SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11206  Validated by peptides from experiments
Annotation
PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]-like?_partial_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.975
 

Sequence

CDS
ATGAATGCAACATCAACATTGAATGAAATTCATAGACTTCAAACCGGCTTTCAAATACTGGCAGCTCTGCAGCTAACTGGGTATCTTTGGCCACAAGAAGCGGTTATTCAAGATGGTGCCAAGTATGATTTCATTGTTGTCGGCGCTGGATCTGGTGGATGCGTGGTCGCTAATAGACTGTCGGAGATTAAAAACATCAATGTATTGCTGATTGAAGCTGGAGGAGATCCCCCAATAGAATCTGTTATTCCAAGCTTAAACCTATTTATGAAGGTTTCGAAAGTAGACTGGAATTACACATCCGTCCCGGATGTAACAATGAAATACATGAAAAATCAAGTCGTCCAGGTTACAAGAGGGAAAATGCTCGGTGGGACTAGTTCTATCAATTTCATGGCCTACACGAGAGGGAATTCCCATGATTATGATACATGGGCTAAAATTGTTAATGATACAACTTGGAAGTGGGAGAACGTGCTACCGTACTTCATCAAGAGTGAAAGACTTGATGAATCCGATCTAAATTGGGTTGACAAAGAACTTCATGGTACTGAAGGTTATTTGGGCGTCAGCACACAACACAATGATGTGACATCTGAATACTTGAAAGCTTTTTCTGAAGTCGGTCATGATATCGAATACGAGATAAATGGAAACAAACCAATTGGTTTTAGTGAGCCATTATTTACAATTGCAAATGGAACACGACAAAGTGCTGCTTTAGCATTTCTCTCAAAATTTCAGGATCGTACTAATCTACATGTTTTGAAGAATGCTTTAGTTACAAAAATTTTGTTCGATGACAACAAATGTGCAACTGGTGTTGAATTAATATTAAATGATAGATTGATGACAATAAGGGCAACTAAAGAAGTAATCGTATCTGCAGGAGCTATCAACTCTCCTCAATTGTTGATGCTTTCAGGAGTTGGCCCTCGGCAGCATTTAAAACATAAAAACATCAAGGTTATATCTGATTTACCAGTAGGACAAAAAATGCAAGATCATATTTACGTTCTAGTTGTACATAAAATGGGTAAAGCGATTTTAAATAAGAAACCAGTTGATCCTTCGAAATATCCATTACCTTTAATCATAGGATACGCAGCTTTGAACAAGACTCAAAAGTATCCTGACTACGAGATAACGACGGCTATTTTAAATGACAAGAATGATTTTATGCCTTCTTGTGTGTTTTTCTTGAGCTTAAAAGACGAAATCTGCCAAGATTATTATGACCATAGTGGTGACCGGCAATTGATGTATACATTGGTGAGCTACTTATATCCGAAATTTTGCGGCCAAATTCTGTTGAACACAACAAATCCTCGCGATCAACCTCTCATTTACCCTAACTATCTCACAGAAGAAAAAGATATAGAAAACCTTGAAAAATATGTTAAAGATTACCTCAAAGTTACGAACTCTAGCTTCTTCAAAAGTGTTAATTCAGAGCTTATAATTCCAAGGGCTTGTAACTGCGTTCCTGATCAAAGTTTTTGGAAATGTTACGTGAAATGCCTGGTTATCCCTGGCTATCATTTTTCCGGTACTTGTGCTATGGGTGAAGTGGTTGATTCTAGGTTAAGAGTCTACGGAGTTAAAAAACTGAGAGTCGTGGATGCCAGTGTGATGCCCCGAATACCTGGAGCCCATACCAACGCACCAACTATAATGATCGGCGAAAAAGCAGCCGATATGATAAAAGAGGACCATGAGCTGCTGTTGCTGTAA
Protein
MNATSTLNEIHRLQTGFQILAALQLTGYLWPQEAVIQDGAKYDFIVVGAGSGGCVVANRLSEIKNINVLLIEAGGDPPIESVIPSLNLFMKVSKVDWNYTSVPDVTMKYMKNQVVQVTRGKMLGGTSSINFMAYTRGNSHDYDTWAKIVNDTTWKWENVLPYFIKSERLDESDLNWVDKELHGTEGYLGVSTQHNDVTSEYLKAFSEVGHDIEYEINGNKPIGFSEPLFTIANGTRQSAALAFLSKFQDRTNLHVLKNALVTKILFDDNKCATGVELILNDRLMTIRATKEVIVSAGAINSPQLLMLSGVGPRQHLKHKNIKVISDLPVGQKMQDHIYVLVVHKMGKAILNKKPVDPSKYPLPLIIGYAALNKTQKYPDYEITTAILNDKNDFMPSCVFFLSLKDEICQDYYDHSGDRQLMYTLVSYLYPKFCGQILLNTTNPRDQPLIYPNYLTEEKDIENLEKYVKDYLKVTNSSFFKSVNSELIIPRACNCVPDQSFWKCYVKCLVIPGYHFSGTCAMGEVVDSRLRVYGVKKLRVVDASVMPRIPGAHTNAPTIMIGEKAADMIKEDHELLLL

