Gene

KWMTBOMO11196  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012662

Annotation

PREDICTED:_focadhesin_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr19(+):334928-337646      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.223 Nuclear   Reliability : 1.576

CDS

ATGGACGAAATCGAATACAAATTGAAAACTAACAACAGTGTCTTAATAGTCAACGCAGTAGAAAAGTTGATAACATTGATAAAATCAAAATTCAAACGTGAAGAACGACAGAGATTCGTTTTGGAAAACGAGGAATTGAAGTTTTTGAGGAAGAAATGTTCGTCCAAAGATCCTGTTGTGAGCCTGACAGCCTGTCAAGGACTCCTAGCGTTGGTGGAACTCGGTGTTTTGGAAATACCGCACACAATGTCCACTGTAGTAACACTCATACCGACTGCGCATAATTACTCCGCGATAATCTCGACAATGGCAGGTCTTCTCATTCTCGATCTGAAGTCGCGTCTCGATGGCTACAAATGTCAGTTCAATCTCAAATCACCAAAGCATCCATTTATAACAGTACTGGAGAAGAACAAAGGTGCCGAAGATGATGTGCTGGCTCAGATGCATTCTCTTTGTACGCATCCTGATTACACGTAA

Protein

MDEIEYKLKTNNSVLIVNAVEKLITLIKSKFKREERQRFVLENEELKFLRKKCSSKDPVVSLTACQGLLALVELGVLEIPHTMSTVVTLIPTAHNYSAIISTMAGLLILDLKSRLDGYKCQFNLKSPKHPFITVLEKNKGAEDDVLAQMHSLCTHPDYT

Uniprot

H9JT00   A0A212ELU4   A0A0L7KVK3   A0A2H1W092   A0A2A4JVU3   A0A194QX04   + More
A0A194QFE4   A0A2W1BG62   A0A2J7Q7Y9   A0A067QTM1   A0A2J7Q7Z1   A0A2J7Q807   E2AZD0   A0A0J7KZ56   A0A195B6B8   A0A158NT53   A0A151WJE6   A0A1B6FK50   A0A1B6HFK3   A0A1B6LFK3   A0A1B6MQZ3   A0A3L8D8I8   A0A195EZR6   E2BVS2   A0A0L7QXL7   A0A154P5F4   A0A0T6BFW7   A0A2A3EAI8   A0A088A308   A0A151IAK8   A0A0M9A7H6   A0A1B6DXG3   A0A310SGJ3   A0A195EFH9   A0A034VL61   A0A210PEJ5   A0A0A1WNI7   E7FGT5   B4J7D8   A0A0K8V3W1   A0A0K8W5U7   A0A0K8W0Z1   A0A0K8TWV5   Q28ZJ5   D6WTF9   A0A1I8N8B6   A0A1I8NY12   A0A3B4E3M0   B4GHN8   A7SF91   A0A1W4XLG9   A0A1B0GI29   B4LMB8   W8AUF7   B3NPD7   A0A3B1JH42   A0A3B1IMZ8   W5KW87   B4P9L4   A0A1Y1MEH0   A0A3B0JMI2   B3MF07   B4QIN8   A0A1A9W9M3   A0A1B0AAY7   A0A1A9VST1   A0A1A9YGH7   A0A1B0BS51   A0A1B0FPN6   W5MZL7   A0A0J9RJQ7   A0A1B0GJP2   A0A2D0RCS5   A0A2D0RAV3   Q8MQP1   Q9W1Q5   A0A1W4UM00   B4NMN4   M3ZZL7   A0A3B5PNB4   A0A3B5Q458   A0A3Q3KNU3   A0A3Q3KPP2   A0A315V784   A0A3Q3R8V0   A0A1L8HXW7   A0A0S7K3K1   A0A0L0CBA8   A0A0M3QV37   A0A087XI00   B4I8L9   A0A093PX40   A0A3S2M4X9   B4KSF1   A0A3B3ZXC9   A0A2R5LDI4   A0A3Q2C7A4  

