Gene

KWMTBOMO11194

Pre Gene Modal

BGIBMGA012661

Annotation

PREDICTED:_3-ketoacyl-CoA_thiolase?_mitochondrial-like_[Papilio_polytes]

Location

Bomo_Chr19(+):317918-328123      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.241 Mitochondrial   Reliability : 1.131

CDS

ATGTCTTTGGCAGGGAAAGGGATATTCATAATTGGCGCAAAACGTACGCCATTTTGCAACTATGGCGGCCCGCTAAGAGACGTACAAGCGTGCCATCTTTTCGCAGCCGCAGCAAAGGATGCAATTCGTGCTGCCAATATTGAGGCTAGCGTAATAGATCAAACTGTGGTCGGCAATGTTAATTATCTAAGTCAATGTGATGGAGGAAAGACTCCAAGATATTGCGGGATTTATTCCGGATTACCCATTGAGAGACCAGCCTTAGGCGTCAGCAAAGCCTGCGGTACTGGAATCCAAGCCGTCATTTCTGGTGCTGTGGATATTGTTTTCGGAACGTCCAATGTCTGTTTATCTGGAGGCACAGAGCAAATGTCCTCGCTACCGATGTTAGTCAGAAAATTGCGATTCGGAACTGCTCTTGGCGCTTCATATCAATTCGAGGATCATATACAGAGGGAGTTCTTGGACAGTCACACGGGGAGGTCGTTACAGAGAATGGCCGAGGAGACGTCTAAGAAATACGGCATTGGAAGAAAGAATGTTGACGATTATACTGTACAGAGTTACGATAAATGGAAAGAAGCAGTGAGATCGAAACTGTTCATTAACGAACTAACAAGCCTTAGTGTGAAGATTAAAAAGAAAGATGTTCTAGTTGAGGCAGACCAACCGTGCCAACTGGATGTTAGCGTTGAAAGTTTAAACGCACTTCCTGCGTTAATAGACAACGGGGATGTTGTAACTGCCGGCAATTCTGCTGCACCAGCGGATGGCGCTGCTGCCCTAGTCCTCGCGAGCGAAGAATCCGTTTTAACCCAAAACCTAAAACCCCTGGCAAGATTGGTCGGGTGGACAACAGTCGGGGTAGACCCTCAGGACACTGCAGCAGGAGCTATTGAAGCCGTGAGGAAGTTGTTGATCCAACATAAATATGGAGTCAACGATGTAGATTTATTTGAGATAAACGAAGTTTTCGCTTCACAAGCATTAATAGCTGCGATCGAATTAAAATTGGACGTCTCAAAACTGAACGTGAATGGCGGAGCTCTGGCTTTCGGAAATCCGGTGGCCGCTACCGGGGCTAGGATGATCGTCCATCTTGTTCATGAACTAAGACGACGCAACTTGAAAAGGGCAGTCGCCGCTTCCAGCTGTGGGGGCGGACAAGGCGTGGCTGTACTGTTGGAGAATACGGGATAA

Protein

MSLAGKGIFIIGAKRTPFCNYGGPLRDVQACHLFAAAAKDAIRAANIEASVIDQTVVGNVNYLSQCDGGKTPRYCGIYSGLPIERPALGVSKACGTGIQAVISGAVDIVFGTSNVCLSGGTEQMSSLPMLVRKLRFGTALGASYQFEDHIQREFLDSHTGRSLQRMAEETSKKYGIGRKNVDDYTVQSYDKWKEAVRSKLFINELTSLSVKIKKKDVLVEADQPCQLDVSVESLNALPALIDNGDVVTAGNSAAPADGAAALVLASEESVLTQNLKPLARLVGWTTVGVDPQDTAAGAIEAVRKLLIQHKYGVNDVDLFEINEVFASQALIAAIELKLDVSKLNVNGGALAFGNPVAATGARMIVHLVHELRRRNLKRAVAASSCGGGQGVAVLLENTG

Similarity

Belongs to the thiolase-like superfamily. Thiolase family.

