Gene

KWMTBOMO11191  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012635

Annotation

PREDICTED:_acyl-CoA-binding_domain-containing_protein_6-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(-):288956-290807      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.609

CDS

ATGGCCAGTACGGCAAGAGCAGCCCGCCTGTATGTAGGCAACCTTGCCTGGACAGTTGGCCATCGACAACTACGAGAATATTTCTCACAATTTGGTCCAGTGCAGAGTGCAAGAGTAGTATTCGATCGATCAACGGGCCTCAGCAAGGGCTACGGTTTCATTGAATTTACTAGTCCCTCAGCTGCAGCTGATGCAACTAATAAGCAGATTCACACACTTGAAGACTATCCAGACTCAGATTTTTCAGATGAAGATCAGTCTCCATTGGACAGCTTGTTCAATAAGGCAGCTGACCATCTTAGAAAGGTTACAAATAAATTAACCAATGGTCAACTTTTGGAGTTGTACGGGTTGTTCAAGCAAGGTACTGAAGGTCAATGCAACACTCCAAAGCCTGGGTGGTTAGATGGTAAAGGACGTAGGAAATGGGAGGCCTGGAAGAATCTTAAAGATATGCCCAGTGAAGAGGCTAAGGAGAAATATATTGCTTTGTTGAAAAAATATGATCCTGACTGGTCAGGTACACCTCAAAAGACAAATATTGATACCAAGGAAACATGGGTAGCTGTCTCATCAATGAGATATTCGCCTGAACCAGACCTCGTGCACAATGAGCTTTCTTTGCTTGATGCAGCCAGAGAAGACTGCGGAGAGCGAGTGAAGGAACTTCTGATCAAGAAGCCGGAATTGAAATATGAGAAAGACGAAGATGGCCTCACTGCACTACACTGGGCTGCTGACAGAAATGCAATTAACGCACTAAGTGCAGCCTTAAGTGGAGGATGTCCTATTGATGCAGTCGATGAATGTGGTCAAACAGCTCTGCATTACGCAGTTTCGTGTGGTCATGTAGAATCAACTAAAATCCTGACGAAAGCTGGAGCTACACTGCTAGAAGACGAGGAAGGTAACACTCCATTAGACCTGGCTACTGATACTGAAATAAAGAAAATTCTGGAAGGTGCTGATTAA

Protein

MASTARAARLYVGNLAWTVGHRQLREYFSQFGPVQSARVVFDRSTGLSKGYGFIEFTSPSAAADATNKQIHTLEDYPDSDFSDEDQSPLDSLFNKAADHLRKVTNKLTNGQLLELYGLFKQGTEGQCNTPKPGWLDGKGRRKWEAWKNLKDMPSEEAKEKYIALLKKYDPDWSGTPQKTNIDTKETWVAVSSMRYSPEPDLVHNELSLLDAAREDCGERVKELLIKKPELKYEKDEDGLTALHWAADRNAINALSAALSGGCPIDAVDECGQTALHYAVSCGHVESTKILTKAGATLLEDEEGNTPLDLATDTEIKKILEGAD

Uniprot

Q2F636   H9JSX3   A0A212ELV6   A0A194QGR6   A0A2A4JVL0   A0A2W1BN01   + More
A0A194QX08   A0A0P0ES45   A0A2H1WQP5   A0A1V0M8C3   A0A0L7LA60   A0A076FRI2   S4PCI0   A0A232EXQ4   J9JWI0   A0A0K8TKW4   E0VH10   A0A0L7QWJ4   E9III5   E2AP48   A0A158P369   D7EHR2   F4W4G0   A0A0L0C3U7   A0A195BHD2   A0A088AIW1   A0A151WYY1   A0A2A3E1M4   A0A195DN57   A0A1A9XKN5   A0A1Y1N5F1   A0A034VTH5   A0A1B0B9N4   A0A0J7KZP9   A0A1L8EDM0   A0A0P4WBC6   A0A1L8EDH3   A0A026VT94   W8B4D6   A0A1B0DJU7   A0A1I8PIB4   K7IWQ5   D3TN15   A0A1B0GAF0   A0A1A9UE52   A0A131YSN7   A0A0K8UAL9   A0A131XEF5   A0A1B6CSJ6   A0A224YSQ3   A0A2P6L6H0   A0A1B6KRR0   A0A1B6GW95   A0A2P8YHE8   A0A023FUT6   A0A1L8DZC9   B3N0G5   A0A1W4VJD7   A0A2C9LV63   L7M793   A0A1A9X392   B4L8N0   A0A1J1IYL3   A0A0D2UEG2   A0A1L8DZB0   A0A2J7QDA3   A0A1L8DZS1   Q9VRG6   A0A182W484   A0A1L8DZB8   A0A0M8ZMX5   A0A067QXF9   A0A1X7V1U3   G3MTS4   A0A1L8DZB9   A0A1L8DZ93   U4V0P5   A0A0C9SDI5   A0A0K8SPJ4   N6U3I2   B3NYC8   A0A1S3JIA3   B4R3Q9   B4I6G2   A0A023GH08   T1HPN9   A0A0B6ZER2   M4WDL3   A0A1I8MRV3   A0A182QXI7   B4M1V6   T1FZF0   A0A3B1IDU4   A0A182MP54   A0A1W4XPV3  

