Gene

KWMTBOMO11198  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012662

Annotation

PREDICTED:_focadhesin_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(+):341738-364851      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.764

CDS

ATGGATATTGAGAACCGAGGACCGGGTCTAGAACTCCTTAGAGCAGTCTTCCTCTGGTTGACGTGTAACCCTCAACGAGACGGGGGCTCGAGGCCGTGGCAGCTGTTGCTGAGTCTCCCCCAGGGTCAAGCTAAGTCGTTGCTGCTCCTAGCTTGCCTCAGTTGCCAACAGATATGCAACTCGTCGTTAATAGAGAGAGCATTCAGTGCTTACTCGGCTGTCACCGATGCCGCCATTTACCAGCAGGATAAAGAGACGGTTAGGGCCTTACTGCCCATGCTGGCTAGAATCACCAATGAGCTGATCAAGCATGGTCGTGACCCGCGTCCCTGCTACATCCTGATGGAGCGTTGCTTCAACCTGGACGCTGCGGAACTCAGGACCGTCGCCGGCCTGGTTCTGATGATCTTAGCTGACAACTTGCCCCACACGTCGGCTCTGTACCTCCATGAGCTTTTTAACTTGTGTTTAAATATTATAAATAAATACGCGTACACACAGATCTCGATCAACTACCTGATCGCTTTAACGTTACAGTGGCTTAATATGCCATCTTATCTCACCGCTTCTGCCTTGAAAAGTGCATCGAGAATCCTCGATATTTACCAAGAGGACGCCGGAGAGGACACCAGGATGTACATGACGAATTTAAATACGAATAAAACATTTCAAACATTACTGCACACGGACAAACATCTTTCAATAGTCTACAATTTGAATCGAAACTATGAACGTCTGCGCGACAATCCGGACAAATTAAAATGTTGGGTGTCTGATATTAGTTCTCTAGATAACGCGGTCAAATACGACATGTTGCCGCTATTGCTCGGTGTTGCCATGTCGCAAAACATCGAGGGGGATCAGGAGGAGATCGTGTTGCAATCATTAAATATTTTAATTGATCTGGTTGATTATAACAAGGATATGTCTGTACAACTTTTACCGATCTTGCTCTATAAAATATCGCACGATATATCGCCGTCTATCAAAATGGAGTGTCTGAAGGCTTTACCGCTAATGGCTAAGAGCAAGGAAAATGTGCCAACAATAGTGTCGATATTGAACAAGCTGAAGGTCAATAAAGGTGTGCCGATTTCGTTCCTGATCAGTCTGTATACGAGTCTAAGTGAAACGCAGGTCCGCTGCTTTCCATACCTTCAGGAGTTGTTGGTTGACCCCGGCGCGGGGAGGCCAGACGATCTGAAGTGGGAAGTCGACGTAGCTAGAGCTCTATCGGTCAAACGCATCTGCGAGATAAGGGGCTCGTCTCACGGCGTGGAACTGGTGTCGGTGATCTCGACGCTGTTGAACCGCTGCGGCGACAAGTCCGGGTCGGCGGCGACCTCGGCCGCGCTGCAGAGCATCGCCCGGCTGTGGCGCAGCGCGTCCATTGCGCCGCCGAGCACGTGGCGCGCATTGGAACCCAAACTCGGACGCGACACACGACCTCTGGTGCAAATCAGCGTTTGTAACCTGCTTGCCGAAGTGCCAGCCCTGAGGGTGTCGACTCCTGACTACGACTGGCTGATCAGTGCCTCCTGCCGCCGGCTCTGGGCTTACGTGGCCGATTCGAATCATCCTGAAGTGGTGGAGGCAGCATGCGATGCCTTGGGTGGATATCTGTTGGATGATTACAAGCTTAAGGACATACCAGAGATCTACAGACGCACAGTCAAACTCCCTGCCTCGTACTGCAAGACTCCAGCTGACGCCGCCAGGAATCCTGAAGACGTTCTCGAGTATATTCCGTGCGAGGTGTGGCCGGAAGTGTTCAAGTGCAGTAACCAGGCGGCCCTGGGCGGAGTCGCGCGGCTGACGACCAGGCTGATCGAGCGCGAGATCAAGGGGTACAGGAGCGGCGTGTACCATTTGGAAGCCAAAACTGAGCCCATGGGCTACAACCACCTCCAGCCGTTCAGCGTCATCAGGGGCCTGATGGAATGTTTCAGGAAGCAGGCAACCTCACCCTCGTTCGACTACTCGGACGAGATCCTCCTGGCGATACTGCAGGCCCTGACCTCCGACTACCCCCGACCGCTGCCCCCCATAGACCTGTGCTTCCTGCCCGAAATGTTCCACCGCGGCCGCCAGTGGAAGGAACTGTCCGTAAGACTGGCCGCCCGGCAGGCTCTGGTCTCCATCTCTGCCAAGAGGATCATGGATAACTATCTGCAGAGTATCGAGGTGGAGAACTGTGATGAATCTGATATCCTGACAGTTTATGAACTCCTGCCGACCCTGTGCCGAGGGATGCCGCCGAACTCCCTTCGAGCTCCCATCGAGAAGACCCTAGGCAGGTCCCACGCTATCGTCTCAAAGACCAAGTCCTCGGACAATCCAGAGGAGCTGCTGTTCGTGAAACTGCTGGTGCTCATCCGGAGATGCTTGGAATCGGAGAAGATACACGACGCCAACAGGAAACTGCTCTCTCAGATGGTCGAGAATTATTATTCTGTTATTGACGAATCAAATGTGTCGTGGGACACATATGTAGAGACGTGCCGAAGTCTATCGTCAGCTCACCTGGAGCGCATGACGTCGCCCTCGTCGTGGTGGGAGGCCAGCGGCGAGGCCTTGAGGCGGGCGTGGCGCGTGAGGTGTGAGGTCGCGCGGGGGGCGCCCGGGGGGATCGCGCTCGTGTGGCTCAACGAGATGATCGACGCTCAAGCTTCCAGTCCACCCGAGCAAGACTTCTCCCTGCGCTGCATGGCGCCGGTACTGCAGGCGGCAGACCCTGGCTCCGCGGCCGCGAGGGACTGGTTCCTGCAGCTGATGGCGCGCACGCAGGTCGCCTTCAATGAAACGGAAGACTTGTCGGCCAAGCTGTACCTGTGCGACGTGTTCGTGCTGAGCGTGGTGACGCTGAGCGGGCACGGCGCGCTGCGGCCCGGGGACGCAGTCGCCGGGGACCGCGCCGCCGCCCGCGCGCTCTTCCCGGCCGCCGTCGCAGCGCTGTTCAGCCGAGAGCCCTGGGAACAGTCTACGCCACAGATCCTGGAATGGTTGTGTCACACCCGGAGCTCTGTGGCGGACCCCCGCATGGCGCAGTGCTGTCAGCGCGGCCTGCTGTCCATGCGGCACGCGGCTCACTTCGCGACGCACAACACTTGGATCAAATTAGAAAGTCACCTCGCCAGAGAAAACATTGAAGACTGA