Summary

Cofactor
FAD
Similarity
Belongs to the GMC oxidoreductase family.
EMBL
KZ150085    PZC73783.1    JTDY01000758    KOB75991.1    RSAL01000341    RVE42399.1    + More
RVE42398.1    ODYU01001603    SOQ38054.1    NWSH01000445    PCG76355.1    KZ149986    PZC75677.1    AGBW02010007    OWR49347.1    ODYU01001607    SOQ38064.1    SOQ38065.1    ODYU01003587    SOQ42538.1    NWSH01000095    PCG79621.1    ODYU01008704    SOQ52509.1    JTDY01000418    KOB77282.1    FP102341    CBH09301.1    ODYU01012146    SOQ58297.1    KQ460044    KPJ18288.1    NWSH01000427    PCG76483.1    ODYU01006017    SOQ47491.1    PZC73780.1    KZ150303    PZC71524.1    BABH01039855    BABH01039856    JTDY01000066    KOB79079.1    PCG79619.1    NWSH01000760    PCG74382.1    NWSH01000039    PCG80370.1    KZ150274    PZC71662.1    ODYU01000155    SOQ34448.1    NWSH01000559    PCG75661.1    ODYU01001935    SOQ38829.1    BABH01039860    BABH01039861    BABH01005285    KPJ18290.1    KZ150015    PZC74989.1    KQ459232    KPJ02519.1    KPJ18289.1    NWSH01004349    PCG65195.1    OWR49345.1    PZC71523.1    BABH01005224    BABH01005225    BABH01005226    KPJ02521.1    KPJ18287.1    SOQ52508.1    PCG74381.1    ODYU01005196    SOQ45815.1    ODYU01010073    SOQ54917.1    AGBW02007651    OWR55045.1    NWSH01004322    PCG65227.1    KPJ02522.1    PZC73781.1    SOQ47492.1    JTDY01000335    KOB77647.1    JTDY01008771    KOB64409.1    PCG79620.1    JTDY01003559    KOB69344.1    KQ459603    KPI92960.1    KZ149963    PZC76281.1    ODYU01005459    SOQ46343.1    JTDY01004415    KOB68187.1    NWSH01001625    PCG70657.1    BABH01024320    GQ285072    ACT66690.2    PZC73782.1    BABH01024325    KQ461194    KPJ06879.1    KZ150336    PZC71326.1    PZC76280.1    ODYU01010216    SOQ55185.1    JTDY01002689    KOB70914.1    NWSH01001885    PCG69794.1    ODYU01006844    SOQ49058.1    KF717658    AIO02860.1    BABH01005279    KF717656    KF717657    KF717660    KF717667    AIO02858.1    AIO02859.1    AIO02862.1    AIO02869.1    KF717661    AIO02863.1    KF717664    AIO02866.1    KF717655    AIO02857.1    KF717651    AIO02853.1    KF717652    AIO02854.1    JF433972    KF717653    KF717659    KF717662    KF717663    KF717665    KF717666    KF717668    AEM17059.1    AIO02855.1    AIO02861.1    AIO02864.1    AIO02865.1    AIO02867.1    AIO02868.1    AIO02870.1    JTDY01009199    KOB63957.1    FJ493468    ACL36977.1    AGBW02014643    OWR41285.1    SOQ46342.1    KF717654    AIO02856.1    NWSH01004424    PCG65132.1    KQ460627    KPJ13480.1    KPJ18306.1    KQ459585    KPI98211.1    KPJ02520.1    AAZX01001588    NNAY01002979    OXU20190.1    KQ434869    KZC09325.1    GFDL01002031    JAV33014.1    GECU01033045    JAS74661.1    CCAG010013550    BABH01003799    JTDY01000479    KOB76996.1   
Pfam
PF00732   GMC_oxred_N        + More
PF05199   GMC_oxred_C
Interpro
IPR000172   GMC_OxRdtase_N        + More
IPR012132   GMC_OxRdtase       
IPR007867   GMC_OxRtase_C       
IPR036188   FAD/NAD-bd_sf       
IPR027424   Glucose_Oxidase_domain_2       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
SUPFAM
SSF51905   SSF51905        + More
SSF57756   SSF57756       
Gene 3D
PDB
4YNU     E-value=1.90581e-47,     Score=479

Ontologies

Topology

Length:
577
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.346050000000001
Exp number, first 60 AAs:
0.3063
Total prob of N-in:
0.01657
outside
1  -  577
 
 

Population Genetic Test Statistics

Pi
206.841176
Theta
198.701065
Tajima's D
1.006528
CLR
0
CSRT
0.663116844157792
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
25860555 GIIEDVFNISPAGR 95.45 2e-10
27102218 QSAAIAFISK 95.45 2e-10
25860555 NDQVVVSR 100.00 3e-05
27102218 AADMIKEDHEIIII 100.00 3e-05
26822097 KFSTMPYIFCNINNVCDFAQR 100.00 3e-04
25860555 NIATSHEVAK 100.00 3e-04
27102218 IPGAHTNAPTIMIGEK 100.00 3e-04
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号