SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11204
Pre Gene Modal
BGIBMGA012631
Annotation
PREDICTED:_pregnancy_zone_protein-like_[Papilio_machaon]
Location in the cell
Mitochondrial   Reliability : 1.936
 

Sequence

CDS
ATGTTAAAGTTGTGTTTTTTTTATTCGTTTATCATTGCGTCAGTTCGGACGGAATTGTATGAGAACAATACAAATAAGAATTTAAGTACATACCCATGCACGGACAAAAACCATTTATTCCTGGCGCCAGGAGTCTTGACGGCTGGTGGTACGAACAGAGCCTGCATCTCCAGGTTCTTCCCTGAAGGCCCAGCGACGTTGCTCCTAACTCTTAGACGTGAAAACGACGAGACCACTACAGCATCAAGGGAATTACCGCCAGGTGACGGAGGCTGTTTAGACTTCTCTGTACCTTTATTACCGAACACCAAAGCCGAACTCAACGTTAAAATAAAGTACCCCGTAGTGCAATGCAGCTGGGAACGTCACGTGACACTGAGGATATCCAGCGGAAGGGTGTTGCTGATACACGCCGAGCGAGCCAGATACAGGCCCGGGGACATCGTGAAGTTCAGGATTTTCGGATTCAAAACTGATCTGACTCCTAACACTGATAACATTGACGAAGCGTGGATCGAAGGACCTCGTGGTGTCTGGGAAGGTACCCGCGTGGCGCAGTGGACGCGGGTTCGAACTAGGCTAGGACTTACTCAACTGCAGCATTCTCTGGATGAACTGGCGCCGACCGGGACGTACACCATCAGAGCTAGACTCGCTGATGGGTCACAGGGTTCAACTACATTTTGGGTCGGCCATTACGACCTGCCCCCATTCCAGCTGACGGTTCGCCACGCACCTCGAGTCTTGCGTACCAGCGAGCGCCTTGTCTGGGTCGTTTGCGTGAGGTACCCGTGGTCTGAAGCTGTGGAAGGCATGCTGGTGATCCGCTTGCGAGGAGCCGGTAACGCTGAGAGCAGTCCCGGGATCAGAACGGCGGTGAGGCTGCGAGCCCCGCGCGCGTGCCACCGCCACGCCGCCGCCGCCAAGAGGGTCGGGCTCGGCGGGGAACATTCCCCCGACGTGCTTGTAGCTGACTTCTCCTTCCAAGAAGAAGGTACTAGAGTTTGGCAGAACACCACCGTGGTCTCTCAAGTCGTGGACAAGCCAATATCTCTGGAGTTCTTGACGAAGCACCGCGCTGTCATATCGCCCGGTCTCCCTTACAAGTTGAAGGTGAGGAGTTGTATTAAATGA
Protein
MLKLCFFYSFIIASVRTELYENNTNKNLSTYPCTDKNHLFLAPGVLTAGGTNRACISRFFPEGPATLLLTLRRENDETTTASRELPPGDGGCLDFSVPLLPNTKAELNVKIKYPVVQCSWERHVTLRISSGRVLLIHAERARYRPGDIVKFRIFGFKTDLTPNTDNIDEAWIEGPRGVWEGTRVAQWTRVRTRLGLTQLQHSLDELAPTGTYTIRARLADGSQGSTTFWVGHYDLPPFQLTVRHAPRVLRTSERLVWVVCVRYPWSEAVEGMLVIRLRGAGNAESSPGIRTAVRLRAPRACHRHAAAAKRVGLGGEHSPDVLVADFSFQEEGTRVWQNTTVVSQVVDKPISLEFLTKHRAVISPGLPYKLKVRSCIK

Summary

Pfam
PF00207   A2M        + More
PF07678   TED_complement
PF07703   A2M_BRD
PF07677   A2M_recep
PF17789   MG4
PF01835   MG2
PF17791   MG3
PF17790   MG1
Interpro
IPR011626   Alpha-macroglobulin_TED        + More
IPR008930   Terpenoid_cyclase/PrenylTrfase       
IPR019742   MacrogloblnA2_CS       
IPR013783   Ig-like_fold       
IPR011625   A2M_N_BRD       
IPR001599   Macroglobln_a2       
IPR009048   A-macroglobulin_rcpt-bd       
IPR036595   A-macroglobulin_rcpt-bd_sf       
IPR040839   MG4       
IPR002890   MG2       
IPR041555   MG3       
IPR014756   Ig_E-set       
IPR041813   A2M_TED       
IPR041425   C3/4/5_MG1       
IPR007990   PIP       
SUPFAM
SSF48239   SSF48239        + More
SSF49410   SSF49410       
SSF81296   SSF81296       
Gene 3D
PDB
4ACQ     E-value=6.01351e-11,     Score=162

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.748157
 
 
Length:
377
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00589999999999999
Exp number, first 60 AAs:
0.00559
Total prob of N-in:
0.00243
outside
1  -  377
 
 

Population Genetic Test Statistics

Pi
219.466435
Theta
159.195311
Tajima's D
1.357716
CLR
0.497909
CSRT
0.753362331883406
Interpretation
Uncertain
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