Pubmed

19121390    22118469    26354079    28756777    26445454    28349297    + More
26227816    24817326    23622113    28648823    26369729    20566863    21282665    20798317    21347285    18362917    19820115    21719571    26108605    28004739    25348373    24508170    30249741    24495485    20075255    20353571    26830274    28049606    28797301    29403074    17994087    15562597    25576852    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    22216098    23537049    26131772    26823975    25315136    23254933    25329095   

EMBL

DQ311236    ABD36181.1    BABH01038943    AGBW02013975    OWR42474.1    KQ459053    + More
KPJ04130.1    NWSH01000536    PCG75816.1    KZ150068    PZC74100.1    KQ461073    KPJ09495.1    KT261732    ALJ30272.1    ODYU01010351    SOQ55395.1    KU755523    ARD71233.1    JTDY01002029    KOB72280.1    KF960746    AII21948.1    GAIX01004196    JAA88364.1    NNAY01001690    OXU23214.1    ABLF02035211    GDAI01002805    JAI14798.1    DS235156    EEB12666.1    KQ414716    KOC62904.1    GL763494    EFZ19620.1    GL441452    EFN64784.1    ADTU01007766    DS497665    EFA12151.1    GL887532    EGI70855.1    JRES01000948    KNC26886.1    KQ976467    KYM84179.1    KQ982649    KYQ53098.1    KZ288501    PBC25156.1    KQ980713    KYN14261.1    GEZM01012327    JAV92989.1    GAKP01013223    JAC45729.1    JXJN01010500    LBMM01001806    KMQ95714.1    GFDG01002045    JAV16754.1    GDRN01071628    GDRN01071627    JAI63665.1    GFDG01002032    JAV16767.1    KK108051    QOIP01000001    EZA46957.1    RLU27402.1    GAMC01010589    GAMC01010585    JAB95970.1    AJVK01001088    AAZX01006324    EZ422817    ADD19093.1    CCAG010011420    GEDV01006949    JAP81608.1    GDHF01028688    JAI23626.1    GEFH01003594    JAP64987.1    GEDC01021085    JAS16213.1    GFPF01005726    MAA16872.1    MWRG01001467    PRD34169.1    GEBQ01025849    JAT14128.1    GECZ01003079    JAS66690.1    PYGN01000593    PSN43688.1    GBBL01001749    JAC25571.1    GFDF01002307    JAV11777.1    CH902640    EDV38369.1    GACK01006016    JAA59018.1    CH933815    EDW08005.1    CVRI01000063    CRL04238.1    KE346365    KJE93511.1    GFDF01002310    JAV11774.1    NEVH01015826    PNF26564.1    GFDF01002309    JAV11775.1    AE014298    AY060903    AAF50834.2    AAL28451.1    AAN09671.1    GFDF01002315    JAV11769.1    KQ436026    KOX67550.1    KK853134    KDR10827.1    JO845276    AEO36892.1    GFDF01002308    JAV11776.1    GFDF01002306    JAV11778.1    KB631768    KI210422    ERL86001.1    ERL96256.1    GBZX01001797    JAG90943.1    GBRD01010641    GDHC01019865    JAG55183.1    JAP98763.1    APGK01050964    KB741180    ENN73122.1    CH954180    EDV47607.1    CM000366    EDX18527.1    CH480823    EDW56368.1    GBBM01002259    JAC33159.1    ACPB03000274    HACG01020229    CEK67094.1    KC417415    AGI15432.1    AXCN02002441    CH940651    EDW65660.1    AMQM01001367    KB097495    ESN96232.1    AXCM01013339   