Pubmed

19121390    22118469    26227816    26354079    28756777    24845553    + More
20798317    21347285    30249741    25348373    28812685    25830018    23594743    17994087    15632085    23185243    18362917    19820115    25315136    17615350    18057021    24495485    25329095    17550304    28004739    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    23542700    29703783    27762356    26108605    25463417   

EMBL

BABH01038948    BABH01038949    AGBW02013975    OWR42470.1    JTDY01005323    KOB67111.1    + More
ODYU01005556    SOQ46520.1    NWSH01000536    PCG75808.1    KQ461073    KPJ09490.1    KQ459053    KPJ04134.1    KZ150068    PZC74109.1    NEVH01016993    PNF24701.1    KK852949    KDR13366.1    PNF24704.1    PNF24705.1    GL444207    EFN61169.1    LBMM01001720    KMQ95847.1    KQ976579    KYM80051.1    ADTU01025540    KQ983039    KYQ47951.1    GECZ01019207    JAS50562.1    GECU01034315    JAS73391.1    GEBQ01017557    JAT22420.1    GEBQ01001635    JAT38342.1    QOIP01000011    RLU16830.1    KQ981897    KYN33718.1    GL450957    EFN80200.1    KQ414704    KOC63321.1    KQ434809    KZC06418.1    LJIG01000692    KRT86248.1    KZ288322    PBC28206.1    KQ978192    KYM96532.1    KQ435719    KOX78797.1    GEDC01006969    JAS30329.1    KQ770178    OAD52680.1    KQ978957    KYN27030.1    GAKP01016689    JAC42263.1    NEDP02076748    OWF34881.1    GBXI01014314    JAC99977.1    CU914308    CU929552    CU972454    FO904823    CH916367    EDW01062.1    GDHF01018816    JAI33498.1    GDHF01005877    JAI46437.1    GDHF01032825    GDHF01007502    JAI19489.1    JAI44812.1    GDHF01033573    JAI18741.1    CM000071    EAL25618.1    KRT02416.1    KRT02417.1    KRT02418.1    KQ971352    EFA06297.1    CH479183    EDW36008.1    DS469642    EDO37644.1    AJWK01011191    AJWK01011192    AJWK01011193    CH940648    EDW62013.1    KRF80384.1    KRF80385.1    KRF80386.1    GAMC01014115    JAB92440.1    CH954179    EDV56800.1    CM000158    EDW92322.1    GEZM01033997    JAV83991.1    OUUW01000001    SPP74769.1    CH902619    EDV36628.1    CM000362    EDX08366.1    JXJN01019518    CCAG010023233    AHAT01031580    AHAT01031581    AHAT01031582    AHAT01031583    AHAT01031584    AHAT01031585    AHAT01031586    CM002911    KMY96027.1    AJWK01021993    AY128471    AAM75064.1    AE013599    BT150465    AAF47000.2    AJP62087.1    CH964282    EDW85623.1    NHOQ01002757    PWA14794.1    CM004466    OCU00956.1    GBYX01221939    JAO71909.1    JRES01000655    KNC29505.1    CP012524    ALC41703.1    AYCK01024967    AYCK01024968    AYCK01024969    AYCK01024970    AYCK01024971    AYCK01024972    AYCK01024973    AYCK01024974    AYCK01024975    AYCK01024976    CH480824    EDW56944.1    KL669492    KFW76587.1    CM012454    RVE60156.1    CH933808    EDW09456.1    GGLE01003457    MBY07583.1   