Protein

MDIENRGPGLELLRAVFLWLTCNPQRDGGSRPWQLLLSLPQGQAKSLLLLACLSCQQICNSSLIERAFSAYSAVTDAAIYQQDKETVRALLPMLARITNELIKHGRDPRPCYILMERCFNLDAAELRTVAGLVLMILADNLPHTSALYLHELFNLCLNIINKYAYTQISINYLIALTLQWLNMPSYLTASALKSASRILDIYQEDAGEDTRMYMTNLNTNKTFQTLLHTDKHLSIVYNLNRNYERLRDNPDKLKCWVSDISSLDNAVKYDMLPLLLGVAMSQNIEGDQEEIVLQSLNILIDLVDYNKDMSVQLLPILLYKISHDISPSIKMECLKALPLMAKSKENVPTIVSILNKLKVNKGVPISFLISLYTSLSETQVRCFPYLQELLVDPGAGRPDDLKWEVDVARALSVKRICEIRGSSHGVELVSVISTLLNRCGDKSGSAATSAALQSIARLWRSASIAPPSTWRALEPKLGRDTRPLVQISVCNLLAEVPALRVSTPDYDWLISASCRRLWAYVADSNHPEVVEAACDALGGYLLDDYKLKDIPEIYRRTVKLPASYCKTPADAARNPEDVLEYIPCEVWPEVFKCSNQAALGGVARLTTRLIEREIKGYRSGVYHLEAKTEPMGYNHLQPFSVIRGLMECFRKQATSPSFDYSDEILLAILQALTSDYPRPLPPIDLCFLPEMFHRGRQWKELSVRLAARQALVSISAKRIMDNYLQSIEVENCDESDILTVYELLPTLCRGMPPNSLRAPIEKTLGRSHAIVSKTKSSDNPEELLFVKLLVLIRRCLESEKIHDANRKLLSQMVENYYSVIDESNVSWDTYVETCRSLSSAHLERMTSPSSWWEASGEALRRAWRVRCEVARGAPGGIALVWLNEMIDAQASSPPEQDFSLRCMAPVLQAADPGSAAARDWFLQLMARTQVAFNETEDLSAKLYLCDVFVLSVVTLSGHGALRPGDAVAGDRAAARALFPAAVAALFSREPWEQSTPQILEWLCHTRSSVADPRMAQCCQRGLLSMRHAAHFATHNTWIKLESHLARENIED