Proteomes

UP000005204    UP000007151    UP000053268    UP000218220    UP000053240    UP000037510    + More
UP000215335    UP000007819    UP000009046    UP000053825    UP000000311    UP000005205    UP000007266    UP000007755    UP000037069    UP000078540    UP000005203    UP000075809    UP000242457    UP000078492    UP000092443    UP000092460    UP000036403    UP000053097    UP000279307    UP000092462    UP000095300    UP000002358    UP000092444    UP000078200    UP000245037    UP000007801    UP000192221    UP000076420    UP000091820    UP000009192    UP000183832    UP000008743    UP000235965    UP000000803    UP000075920    UP000053105    UP000027135    UP000007879    UP000030742    UP000019118    UP000008711    UP000085678    UP000000304    UP000001292    UP000015103    UP000095301    UP000075886    UP000008792    UP000015101    UP000018467    UP000075883    UP000192223   

PRIDE

Q2F636    H9JSX3    Q9VRG6   

Pfam

PF12796   Ank_2        + More
PF00887   ACBP
PF10294   Methyltransf_16
PF00076   RRM_1

Interpro

IPR036770   Ankyrin_rpt-contain_sf        + More
IPR035984   Acyl-CoA-binding_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR000582   Acyl-CoA-binding_protein       
IPR002110   Ankyrin_rpt       
IPR029063   SAM-dependent_MTases       
IPR019410   Methyltransf_16       
IPR035979   RBD_domain_sf       
IPR034152   SLIRP_RRM       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR000504   RRM_dom       
IPR002014   VHS_dom       
IPR022408   Acyl-CoA-binding_prot_CS       

SUPFAM

SSF48403   SSF48403        + More
SSF47027   SSF47027       
SSF53335   SSF53335       
SSF54928   SSF54928       

Gene 3D

1.20.80.10     1.25.40.20     3.30.70.330    

CDD

cd00204  ANK
cd12242  RRM_SLIRP

ProteinModelPortal

Q2F636   H9JSX3   A0A212ELV6   A0A194QGR6   A0A2A4JVL0   A0A2W1BN01   + More
A0A194QX08   A0A0P0ES45   A0A2H1WQP5   A0A1V0M8C3   A0A0L7LA60   A0A076FRI2   S4PCI0   A0A232EXQ4   J9JWI0   A0A0K8TKW4   E0VH10   A0A0L7QWJ4   E9III5   E2AP48   A0A158P369   D7EHR2   F4W4G0   A0A0L0C3U7   A0A195BHD2   A0A088AIW1   A0A151WYY1   A0A2A3E1M4   A0A195DN57   A0A1A9XKN5   A0A1Y1N5F1   A0A034VTH5   A0A1B0B9N4   A0A0J7KZP9   A0A1L8EDM0   A0A0P4WBC6   A0A1L8EDH3   A0A026VT94   W8B4D6   A0A1B0DJU7   A0A1I8PIB4   K7IWQ5   D3TN15   A0A1B0GAF0   A0A1A9UE52   A0A131YSN7   A0A0K8UAL9   A0A131XEF5   A0A1B6CSJ6   A0A224YSQ3   A0A2P6L6H0   A0A1B6KRR0   A0A1B6GW95   A0A2P8YHE8   A0A023FUT6   A0A1L8DZC9   B3N0G5   A0A1W4VJD7   A0A2C9LV63   L7M793   A0A1A9X392   B4L8N0   A0A1J1IYL3   A0A0D2UEG2   A0A1L8DZB0   A0A2J7QDA3   A0A1L8DZS1   Q9VRG6   A0A182W484   A0A1L8DZB8   A0A0M8ZMX5   A0A067QXF9   A0A1X7V1U3   G3MTS4   A0A1L8DZB9   A0A1L8DZ93   U4V0P5   A0A0C9SDI5   A0A0K8SPJ4   N6U3I2   B3NYC8   A0A1S3JIA3   B4R3Q9   B4I6G2   A0A023GH08   T1HPN9   A0A0B6ZER2   M4WDL3   A0A1I8MRV3   A0A182QXI7   B4M1V6   T1FZF0   A0A3B1IDU4   A0A182MP54   A0A1W4XPV3  

PDB

2COP     E-value=1.37956e-16,     Score=210

KEGG

693090    no KO assigned | (RefSeq) acyl-CoA-binding domain-containing protein 6-like

GO

GO:0000062   GO:0003723   GO:0006886   GO:0005623   GO:0003676   GO:0016021   GO:0005515   GO:0000166   GO:0016020   GO:0006811   GO:0005622   GO:0006810   GO:0003824  

Length:

323

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03863

Exp number, first 60 AAs:

0.03817

Total prob of N-in:

0.05262

outside

1  -  323

 

 

Pi

309.652479

Theta

213.160734

Tajima's D

1.381402

CLR

0.00153

CSRT

0.76101194940253

Interpretation

Uncertain