGTTCAACTGAAACTGCTTCTAATAATTTTGGGTCATTCAAGCCTCAAAACTCTGTTCCGCAAGCTGGTCTAACAACATCTATGAAACAAAACGAAGAAAAGCACGAAGGTGACGCCGGCGCACAAGGTCAGATTTCCAATAATCCAAGCCAACCGTCTACAAGTACAACAACAAGCCAAATCGGTACTTCGCAGTTCCCATCCCAAACAGGACAAAATTCTCATGTAGCGGACTTTCAAAGCTTCAAACCTACTTTCGGTTCGTACAATACACAGAAGCAGCCTTCCGCCTTTCCAGTTCAACAACCCCAAGGCCAAGGTCAAATAAACGAGCTTCTGACTAGCAGCAATCGGCCGTCGTCCTTCCAAACCGGATTCACTCAGAATGATGCTTTCGGAACACAATCGTCGCCAGCTTCCGTACAACAATTTCAAGGTCAAAGACCATTCTCTGGAAATCAACAACCGAGTTATACTCAGAACGCATTTAGCACGCAACCACAGATCCCGACGATTCCTAGTCAGCAACTAAGCCAACCACTATCTGGAGGTCAACCGCCACAGTCTTTCCAAAATGGGTTTAATCAGAATAATGGATTTAACACAAAACCATCAAGTACTCCAGGAAAGCAGCCTCAAGGTCAAATTAGTCAACCCGGTTTAATAAACAAACCTCAGCCTCTTCAAACGGGATTGTCGCAAAATGGAGCATTTGCTTCTCAAAATAAACCATTATCATCTTCAAATCTACAGCCGCAAGGTCAGAATCAATTTGGTCAAGCTTCAATAGGAAATAAACCACAGACATTCCAAAATGGCTTTACACAGACTGGAGCTTTTGGAATTAACAAGCCGACGAACCCAACCCTAGTTCAAAATCAACAAAACCAATTCAGCAGTGGCCAGAAACAGCCATCACCATTTCAAACTGGATTCTCTCAGAATAATAATCTATTTGGCCAGCCCACTGCTTCAAGCGGATCCATTCAAAATGCTTTTGGTAGTCAACGCCCTCAAACGCAGAGTACTACATCGCCTTTTAATAATCAACCCATAGTTGTCCAGCAACCACAAGGAGCTGATCATTCTTATTATTATAATCAACCAACAAAACCATTTAGTACTCCATCTTCGGAGATCCAGCAAGGAGGTAAGGTTCCGTTTTCATCTAAGCCATCAAATATACCGACTGTGGATAAAATCAAATATCCTAGTACAGAGGATCAGGAAGAATACGCTAACTCTACCTCTAAGCCTGAACAGCAACCTGGAGCATCACAACCTGTATTTAACGGAGTGACTCAGGCTTCAGCATCCCCATTTCCTACTAAGCCAACAATACCATCTGCTCAATTCGGAAACAGATTCGGTGTTAAGCCTCAACAAGTCCTGACTCCTCAGAAGCCTCAAACATTTTTACAATCGGGGCAGCAGTTTTCAAAGCCAGAATCAGTCCAAAGTACAATACAAAACGTGAATAATCAGTATAAGCCTCAGAAGGCAGTCAGTCAAGACGAACCCGCGAAAACTGATTCAGAAGATAACTTTAATCCATCCGAATCTAAACCCACTCAACAATACGACGGTGAACTATATCAGTATAACAAACCAGAGCCAGTTTTAGCTCCTGGAACTGAGCAAGAAGATTCTTCAGATGATAAATCTTCCAACGAACAACCTCAAACCAAGCCACAATTTGATCAAGACAGCCAGTCCCCTTCAAAAACCGAGACTGAAATACAAACATCTTCTTTTGGAGCAACCAAACCAACTAATCAATTTTCTTTCGGAATTACACCGCAACAGCCAACTTCTCAGTCTCAATTTGGTTCCCAACCATTCAAGCCTTTTGGTGCTGCTTCTCTACCTGGATCCCTACCGGCTAAAGGTCAATTTGGTCAAAACTCACAATCATCCTTCACAAATATTCCAACTTCTCAATTAGCTGGTTTTCAGTTCGGAACTCCACCATTAAAGCCTTTTGGTCAGCAACCAACTGGTGCATTTGGATCTAATCTCAAACCCCAATTTGGTCAGACACAACAGACCAAACCACAATTTGACCAATCTCTGAATGTAAGTCCACAAACTAGTCAATCTTCACAACCAGGTTTCGGAAGCCCGGTAACTGGAACCCAAGGATTTCCAACACAATTCGGGAATCAAGGCTACAAGCCTTTCGGTGTTGCTCAGACTCCAAACAAGCCTCAATTTGGTTTCCCATCAAAAGCGCAAGCTGGACAAATTCAATCACCAAACTACAACCAACAGTCCATTTCGAAATTCGGTTCCCAAACTTATAAGCCATTTGGAAGTCAAATACCAGCAAATATTCCCCAAATCGGTCAATCGCAACCAATCTTTGGATCAAATCAAGCACAGCCTGCTCGTGGGCAGTACAATGATTACCAGACACAATTTCCTGCACCAACAAAACCTGAGTTTGGTCAATCCTCAGCAAATGCATACGCATCTAGCAGCCCTGCAGTCTCCAATTCACAGGCTTTCAGGCAGCCCAATAAACCTTTCGGTTTCCAGCCAGCATCGAGTCCCTCCTCATACAGTCAAAGACCGTCACAGGAGTCAGCGAGTTCAGCGACTGCTCAAGGTCCATCAGCCACCGCATCAGCTCAAGCATCAACCGGACAGGAATCCGAAGTTCAGGCCAAGCCCGCTTTTGGTAAACCATGCTGTAAGATAGCTCAGTTTGGTCAAACCTCAAATCAGGATGCTCAAAACCAAGAAACCAAAGGTGAAGAGTTCAGTGGTCCCAAACAACCTCAGAGGTTTGACGAGAAAACCGGCTATCATTACTAG