Uniprot

A0A2A4JVU3   A0A2H1W092   A0A194QFE4   A0A194QX04   A0A212ELX0   A0A067QTM1   + More
A0A2J7Q7Z6   A0A2J7Q807   A0A2J7Q7Z1   A0A0L7QXL7   A0A2A3EAI8   A0A088A308   A0A0M9A7H6   E2AZD0   A0A310SGJ3   A0A026WSR1   A0A3L8D8I8   F4WG80   A0A158NT53   A0A154P5F4   A0A195EFH9   A0A151WJE6   A0A195EZR6   A0A195B6B8   A0A151IAK8   A0A0K8VSR4   A0A0K8W2L2   A0A0K8USI9   A0A0K8V3W1   A0A0A1WNI7   A0A0K8TWV5   E2BVS2   A0A1Y1MEH0   A0A0J7KZ56   A0A1B0FPN6   A0A1A9W9M3   A0A1A9VST1   A0A1B0AAY7   A0A1I8NY12   A0A0L0CBA8   A0A1B0BS51   A0A1A9YGH7   A0A1I8N8B6   T1PHB9   A0A034VIG4   A0A0P4VWJ2   D6WTF9   A0A0T6BGP8   B4LMB8   B4J7D8   A0A0Q9X988   B4KSF1   B4GHN8   A0A0M3QV37   Q28ZJ5   B3MF07   A0A3B0JMI2   A0A2P2I2Q4   A0A0C9QBD0   Q8MQP1   A0A1W4UM00   A0A0K8W0Z1   Q9W1Q5   A0A182YQ03   A0A0K8W5U7   B4P9L4   B4I8L9   A0A0J9RJQ7   A0A1B6HFK3   A0A182K8Y7   B3NPD7   B4NMN4   A0A182R082   A0A1S4F3N2   A0A182PGE7   A0A182HMG2   Q7Q7F2   A0A182KW16   Q0IG60   A0A182R2K5   B0VZ36   A0A182XD31   A0A1Q3F5H2   A0A182WAK8   A0A182LU14   A0A182UUC2   E0VQU2   A0A182U189   A0A182GLL5   A0A182GE88   A0A1W4XLG9   A0A2M4CP47  

Pubmed

26354079    22118469    24845553    20798317    24508170    30249741    + More
21719571    21347285    25830018    28004739    26108605    25315136    25348373    18362917    19820115    17994087    18057021    15632085    23185243    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25244985    17550304    22936249    12364791    14747013    17210077    20966253    17510324    20566863    26483478   

EMBL

NWSH01000536    PCG75808.1    ODYU01005556    SOQ46520.1    KQ459053    KPJ04134.1    + More
KQ461073    KPJ09490.1    AGBW02013975    OWR42469.1    KK852949    KDR13366.1    NEVH01016993    PNF24702.1    PNF24705.1    PNF24704.1    KQ414704    KOC63321.1    KZ288322    PBC28206.1    KQ435719    KOX78797.1    GL444207    EFN61169.1    KQ770178    OAD52680.1    KK107111    EZA59023.1    QOIP01000011    RLU16830.1    GL888128    EGI66847.1    ADTU01025540    KQ434809    KZC06418.1    KQ978957    KYN27030.1    KQ983039    KYQ47951.1    KQ981897    KYN33718.1    KQ976579    KYM80051.1    KQ978192    KYM96532.1    GDHF01010383    JAI41931.1    GDHF01007013    JAI45301.1    GDHF01022655    JAI29659.1    GDHF01018816    JAI33498.1    GBXI01014314    JAC99977.1    GDHF01033573    JAI18741.1    GL450957    EFN80200.1    GEZM01033997    JAV83991.1    LBMM01001720    KMQ95847.1    CCAG010023233    JRES01000655    KNC29505.1    JXJN01019518    KA648166    AFP62795.1    GAKP01016688    JAC42264.1    GDRN01102852    JAI58167.1    KQ971352    EFA06297.1    LJIG01000451    KRT86489.1    CH940648    EDW62013.1    KRF80384.1    KRF80385.1    KRF80386.1    CH916367    EDW01062.1    CH933808    KRG04677.1    EDW09456.1    CH479183    EDW36008.1    CP012524    ALC41703.1    CM000071    EAL25618.1    KRT02416.1    KRT02417.1    KRT02418.1    CH902619    EDV36628.1    OUUW01000001    SPP74769.1    IACF01002669    LAB68314.1    GBYB01000554    JAG70321.1    AY128471    AAM75064.1    GDHF01032825    GDHF01007502    JAI19489.1    JAI44812.1    AE013599    BT150465    AAF47000.2    AJP62087.1    GDHF01005877    JAI46437.1    CM000158    EDW92322.1    CH480824    EDW56944.1    CM002911    KMY96027.1    GECU01034315    JAS73391.1    CH954179    EDV56800.1    CH964282    EDW85623.1    AXCN02000905    AAAB01008960    EAA11021.3    CH477261    EAT45697.1    DS231813    EDS25627.1    GFDL01012239    JAV22806.1    AXCM01003851    DS235442    EEB15748.1    JXUM01013755    JXUM01013756    JXUM01013757    JXUM01013758    JXUM01013759    KQ560384    KXJ82677.1    JXUM01010147    KQ560300    KXJ83169.1    GGFL01002916    MBW67094.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000027135    UP000235965    + More
UP000053825    UP000242457    UP000005203    UP000053105    UP000000311    UP000053097    UP000279307    UP000007755    UP000005205    UP000076502    UP000078492    UP000075809    UP000078541    UP000078540    UP000078542    UP000008237    UP000036403    UP000092444    UP000091820    UP000078200    UP000092445    UP000095300    UP000037069    UP000092460    UP000092443    UP000095301    UP000007266    UP000008792    UP000001070    UP000009192    UP000008744    UP000092553    UP000001819    UP000007801    UP000268350    UP000192221    UP000000803    UP000076408    UP000002282    UP000001292    UP000075881    UP000008711    UP000007798    UP000075886    UP000075885    UP000007062    UP000075882    UP000008820    UP000075900    UP000002320    UP000076407    UP000075920    UP000075883    UP000009046    UP000075902    UP000069940    UP000249989    UP000192223   

