Gene

KWMTBOMO11193  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012660

Annotation

PREDICTED:_3-ketoacyl-CoA_thiolase?_mitochondrial-like_[Bombyx_mori]

Location

Bomo_Chr19(+):308518-316554      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.263

CDS

ATGGCCGTCGCTGTCAACAAAGGCATCTTCATAGTCGCGGCGAAGAGGACCCCGTTCGGAAAAATGGGGGGTCTGTTGAAAGACATTCATCCATCCGACTTACTAGCAGTCGCCGCTAAGGAGTCTTTCAAGGCCGGAAATGTTGCTCCTGCTTTGGTCGACACTGTCAACATTGGACAGGTTTATTCGCTAAGCGGAACATCAGACGGTGGTTTATCACCCCGTCACGCAGCCCTGAAATCAGGCGTGCCACAAGAAAAACCTGCACTGGGCGTCAACAGATTGTGTGGATCAGGATTCCAAGCTGTCATTAACAGTGCCCAAGATATTTTAACAGGTACGGCTCAGATTTCCTTAGCAGGTGGCACGGAGAACATGTCAGCAGTTCCGTTTGTCGTCAGGAACACCCGTTTCGGAGTACCTCTGGGCGTGAATATTCCCTTCGAAGATTCCCTCTCAGCGGGATCTCTGGACACATACTGCAACTACACTATGCCTCAAACTGCTGAAAATTTGGCTGAGAAATACGAACTCAAAAGGGGAGAAGTTGATCAGTTTTCGCTTCAATCCCAGCAGAGATGGAAAACAGCGCACGACAGCGGCGTCTTCAAGGCTGAGATGGCCCCGGTTACAGTCAAAGTGAAAAGGCAAGAAGTACTGGTGGACAGAGACGAGCATCCTAGACCGGAGACCAACACCGAATCGCTAAGTAAATTACCAGCGTTGTTCAGGAAGGGAGGAGTAGTGACGGCTGGAAATTCCTCGGGCGTAAATGATGGTGCCGGTACTGTGATTCTCGCCAGCGAAGAAGCTGTCAAGCAACACGGTCTGACTCCACTGGTTCGTCTCCTCGGCTGGTCGTTTGTTGGTGTGGACCCCAGCATTATGGGTATAGGACCTGTTCCCGCCATCAACAATCTACTATCCGCCACTGGGCTTAAACTTGGCGATATTGACTTGGTAGAGATTAATGAAGCGTTCGCCGCTCAGACTCTAGCTTGTATTAAAGAGCTAAACTTAGACGAAAGTAAATTAAATGTGAACGGAGGGGCCATCGCTATGGGACATCCTGTTGGCGCGTCTGGGGCCAGGATCACAGCTCATTTAGCTCATGAGCTCAGACGTCGTGGTTTGAAGAGAGGTATCGGCTCAGCATGCATTGGAGGAGGGCAAGGAATCGCTTTGCTACTCGAAACTATATAA

Protein

MAVAVNKGIFIVAAKRTPFGKMGGLLKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVYSLSGTSDGGLSPRHAALKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLAGGTENMSAVPFVVRNTRFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYELKRGEVDQFSLQSQQRWKTAHDSGVFKAEMAPVTVKVKRQEVLVDRDEHPRPETNTESLSKLPALFRKGGVVTAGNSSGVNDGAGTVILASEEAVKQHGLTPLVRLLGWSFVGVDPSIMGIGPVPAINNLLSATGLKLGDIDLVEINEAFAAQTLACIKELNLDESKLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKRGIGSACIGGGQGIALLLETI

Similarity

Belongs to the thiolase-like superfamily. Thiolase family.