Protein
MILLVLTALTAVCGAAKLDRTYLPPASAKTAGGSPGSLQTPLTGSFNQGIGELPAGGYTNDAQGVVVDAALTGTRSTGESEQSGLGGPRPSYGSTASKVGDAAFRGSQNNFGAPLSGQVNGAFEAKPERPQATQDRNSNIITYENNVDINNYNYGFETDNGIAVGENGVAHDGVHAQGGYSYKGDDGQVYSVTYTADKNGYKPQGNHLPTAPPIPDEILKSIEQNKKDEAAGLVDDGSYDAQKYNAEGDYTESDSNKYNGEQQSQFDKRPGSDTTSNGAVINQNGLNSGPANGAQTQNDVPTIIPGLSSQTFTGQPLPGFGQLAQIGSQFISKPGGQNGFDSLISTGSAIGSAVQHGLQSLKPQFGQSSIIPSTFPSLLPNQGPSLLGGSTSQTNIGSAIIGSFTQFDEAQGTPSTANNQQSSSNDEQPIAQNSLTYTGTSSKPGIQQFGSNYKPTGTTTNNFGQAGQSGFINNEYLPPFSDAGQTQLNYNAQPQKPGAFTFSTNKPFGSIGGFPTPSGSPPGQFTSSTLNSQSSYGNQQQVSGSIESVSRPGLLQSTSPQGSTETASNNFGSFKPQNSVPQAGLTTSMKQNEEKHEGDAGAQGQISNNPSQPSTSTTTSQIGTSQFPSQTGQNSHVADFQSFKPTFGSYNTQKQPSAFPVQQPQGQGQINELLTSSNRPSSFQTGFTQNDAFGTQSSPASVQQFQGQRPFSGNQQPSYTQNAFSTQPQIPTIPSQQLSQPLSGGQPPQSFQNGFNQNNGFNTKPSSTPGKQPQGQISQPGLINKPQPLQTGLSQNGAFASQNKPLSSSNLQPQGQNQFGQASIGNKPQTFQNGFTQTGAFGINKPTNPTLVQNQQNQFSSGQKQPSPFQTGFSQNNNLFGQPTASSGSIQNAFGSQRPQTQSTTSPFNNQPIVVQQPQGADHSYYYNQPTKPFSTPSSEIQQGGKVPFSSKPSNIPTVDKIKYPSTEDQEEYANSTSKPEQQPGASQPVFNGVTQASASPFPTKPTIPSAQFGNRFGVKPQQVLTPQKPQTFLQSGQQFSKPESVQSTIQNVNNQYKPQKAVSQDEPAKTDSEDNFNPSESKPTQQYDGELYQYNKPEPVLAPGTEQEDSSDDKSSNEQPQTKPQFDQDSQSPSKTETEIQTSSFGATKPTNQFSFGITPQQPTSQSQFGSQPFKPFGAASLPGSLPAKGQFGQNSQSSFTNIPTSQLAGFQFGTPPLKPFGQQPTGAFGSNLKPQFGQTQQTKPQFDQSLNVSPQTSQSSQPGFGSPVTGTQGFPTQFGNQGYKPFGVAQTPNKPQFGFPSKAQAGQIQSPNYNQQSISKFGSQTYKPFGSQIPANIPQIGQSQPIFGSNQAQPARGQYNDYQTQFPAPTKPEFGQSSANAYASSSPAVSNSQAFRQPNKPFGFQPASSPSSYSQRPSQESASSATAQGPSATASAQASTGQESEVQAKPAFGKPCCKIAQFGQTSNQDAQNQETKGEEFSGPKQPQRFDEKTGYHY

Summary

Uniprot
NA  
ProteinModelPortal
NA  

Ontologies

KEGG
100379455    no KO assigned | (RefSeq) CPR11, BmorCPR11; cuticular protein RR-1 motif 11
GO
GO:0042302   GO:0005549   GO:0007608   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.969456
 
 
Length:
1499
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02893
Exp number, first 60 AAs:
0.02893
Total prob of N-in:
0.00145
outside
1  -  1499
 
 

Population Genetic Test Statistics

Pi
238.721882
Theta
199.879222
Tajima's D
0.604501
CLR
0.603487
CSRT
0.545922703864807
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 STGDEEDVIEDVTAK 95.65 3e-07
29197581 STGESEQSGIGGPR 95.65 3e-07
28467696 GDAITVAEIAGVIGAK 100.00 0.002
29197581 TGSSEQPSGQYNSAASPNSQSGPAK 100.00 0.002
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