Uniprot

H9JSZ9   A0A2A4JUY4   A0A2W1BLF1   A0A291P162   A0A2H1W0C5   M4MBJ5   + More
A0A194QF73   A0A194QVJ5   A0A212ELV4   M4MBK9   H9JSZ8   A0A291P148   A0A291P0Z9   M4M672   M4M667   A0A2A4JWP2   A0A2W1BMK7   I4DP15   A0A1Q3G5I7   M4M6W2   A0A088MCZ0   A0A291P0X8   A0A291P134   A0A2A4JUV2   A0A0P0E5G4   A0A088M9J5   A0A0P0EA86   A0A1V0M8A3   M4M7X3   B7XEI5   A0A1Q3G5I8   A0A2H1W083   I4DN30   A0A1L8D6E7   A0A2S2R8V6   A0A0P4VLL1   C6L8Q2   A0A224XDT7   R4FQS6   A0A3S2LBN8   A0A0K8TLC7   W8B428   A0A088AHJ0   K7IV43   A0A2A3EA37   A0A1V0M8A7   J9K576   A0A0A1XGB7   A0A232FGB8   A0A336MAM4   A0A1W4VXQ2   B3N8J8   Q9VL70   B4MZD5   A0A0A9X037   U5EL67   B4JE38   A0A1B6C846   B4NYN8   A0A2J7R5D0   A0A3B0KIR0   Q29NE1   B4G7V7   B4LRD1   A0A182Y864   B4KJE5   A0A154PTM8   A0A182WB89   A0A2M3ZGQ5   A0A0J9QZ43   A0A2M3Z3U7   A0A2M3Z4A9   A0A1S3DBF4   A0A1W4WLY9   A0A0L0CH53   A0A034WJD1   A0A0C9PN07   A0A067RE26   A0A1Y1NHJ6   A0A0K8VB97   A0A182MLQ9   A0A1S3DA08   A0A2M4BPZ5   A0A2M4BQ82   Q1HQG3   A0A2M4BPY8   A0A182VD17   A0A182U0X2   A0A182X297   A0A182L3Y7   Q7QIF7   A0A182I6F8   B4HWC3   A0A182G6S7   B3MPA6   A0A023ERH3   A0A2M4AAZ6   Q16S56   A0A2M4AAT1  

Pubmed

19121390    28756777    28986331    23294019    26354079    22118469    + More
22651552    26385554    26445454    28349297    27129103    26369729    24495485    20075255    25830018    28648823    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25401762    26823975    17550304    15632085    25244985    22936249    26108605    25348373    24845553    28004739    17204158    20966253    12364791    14747013    17210077    26483478    24945155    17510324   

EMBL

BABH01038945    BABH01038946    BABH01038947    NWSH01000536    PCG75821.1    KZ150068    + More
PZC74107.1    MF706195    ATJ44622.1    ODYU01005556    SOQ46518.1    JX846986    AGG55003.1    KQ459053    KPJ04132.1    KQ461073    KPJ09492.1    AGBW02013975    OWR42472.1    JX847001    AGG55018.1    MF706185    ATJ44612.1    MF687661    ATJ44587.1    JX847000    AGG55017.1    JX846985    AGG55002.1    PCG75820.1    PZC74106.1    AK403244    BAM19655.1    GEYN01000172    JAV44817.1    JX846982    AGG54999.1    KJ579207    AIN34683.1    MF687641    ATJ44567.1    MF706169    ATJ44596.1    PZC74103.1    PCG75817.1    KT261708    ALJ30248.1    KJ579213    AIN34689.1    KT261728    ALJ30268.1    KU755502    ARD71212.1    JX846998    AGG55015.1    AB466326    BAH03386.1    GEYN01000173    JAV44816.1    SOQ46515.1    AK402698    BAM19320.1    GEYN01000164    JAV01965.1    GGMS01016917    MBY86120.1    GDKW01001282    JAI55313.1    AB516425    BAH96561.1    GFTR01005790    JAW10636.1    GAHY01000244    JAA77266.1    RSAL01000270    RVE43181.1    GDAI01002637    JAI14966.1    GAMC01018565    GAMC01018564    GAMC01018562    GAMC01018561    JAB87991.1    AAZX01001202    KZ288310    PBC28595.1    KU755510    ARD71220.1    ABLF02027851    GBXI01004280    JAD10012.1    NNAY01000245    OXU29742.1    UFQT01000822    SSX27392.1    CH954177    EDV58421.1    AE014134    AY089528    AAF52826.1    AAL90266.1    CH963913    EDW77408.1    GBHO01031506    GBRD01004592    GDHC01001442    JAG12098.1    JAG61229.1    JAQ17187.1    GANO01001545    JAB58326.1    CH916368    EDW03558.1    GEDC01027694    JAS09604.1    CM000157    EDW88702.1    NEVH01006994    PNF36030.1    OUUW01000010    SPP85646.1    CH379060    EAL33401.1    CH479180    EDW28455.1    CH940649    EDW64601.1    CH933807    EDW12520.1    KQ435119    KZC14708.1    GGFM01006985    MBW27736.1    CM002910    KMY89357.1    GGFM01002443    MBW23194.1    GGFM01002582    MBW23333.1    JRES01000384    KNC31743.1    GAKP01004742    JAC54210.1    GBYB01002543    JAG72310.1    KK852527    KDR22017.1    GEZM01002451    JAV97249.1    GDHF01016524    JAI35790.1    AXCM01006679    GGFJ01006014    MBW55155.1    GGFJ01006105    MBW55246.1    DQ440481    ABF18514.1    GGFJ01006015    MBW55156.1    AAAB01008807    EAA04232.2    APCN01003635    CH480818    EDW52318.1    JXUM01045461    KQ561439    KXJ78588.1    CH902620    EDV32225.1    GAPW01001820    JAC11778.1    GGFK01004561    MBW37882.1    CH477682    EAT37297.1    EJY57875.1    GGFK01004566    MBW37887.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000005203    UP000002358    UP000242457    UP000007819    UP000215335    UP000192221    UP000008711    UP000000803    UP000007798    UP000001070    UP000002282    UP000235965    UP000268350    UP000001819    UP000008744    UP000008792    UP000076408    UP000009192    UP000076502    UP000075920    UP000079169    UP000192223    UP000037069    UP000027135    UP000075883    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000001292    UP000069940    UP000249989    UP000007801    UP000008820   