Uniprot

H9JSZ8   A0A0P0EA86   A0A2H1W0C5   A0A1V0M8A7   A0A3S2LBN8   A0A2W1BMK7   + More
A0A291P148   A0A291P0Z9   M4M672   A0A2A4JWP2   M4M667   A0A0L7LDR5   A0A088MCZ0   A0A212ELV4   A0A1Q3G5I8   A0A194QVJ5   A0A2W1BK72   A0A1Q3G5J3   A0A2A4JVH8   A0A1L8D6E7   B7XEI5   M4M6W2   A0A088M9J5   A0A2H1W0G0   A0A2A4JUV2   M4M7X3   A0A291P0X8   A0A291P134   A0A0P0E5G4   A0A1V0M8A3   A0A2H1W083   I4DP15   A0A224XDT7   C6L8Q2   I4DN30   A0A154PTM8   A0A3L8DQK3   M4M648   A0A194QF73   A0A0P4VLL1   A0A1B6C846   R4FQS6   A0A2J7R5D0   A0A1S3DBF4   A0A1W4WLY9   A0A1S3DA08   A0A088AHJ0   K7IV43   D6WSI8   E2ARH3   U5EL67   A0A232FGB8   A0A182N7D7   A0A2S2R8V6   A0A182QTK1   A0A151K395   A0A182Y864   A0A0A9X037   A0A336MAM4   A0A182WB89   A0A151IDY0   A0A2M3ZGQ5   Q1HQG3   A0A2A3EA37   A0A182FFL4   A0A0K8TLC7   A0A2M3Z3U7   J9K576   A0A2M3Z4A9   T1DSQ4   A0A2M4BPZ5   A0A2M4AAT1   A0A1L8DZ48   A0A2M4AAZ6   A0A1L8DZ65   A0A182VD17   A0A182U0X2   A0A182X297   A0A182L3Y7   Q7QIF7   A0A182I6F8   B4MZD5   A0A2M4BQ82   A0A158NQB2   A0A2M4BPY8   A0A195FU57   F4WA98   W5J4S4   A0A182MLQ9   A0A2H8TYJ7   A0A182K4B8   B0W5M7   A0A182RUF2   A0A182IJR5   A0A1Q3FEW7   A0A067RE26   A0A182G6S7   A0A0L0CH53   A0A023ERH3   A0A0A1XGB7  

Pubmed

19121390    26445454    28349297    28756777    28986331    23294019    + More
26227816    26385554    22118469    26354079    22651552    30249741    27129103    20075255    18362917    19820115    20798317    28648823    25244985    25401762    26823975    17204158    26369729    20966253    12364791    14747013    17210077    17994087    21347285    21719571    20920257    23761445    24845553    26483478    26108605    24945155    25830018   

EMBL

BABH01038945    KT261728    ALJ30268.1    ODYU01005556    SOQ46518.1    KU755510    + More
ARD71220.1    RSAL01000270    RVE43181.1    KZ150068    PZC74106.1    MF706185    ATJ44612.1    MF687661    ATJ44587.1    JX847000    AGG55017.1    NWSH01000536    PCG75820.1    JX846985    AGG55002.1    JTDY01001527    KOB73648.1    KJ579207    AIN34683.1    AGBW02013975    OWR42472.1    GEYN01000173    JAV44816.1    KQ461073    KPJ09492.1    PZC74105.1    GEYN01000177    JAV44812.1    PCG75819.1    GEYN01000164    JAV01965.1    AB466326    BAH03386.1    JX846982    AGG54999.1    KJ579213    AIN34689.1    SOQ46517.1    PCG75817.1    JX846998    AGG55015.1    MF687641    ATJ44567.1    MF706169    ATJ44596.1    PZC74103.1    KT261708    ALJ30248.1    KU755502    ARD71212.1    SOQ46515.1    AK403244    BAM19655.1    GFTR01005790    JAW10636.1    AB516425    BAH96561.1    AK402698    BAM19320.1    KQ435119    KZC14708.1    QOIP01000006    RLU22088.1    JX846984    AGG55001.1    KQ459053    KPJ04132.1    GDKW01001282    JAI55313.1    GEDC01027694    JAS09604.1    GAHY01000244    JAA77266.1    NEVH01006994    PNF36030.1    AAZX01001202    KQ971354    EFA05913.1    GL442063    EFN63982.1    GANO01001545    JAB58326.1    NNAY01000245    OXU29742.1    GGMS01016917    MBY86120.1    AXCN02000568    LKEY01022044    KYN50547.1    GBHO01031506    GBRD01004592    GDHC01001442    JAG12098.1    JAG61229.1    JAQ17187.1    UFQT01000822    SSX27392.1    KQ977901    KYM98885.1    GGFM01006985    MBW27736.1    DQ440481    ABF18514.1    KZ288310    PBC28595.1    GDAI01002637    JAI14966.1    GGFM01002443    MBW23194.1    ABLF02027851    GGFM01002582    MBW23333.1    GAMD01001374    JAB00217.1    GGFJ01006014    MBW55155.1    GGFK01004566    MBW37887.1    GFDF01002378    JAV11706.1    GGFK01004561    MBW37882.1    GFDF01002377    JAV11707.1    AAAB01008807    EAA04232.2    APCN01003635    CH963913    EDW77408.1    GGFJ01006105    MBW55246.1    ADTU01023023    ADTU01023024    GGFJ01006015    MBW55156.1    KQ981272    KYN43827.1    GL888045    EGI68889.1    ADMH02002207    ETN57809.1    AXCM01006679    GFXV01007549    MBW19354.1    DS231843    EDS35510.1    GFDL01008949    JAV26096.1    KK852527    KDR22017.1    JXUM01045461    KQ561439    KXJ78588.1    JRES01000384    KNC31743.1    GAPW01001820    JAC11778.1    GBXI01004280    JAD10012.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000037510    UP000007151    UP000053240    + More
UP000076502    UP000279307    UP000053268    UP000235965    UP000079169    UP000192223    UP000005203    UP000002358    UP000007266    UP000000311    UP000215335    UP000075884    UP000075886    UP000078492    UP000076408    UP000075920    UP000078542    UP000242457    UP000069272    UP000007819    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000007798    UP000005205    UP000078541    UP000007755    UP000000673    UP000075883    UP000075881    UP000002320    UP000075900    UP000075880    UP000027135    UP000069940    UP000249989    UP000037069   