Proteomes

UP000005204    UP000007151    UP000037510    UP000218220    UP000053240    UP000053268    + More
UP000235965    UP000027135    UP000000311    UP000036403    UP000078540    UP000005205    UP000075809    UP000279307    UP000078541    UP000008237    UP000053825    UP000076502    UP000242457    UP000005203    UP000078542    UP000053105    UP000078492    UP000242188    UP000000437    UP000001070    UP000001819    UP000007266    UP000095301    UP000095300    UP000261440    UP000008744    UP000001593    UP000192223    UP000092461    UP000008792    UP000008711    UP000018467    UP000002282    UP000268350    UP000007801    UP000000304    UP000091820    UP000092445    UP000078200    UP000092443    UP000092460    UP000092444    UP000018468    UP000221080    UP000000803    UP000192221    UP000007798    UP000002852    UP000261640    UP000261600    UP000186698    UP000037069    UP000092553    UP000028760    UP000001292    UP000053258    UP000009192    UP000261520    UP000265020   

PRIDE

H9JT00    E7FGT5    Q8MQP1    Q9W1Q5   

Pfam

PF12530   DUF3730        + More
PF11229   Focadhesin
PF00531   Death

Interpro

IPR022542   DUF3730        + More
IPR016024   ARM-type_fold       
IPR021392   Focadhesin       
IPR000488   Death_domain       
IPR011029   DEATH-like_dom_sf       

SUPFAM

SSF48371   SSF48371        + More
SSF47986   SSF47986       

ProteinModelPortal

H9JT00   A0A212ELU4   A0A0L7KVK3   A0A2H1W092   A0A2A4JVU3   A0A194QX04   + More
A0A194QFE4   A0A2W1BG62   A0A2J7Q7Y9   A0A067QTM1   A0A2J7Q7Z1   A0A2J7Q807   E2AZD0   A0A0J7KZ56   A0A195B6B8   A0A158NT53   A0A151WJE6   A0A1B6FK50   A0A1B6HFK3   A0A1B6LFK3   A0A1B6MQZ3   A0A3L8D8I8   A0A195EZR6   E2BVS2   A0A0L7QXL7   A0A154P5F4   A0A0T6BFW7   A0A2A3EAI8   A0A088A308   A0A151IAK8   A0A0M9A7H6   A0A1B6DXG3   A0A310SGJ3   A0A195EFH9   A0A034VL61   A0A210PEJ5   A0A0A1WNI7   E7FGT5   B4J7D8   A0A0K8V3W1   A0A0K8W5U7   A0A0K8W0Z1   A0A0K8TWV5   Q28ZJ5   D6WTF9   A0A1I8N8B6   A0A1I8NY12   A0A3B4E3M0   B4GHN8   A7SF91   A0A1W4XLG9   A0A1B0GI29   B4LMB8   W8AUF7   B3NPD7   A0A3B1JH42   A0A3B1IMZ8   W5KW87   B4P9L4   A0A1Y1MEH0   A0A3B0JMI2   B3MF07   B4QIN8   A0A1A9W9M3   A0A1B0AAY7   A0A1A9VST1   A0A1A9YGH7   A0A1B0BS51   A0A1B0FPN6   W5MZL7   A0A0J9RJQ7   A0A1B0GJP2   A0A2D0RCS5   A0A2D0RAV3   Q8MQP1   Q9W1Q5   A0A1W4UM00   B4NMN4   M3ZZL7   A0A3B5PNB4   A0A3B5Q458   A0A3Q3KNU3   A0A3Q3KPP2   A0A315V784   A0A3Q3R8V0   A0A1L8HXW7   A0A0S7K3K1   A0A0L0CBA8   A0A0M3QV37   A0A087XI00   B4I8L9   A0A093PX40   A0A3S2M4X9   B4KSF1   A0A3B3ZXC9   A0A2R5LDI4   A0A3Q2C7A4  

KEGG

101740679    no KO assigned | (RefSeq) focadhesin

GO

GO:0007165   GO:0016021   GO:0005925  

Length:

159

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

25.63445

Exp number, first 60 AAs:

1.39478

Total prob of N-in:

0.67689

outside

1  -  159

 

 

Pi

215.697987

Theta

193.043418

Tajima's D

0.394473

CLR

0

CSRT

0.48247587620619

Interpretation

Uncertain