PRIDE

H9JSZ9    H9JSZ8    C6L8Q2    A0A088AHJ0    Q9VL70   

Pfam

PF02803   Thiolase_C        + More
PF00108   Thiolase_N
PF07406   NICE-3
PF10545   MADF_DNA_bdg

Interpro

IPR020615   Thiolase_acyl_enz_int_AS        + More
IPR020616   Thiolase_N       
IPR002155   Thiolase       
IPR020617   Thiolase_C       
IPR016039   Thiolase-like       
IPR020613   Thiolase_CS       
IPR020610   Thiolase_AS       
IPR010876   NICE-3_prd       
IPR006578   MADF-dom       

SUPFAM

SSF53901   SSF53901       

Gene 3D

3.40.47.10    

CDD

cd00751  thiolase

ProteinModelPortal

H9JSZ9   A0A2A4JUY4   A0A2W1BLF1   A0A291P162   A0A2H1W0C5   M4MBJ5   + More
A0A194QF73   A0A194QVJ5   A0A212ELV4   M4MBK9   H9JSZ8   A0A291P148   A0A291P0Z9   M4M672   M4M667   A0A2A4JWP2   A0A2W1BMK7   I4DP15   A0A1Q3G5I7   M4M6W2   A0A088MCZ0   A0A291P0X8   A0A291P134   A0A2A4JUV2   A0A0P0E5G4   A0A088M9J5   A0A0P0EA86   A0A1V0M8A3   M4M7X3   B7XEI5   A0A1Q3G5I8   A0A2H1W083   I4DN30   A0A1L8D6E7   A0A2S2R8V6   A0A0P4VLL1   C6L8Q2   A0A224XDT7   R4FQS6   A0A3S2LBN8   A0A0K8TLC7   W8B428   A0A088AHJ0   K7IV43   A0A2A3EA37   A0A1V0M8A7   J9K576   A0A0A1XGB7   A0A232FGB8   A0A336MAM4   A0A1W4VXQ2   B3N8J8   Q9VL70   B4MZD5   A0A0A9X037   U5EL67   B4JE38   A0A1B6C846   B4NYN8   A0A2J7R5D0   A0A3B0KIR0   Q29NE1   B4G7V7   B4LRD1   A0A182Y864   B4KJE5   A0A154PTM8   A0A182WB89   A0A2M3ZGQ5   A0A0J9QZ43   A0A2M3Z3U7   A0A2M3Z4A9   A0A1S3DBF4   A0A1W4WLY9   A0A0L0CH53   A0A034WJD1   A0A0C9PN07   A0A067RE26   A0A1Y1NHJ6   A0A0K8VB97   A0A182MLQ9   A0A1S3DA08   A0A2M4BPZ5   A0A2M4BQ82   Q1HQG3   A0A2M4BPY8   A0A182VD17   A0A182U0X2   A0A182X297   A0A182L3Y7   Q7QIF7   A0A182I6F8   B4HWC3   A0A182G6S7   B3MPA6   A0A023ERH3   A0A2M4AAZ6   Q16S56   A0A2M4AAT1  

PDB

4C2K     E-value=2.66443e-70,     Score=674

KEGG

101738252    K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] | (RefSeq) 3-ketoacyl-CoA thiolase, mitochondrial-

PATHWAY

00062    Fatty acid elongation - Bombyx mori (domestic silkworm)
00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
00280    Valine, leucine and isoleucine degradation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016747   GO:0003985   GO:0016746   GO:0003988   GO:0005739   GO:0006635   GO:0003824   GO:0008152   GO:0003676   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0006810  

Length:

399

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.56552

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.00231

outside

1  -  399

 

 

Pi

178.330515

Theta

134.802606

Tajima's D

0.970074

CLR

0.085117

CSRT

0.647117644117794

Interpretation

Uncertain