PRIDE

H9JSZ8    C6L8Q2    A0A088AHJ0   

Pfam

PF00108   Thiolase_N        + More
PF02803   Thiolase_C
PF10545   MADF_DNA_bdg

Interpro

IPR020613   Thiolase_CS        + More
IPR002155   Thiolase       
IPR020610   Thiolase_AS       
IPR020616   Thiolase_N       
IPR016039   Thiolase-like       
IPR020615   Thiolase_acyl_enz_int_AS       
IPR020617   Thiolase_C       
IPR006578   MADF-dom       

SUPFAM

SSF53901   SSF53901       

Gene 3D

3.40.47.10    

CDD

cd00751  thiolase

ProteinModelPortal

H9JSZ8   A0A0P0EA86   A0A2H1W0C5   A0A1V0M8A7   A0A3S2LBN8   A0A2W1BMK7   + More
A0A291P148   A0A291P0Z9   M4M672   A0A2A4JWP2   M4M667   A0A0L7LDR5   A0A088MCZ0   A0A212ELV4   A0A1Q3G5I8   A0A194QVJ5   A0A2W1BK72   A0A1Q3G5J3   A0A2A4JVH8   A0A1L8D6E7   B7XEI5   M4M6W2   A0A088M9J5   A0A2H1W0G0   A0A2A4JUV2   M4M7X3   A0A291P0X8   A0A291P134   A0A0P0E5G4   A0A1V0M8A3   A0A2H1W083   I4DP15   A0A224XDT7   C6L8Q2   I4DN30   A0A154PTM8   A0A3L8DQK3   M4M648   A0A194QF73   A0A0P4VLL1   A0A1B6C846   R4FQS6   A0A2J7R5D0   A0A1S3DBF4   A0A1W4WLY9   A0A1S3DA08   A0A088AHJ0   K7IV43   D6WSI8   E2ARH3   U5EL67   A0A232FGB8   A0A182N7D7   A0A2S2R8V6   A0A182QTK1   A0A151K395   A0A182Y864   A0A0A9X037   A0A336MAM4   A0A182WB89   A0A151IDY0   A0A2M3ZGQ5   Q1HQG3   A0A2A3EA37   A0A182FFL4   A0A0K8TLC7   A0A2M3Z3U7   J9K576   A0A2M3Z4A9   T1DSQ4   A0A2M4BPZ5   A0A2M4AAT1   A0A1L8DZ48   A0A2M4AAZ6   A0A1L8DZ65   A0A182VD17   A0A182U0X2   A0A182X297   A0A182L3Y7   Q7QIF7   A0A182I6F8   B4MZD5   A0A2M4BQ82   A0A158NQB2   A0A2M4BPY8   A0A195FU57   F4WA98   W5J4S4   A0A182MLQ9   A0A2H8TYJ7   A0A182K4B8   B0W5M7   A0A182RUF2   A0A182IJR5   A0A1Q3FEW7   A0A067RE26   A0A182G6S7   A0A0L0CH53   A0A023ERH3   A0A0A1XGB7  

PDB

4C2K     E-value=7.67606e-116,     Score=1067

KEGG

105841738    K07508 acetyl-CoA acyltransferase 2 [EC:2.3.1.16] | (RefSeq) 3-ketoacyl-CoA thiolase, mitochondrial-

PATHWAY

00062    Fatty acid elongation - Bombyx mori (domestic silkworm)
00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
00280    Valine, leucine and isoleucine degradation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016747   GO:0016746   GO:0003985   GO:0003988   GO:0005739   GO:0006635   GO:0008152   GO:0003824   GO:0003676   GO:0016020   GO:0005515   GO:0006811   GO:0005622   GO:0006810  

Length:

400

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15636

Exp number, first 60 AAs:

0.00284

Total prob of N-in:

0.00819

outside

1  -  400

 

 

Pi

179.264384

Theta

156.175129

Tajima's D

0.464844

CLR

0.158243

CSRT

0.503424828758562

Interpretation

Uncertain