PRIDE

Q8MQP1    Q9W1Q5   

Pfam

PF12530   DUF3730        + More
PF11229   Focadhesin
PF00531   Death
PF01274   Malate_synthase

Interpro

IPR022542   DUF3730        + More
IPR016024   ARM-type_fold       
IPR021392   Focadhesin       
IPR000488   Death_domain       
IPR011029   DEATH-like_dom_sf       
IPR001465   Malate_synthase       
IPR006252   Malate_synthA       
IPR011076   Malate_synth-like_sf       

SUPFAM

SSF48371   SSF48371        + More
SSF47986   SSF47986       
SSF51645   SSF51645       

ProteinModelPortal

A0A2A4JVU3   A0A2H1W092   A0A194QFE4   A0A194QX04   A0A212ELX0   A0A067QTM1   + More
A0A2J7Q7Z6   A0A2J7Q807   A0A2J7Q7Z1   A0A0L7QXL7   A0A2A3EAI8   A0A088A308   A0A0M9A7H6   E2AZD0   A0A310SGJ3   A0A026WSR1   A0A3L8D8I8   F4WG80   A0A158NT53   A0A154P5F4   A0A195EFH9   A0A151WJE6   A0A195EZR6   A0A195B6B8   A0A151IAK8   A0A0K8VSR4   A0A0K8W2L2   A0A0K8USI9   A0A0K8V3W1   A0A0A1WNI7   A0A0K8TWV5   E2BVS2   A0A1Y1MEH0   A0A0J7KZ56   A0A1B0FPN6   A0A1A9W9M3   A0A1A9VST1   A0A1B0AAY7   A0A1I8NY12   A0A0L0CBA8   A0A1B0BS51   A0A1A9YGH7   A0A1I8N8B6   T1PHB9   A0A034VIG4   A0A0P4VWJ2   D6WTF9   A0A0T6BGP8   B4LMB8   B4J7D8   A0A0Q9X988   B4KSF1   B4GHN8   A0A0M3QV37   Q28ZJ5   B3MF07   A0A3B0JMI2   A0A2P2I2Q4   A0A0C9QBD0   Q8MQP1   A0A1W4UM00   A0A0K8W0Z1   Q9W1Q5   A0A182YQ03   A0A0K8W5U7   B4P9L4   B4I8L9   A0A0J9RJQ7   A0A1B6HFK3   A0A182K8Y7   B3NPD7   B4NMN4   A0A182R082   A0A1S4F3N2   A0A182PGE7   A0A182HMG2   Q7Q7F2   A0A182KW16   Q0IG60   A0A182R2K5   B0VZ36   A0A182XD31   A0A1Q3F5H2   A0A182WAK8   A0A182LU14   A0A182UUC2   E0VQU2   A0A182U189   A0A182GLL5   A0A182GE88   A0A1W4XLG9   A0A2M4CP47  

KEGG

101740679    no KO assigned | (RefSeq) focadhesin

GO

GO:0007165   GO:0016021   GO:0004474   GO:0006097   GO:0005488   GO:0031209   GO:0032403   GO:0003676   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

PANTHER

PTHR42902  

Length:

1051

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.59565

Exp number, first 60 AAs:

0.00222

Total prob of N-in:

0.02061

outside

1  -  1051

 

 

Pi

222.159824

Theta

182.335866

Tajima's D

0.884532

CLR

0.184081

CSRT

0.625418729063547

Interpretation

Uncertain